9F58 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_9F58_001 | 1/4/47:56 | No text annotation | homologous HL_8P9A_186 HL_17803.1 | |
| HL_9F58_002 | 1/4/69:89 | No text annotation | homologous HL_8P9A_187 HL_68571.1 | |
| HL_9F58_003 | 1/4/108:114 | No text annotation | homologous HL_8CRE_076 NA | |
| HL_9F58_004 | 1/4/124:129 | No text annotation | homologous HL_8P9A_189 HL_79745.1 | |
| HL_9F58_005 | 1/a/38:45 | No text annotation | homologous HL_8P9A_113 HL_48677.1 | |
| HL_9F58_006 | 1/a/69:74 | No text annotation | homologous HL_8P9A_114 HL_51020.1 | |
| HL_9F58_007 | 1/a/90:96 | No text annotation | homologous HL_8CRE_003 NA | |
| HL_9F58_008 | 1/a/132:136 | No text annotation | homologous HL_8CRE_004 NA | |
| HL_9F58_009 | 1/a/194:201 | T-loop with 1 bulged base | homologous HL_8P9A_117 HL_13999.1 | |
| HL_9F58_010 | 1/a/208:212 | No text annotation | geometric HL_8P9A_118 HL_75660.6 | |
| HL_9F58_011 | 1/a/216:224 | T-loop with unstacked turn | homologous HL_8CRE_007 NA | |
| HL_9F58_012 | 1/a/278:287 | T-loop related | homologous HL_8P9A_120 HL_63894.1 | |
| HL_9F58_013 | 1/a/303:312 | No text annotation | homologous HL_8CRE_009 NA | |
| HL_9F58_014 | 1/a/357:362 | GNRA | homologous HL_8P9A_122 HL_34789.1 | |
| HL_9F58_015 | 1/a/382:387 | GNRA | homologous HL_8CRE_011 NA | |
| HL_9F58_016 | 1/a/544:547 | No text annotation | ||
| HL_9F58_017 | 1/a/599:604 | GNRA | homologous HL_8P9A_125 HL_34789.1 | |
| HL_9F58_018 | 1/a/640:649 | T-loop with 2 stacked bulged bases | homologous HL_8P9A_126 HL_33597.1 | |
| HL_9F58_019 | 1/a/686:694 | No text annotation | homologous HL_8CRE_014 NA | |
| HL_9F58_020 | 1/a/707:712 | GNRA | homologous HL_8P9A_128 HL_34789.1 | |
| HL_9F58_021 | 1/a/732:737 | GNRA | homologous HL_8P9A_129 HL_34789.1 | |
| HL_9F58_022 | 1/a/763:768 | No text annotation | homologous HL_8CRE_017 NA | |
| HL_9F58_023 | 1/a/844:849 | GNRA | homologous HL_8P9A_131 HL_34789.1 | |
| HL_9F58_024 | 1/a/876:885 | No text annotation | homologous HL_8CRE_019 NA | |
| HL_9F58_025 | 1/a/910:918 | No text annotation | homologous HL_8P9A_133 HL_79004.1 | |
| HL_9F58_026 | 1/a/958:963 | No text annotation | homologous HL_8P9A_134 HL_27530.1 | |
| HL_9F58_027 | 1/a/1076:1083 | T-loop related | homologous HL_8P9A_136 HL_63894.1 | |
| HL_9F58_028 | 1/a/1126:1132 | GNRA | homologous HL_8CRE_024 NA | |
| HL_9F58_029 | 1/a/1148:1155 | No text annotation | homologous HL_8P9A_138 HL_47171.1 | |
| HL_9F58_030 | 1/a/1239:1249 | No text annotation | ||
| HL_9F58_031 | 1/a/1267:1274 | GNRA wlth tandem sheared | homologous HL_8P9A_140 HL_98423.1 | |
| HL_9F58_032 | 1/a/1347:1357 | No text annotation | homologous HL_8P9A_141 HL_29762.1 | |
