HL_9F58_050

3D structure

PDB id

9F58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Gcn2 dimer bound to the 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAGUAACUAUGACUC

Length

15 nucleotides

Bulged bases

9F58|1|a|A|2256, 9F58|1|a|U|2264

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F58|1|a|G|2251
9F58|1|a|A|2252
9F58|1|a|G|2253
9F58|1|a|U|2254
9F58|1|a|A|2255
9F58|1|a|A|2256
9F58|1|a|C|2257
9F58|1|a|U|2258
9F58|1|a|A|2259
9F58|1|a|U|2260
9F58|1|a|G|2261
9F58|1|a|A|2262
9F58|1|a|C|2263
9F58|1|a|U|2264
9F58|1|a|C|2265

Current chains

Chain a

25S rRNA

Nearby chains

Chain A

eIF-2-alpha kinase GCN2

Chain H

eIF-2-alpha kinase GCN2

Chain I

eIF-2-alpha kinase GCN2