| HL_9F58_033 | 1/a/1403:1408 | GNRA | homologous HL_8CRE_029 NA | |
| HL_9F58_034 | 1/a/1462:1470 | T-loop with 2 stacked bulged bases | homologous HL_8CRE_030 NA | |
| HL_9F58_035 | 1/a/1506:1512 | Pseudoknot geometry with 3' bulge | homologous HL_8CRE_031 NA | |
| HL_9F58_036 | 1/a/1544:1549 | GNRA variation | homologous HL_8CRE_032 NA | |
| HL_9F58_037 | 1/a/1599:1608 | No text annotation | homologous HL_8P9A_146 HL_77449.1 | |
| HL_9F58_038 | 1/a/1634:1639 | GNRA | homologous HL_8CRE_035 NA | |
| HL_9F58_039 | 1/a/1680:1688 | Pseudoknot geometry | homologous HL_8CRE_036 NA | |
| HL_9F58_040 | 1/a/1719:1725 | No text annotation | homologous HL_8P9A_149 HL_97067.1 | |
| HL_9F58_041 | 1/a/1759:1766 | No text annotation | homologous HL_8P9A_150 HL_68791.1 | |
| HL_9F58_042 | 1/a/1792:1796 | Mini UNCG | homologous HL_8P9A_151 HL_90436.1 | |
| HL_9F58_043 | 1/a/1844:1851 | No text annotation | homologous HL_8P9A_152 HL_28592.1 | |
| HL_9F58_044 | 1/a/1862:1868 | GNRA | homologous HL_8P9A_153 HL_34789.1 | |
| HL_9F58_045 | 1/a/1923:1928 | UNCG | homologous HL_8CRE_042 NA | |
| HL_9F58_046 | 1/a/2110:2114 | No text annotation | homologous HL_8P9A_156 HL_16651.1 | |
| HL_9F58_047 | 1/a/2135:2145 | No text annotation | homologous HL_8P9A_157 HL_87681.1 | |
| HL_9F58_048 | 1/a/2164:2170 | GNRA | homologous HL_8CRE_045 NA | |
| HL_9F58_049 | 1/a/2220:2225 | GNRA | homologous HL_8P9A_159 HL_34789.1 | |
| HL_9F58_050 | 1/a/2251:2265 | No text annotation | ||
| HL_9F58_051 | 1/a/2292:2300 | No text annotation | homologous HL_8CRE_048 NA | |
| HL_9F58_052 | 1/a/2369:2378 | No text annotation | homologous HL_8P9A_162 HL_78372.1 | |
| HL_9F58_053 | 1/a/2534:2545 | No text annotation | ||
| HL_9F58_054 | 1/a/2568:2573 | No text annotation | ||
| HL_9F58_055 | 1/a/2616:2624 | No text annotation | homologous HL_8CRE_053 NA | |
| HL_9F58_056 | 1/a/2633:2645 | No text annotation | homologous HL_8P9A_166 HL_02042.1 | |
| HL_9F58_057 | 1/a/2673:2681 | No text annotation | homologous HL_8CRE_055 NA | |
| HL_9F58_058 | 1/a/2693:2700 | Pseudoknot geometry | homologous HL_8P9A_168 HL_52651.1 | |
| HL_9F58_059 | 1/a/2724:2732 | No text annotation | homologous HL_8CRE_057 NA | |
| HL_9F58_060 | 1/a/2744:2749 | GNRA | homologous HL_8P9A_170 HL_34789.1 | |
| HL_9F58_061 | 1/a/2776:2784 | Pseudoknot geometry | homologous HL_8P9A_171 HL_52651.1 | |
| HL_9F58_062 | 1/a/2840:2848 | No text annotation | homologous HL_8P9A_172 HL_52011.1 | |
| HL_9F58_063 | 1/a/2897:2904 | GNRA variation | homologous HL_8P9A_173 HL_46665.1 | |
| HL_9F58_064 | 1/a/2920:2926 | No text annotation | homologous HL_8CRE_062 NA | |
| HL_9F58_065 | 1/a/2963:2968 | GNRA | homologous HL_8CRE_063 NA | |
| HL_9F58_066 | 1/a/3025:3030 | GNRA | homologous HL_8P9A_176 HL_34789.1 | |
| HL_9F58_067 | 1/a/3068:3073 | No text annotation | homologous HL_8P9A_177 HL_12125.1 | |
| HL_9F58_068 | 1/a/3110:3124 | No text annotation | homologous HL_8CRE_066 NA | |
| HL_9F58_069 | 1/a/3194:3197 | Mini UNCG | geometric HL_4V9F_021 HL_90436.1 | |
| HL_9F58_070 | 1/a/3240:3247 | No text annotation | homologous HL_8P9A_180 HL_31089.1 | |
| HL_9F58_071 | 1/a/3303:3311 | No text annotation | homologous HL_8CRE_069 NA | |
| HL_9F58_072 | 1/a/3349:3356 | No text annotation | ||
| HL_9F58_073 | 1/b/32:45 | No text annotation | geometric HL_8P9A_183 HL_01182.1 | |
| HL_9F58_074 | 1/b/36:41 | No text annotation | homologous HL_8OI5_069 HL_59381.1 | |
| HL_9F58_075 | 1/b/88:93 | GNRA | homologous HL_8OI5_070 HL_34789.1 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_9F58_001 | 1/4/13:19, 1/a/404:410 | No text annotation | geometric IL_8P9A_244 IL_22311.1 | |
| IL_9F58_002 | 1/4/25:26, 1/a/337:339 | Single bulged A | geometric IL_8P9A_242 IL_14190.1 | |
| IL_9F58_003 | 1/4/64:66, 1/4/93:96 | Isolated non-canonical cWW with bulges | homologous IL_8P9A_371 IL_68118.1 | |
| IL_9F58_004 | 1/4/68:69, 1/4/89:91 | Single bulged U | homologous IL_8P9A_372 IL_97561.1 | |
| IL_9F58_005 | 1/4/144:145, 1/a/13:15 | Single bulged U | geometric IL_8P9A_232 IL_97561.1 | |
| IL_9F58_006 | 1/4/150:152, 1/a/7:8 | Single bulged C | geometric IL_8P9A_231 IL_05642.1 | |
| IL_9F58_007 | 1/a/27:28, 1/a/56:58 | Single stack bend | homologous IL_8CRE_004 NA | |
| IL_9F58_008 | 1/a/31:38, 1/a/45:53 | tSH-tHW-tHH-tHS | homologous IL_8CRE_005 NA | |
| IL_9F58_009 | 1/a/82:89, 1/a/97:103 | 8x7 Sarcin-Ricin; G-bulge | homologous IL_8P9A_235 IL_53348.1 | |
| IL_9F58_010 | 1/a/123:124, 1/a/144:149 | No text annotation | homologous IL_8P9A_236 IL_10396.1 | |
| IL_9F58_011 | 1/a/125:127, 1/a/141:143 | Isolated non-canonical cWW pair | homologous IL_8CRE_008 NA | |
| IL_9F58_012 | 1/a/163:165, 1/a/257:258 | Single stack bend | homologous IL_8P9A_238 IL_15011.1 | |
| IL_9F58_013 | 1/a/169:170, 1/a/248:253 | No text annotation | ||
| IL_9F58_014 | 1/a/177:178, 1/a/238:241 | No text annotation | ||
| IL_9F58_015 | 1/a/189:191, 1/a/204:205 | No text annotation | homologous IL_8CRE_013 NA | |
| IL_9F58_016 | 1/a/376:379, 1/a/390:403 | No text annotation | homologous IL_8CRE_015 NA | |
| IL_9F58_017 | 1/a/429:431, 1/a/628:630 | Isolated non-canonical cWW pair | homologous IL_8P9A_245 IL_71625.1 | |
| IL_9F58_018 | 1/a/512:513, 1/a/577:579 | Single bulged A | homologous IL_8P9A_246 IL_14190.1 | |
| IL_9F58_019 | 1/a/517:525, 1/a/567:573 | No text annotation | homologous IL_8P9A_247 IL_52712.1 | |
| IL_9F58_020 | 1/a/531:538, 1/a/553:561 | No text annotation | homologous IL_8P9A_248 IL_25001.1 | |
| IL_9F58_021 | 1/a/668:670, 1/a/792:794 | Isolated non-canonical cWW pair | homologous IL_8CRE_023 NA | |
| IL_9F58_022 | 1/a/680:684, 1/a/696:700 | No text annotation | homologous IL_8P9A_250 IL_87030.1 | |
| IL_9F58_023 | 1/a/725:728, 1/a/741:745 | UAA/GAN variation | homologous IL_8P9A_251 IL_45790.1 | |
| IL_9F58_024 | 1/a/752:753, 1/a/779:781 | Single bulged A | homologous IL_8P9A_252 IL_14190.1 | |
| IL_9F58_025 | 1/a/755:756, 1/a/775:777 | No text annotation | homologous IL_8CRE_027 NA | |
| IL_9F58_026 | 1/a/758:763, 1/a/768:773 | No text annotation | homologous IL_8P9A_254 IL_57885.1 | |
| IL_9F58_027 | 1/a/803:805, 1/a/938:940 | Isolated non-canonical cWW pair | homologous IL_8P9A_255 IL_01003.1 | |
| IL_9F58_028 | 1/a/805:809, 1/a/931:938 | No text annotation | homologous IL_8P9A_256 IL_73855.1 | |
| IL_9F58_029 | 1/a/833:834, 1/a/859:861 | No text annotation | homologous IL_8CRE_032 NA | |
| IL_9F58_030 | 1/a/834:838, 1/a/855:859 | Triple sheared | homologous IL_8P9A_258 IL_15190.1 | |
| IL_9F58_031 | 1/a/869:872, 1/a/888:890 | No text annotation | homologous IL_8P9A_259 IL_36931.1 | |
| IL_9F58_032 | 1/a/873:875, 1/a/886:887 | Single bulged U | homologous IL_8P9A_260 IL_97561.1 | |
| IL_9F58_033 | 1/a/907:909, 1/a/919:923 | No text annotation | homologous IL_8CRE_036 NA | |
| IL_9F58_034 | 1/a/954:956, 1/a/965:967 | Isolated non-canonical cWW pair | homologous IL_8P9A_262 IL_71625.1 | |
| IL_9F58_035 | 1/a/969:970, 1/a/1111:1113 | Single stack bend | homologous IL_8P9A_263 IL_15011.1 | |
| IL_9F58_036 | 1/a/977:981, 1/a/1102:1104 | No text annotation | homologous IL_8P9A_264 IL_25463.2 | |
| IL_9F58_037 | 1/a/983:985, 1/a/1099:1100 | Single bulged G | homologous IL_8P9A_265 IL_28408.1 | |
| IL_9F58_038 | 1/a/991:997, 1/a/1052:1058 | 7x7 Sarcin-Ricin with intercalated A; G-bulge | homologous IL_8P9A_266 IL_94128.1 | |
| IL_9F58_039 | 1/a/997:998, 1/a/1050:1052 | Minor groove platform | homologous IL_8P9A_267 IL_34520.1 | |
| IL_9F58_040 | 1/a/999:1004, 1/a/1046:1049 | C-loop with bulged stacked A's | homologous IL_8CRE_043 NA | |
| IL_9F58_041 | 1/a/1006:1009, 1/a/1041:1044 | Tandem non-canonical cWW pairs | homologous IL_8CRE_044 NA | |
| IL_9F58_042 | 1/a/1009:1011, 1/a/1039:1041 | Isolated non-canonical cWW pair | homologous IL_8P9A_270 IL_01003.1 | |
| IL_9F58_043 | 1/a/1014:1019, 1/a/1034:1036 | No text annotation | ||
| IL_9F58_044 | 1/a/1069:1071, 1/a/1087:1089 | Isolated non-canonical cWW pair | homologous IL_8CRE_047 NA | |
| IL_9F58_045 | 1/a/1074:1076, 1/a/1083:1084 | Single bulged A | homologous IL_8P9A_273 IL_14190.1 | |
| IL_9F58_046 | 1/a/1120:1122, 1/a/1136:1138 | Isolated non-canonical cWW pair | homologous IL_8CRE_049 NA | |
| IL_9F58_047 | 1/a/1167:1171, 1/a/1328:1332 | UAA/GAN | homologous IL_8CRE_051 NA | |
| IL_9F58_048 | 1/a/1173:1180, 1/a/1325:1326 | SSU/LSU pseudoknot | homologous IL_8P9A_277 IL_07396.1 | |
| IL_9F58_049 | 1/a/1180:1182, 1/a/1324:1325 | Single bulged U | homologous IL_8P9A_278 IL_97561.1 | |
| IL_9F58_050 | 1/a/1187:1194, 1/a/1314:1319 | No text annotation | homologous IL_8P9A_279 IL_39054.1 | |
| IL_9F58_051 | 1/a/1194:1205, 1/a/1299:1314 | No text annotation | homologous IL_8P9A_280 IL_34501.1 | |
| IL_9F58_052 | 1/a/1207:1209, 1/a/1296:1297 | No text annotation | homologous IL_8CRE_056 NA | |
| IL_9F58_053 | 1/a/1218:1226, 1/a/1283:1287 | Kink-turn | homologous IL_8CRE_057 NA | |
| IL_9F58_054 | 1/a/1262:1266, 1/a/1275:1277 | No text annotation | homologous IL_8CRE_059 NA | |
| IL_9F58_055 | 1/a/1376:1378, 1/a/1428:1431 | No text annotation | homologous IL_8P9A_285 IL_42997.4 | |
| IL_9F58_056 | 1/a/1385:1387, 1/a/1420:1421 | Single bulged A | homologous IL_8P9A_286 IL_14190.1 | |
| IL_9F58_057 | 1/a/1388:1395, 1/a/1415:1419 | Kink-turn | homologous IL_8P9A_287 IL_90775.1 | |
| IL_9F58_058 | 1/a/1398:1400, 1/a/1411:1412 | Single bulged A | homologous IL_8P9A_288 IL_14190.1 | |
| IL_9F58_059 | 1/a/1444:1450, 1/a/2354:2359 | 7x6 Sarcin-Ricin; G-bulge | homologous IL_8P9A_289 IL_02666.1 | |
| IL_9F58_060 | 1/a/1501:1505, 1/a/1513:1515 | C-loop | homologous IL_8P9A_290 IL_63596.12 | |
| IL_9F58_061 | 1/a/1532:1536, 1/a/1585:1590 | UAA/GAN | homologous IL_8CRE_067 NA | |
| IL_9F58_062 | 1/a/1537:1542, 1/a/1551:1584 | No text annotation | ||
| IL_9F58_063 | 1/a/1618:1621, 1/a/1824:1826 | No text annotation | homologous IL_8CRE_069 NA | |
| IL_9F58_064 | 1/a/1623:1624, 1/a/1819:1822 | No text annotation | homologous IL_8CRE_070 NA | |
| IL_9F58_065 | 1/a/1627:1631, 1/a/1811:1816 | No text annotation | homologous IL_8CRE_071 NA | |
| IL_9F58_066 | 1/a/1645:1649, 1/a/1806:1810 | Triple sheared | homologous IL_8CRE_072 NA | |
| IL_9F58_067 | 1/a/1661:1663, 1/a/1786:1788 | Isolated non-canonical cWW pair | homologous IL_8CRE_073 NA | |
| IL_9F58_068 | 1/a/1669:1670, 1/a/1778:1780 | No text annotation | homologous IL_8CRE_074 NA | |
| IL_9F58_069 | 1/a/1670:1671, 1/a/1776:1778 | Single stack bend | homologous IL_8CRE_075 NA | |
| IL_9F58_070 | 1/a/1694:1698, 1/a/1747:1752 | No text annotation | homologous IL_8CRE_076 NA | |
| IL_9F58_071 | 1/a/1702:1707, 1/a/1737:1743 | No text annotation | homologous IL_8P9A_300 IL_00680.1 | |
| IL_9F58_072 | 1/a/1711:1717, 1/a/1727:1733 | No text annotation | homologous IL_8P9A_301 IL_93476.1 | |
| IL_9F58_073 | 1/a/1883:1889, 1/a/2346:2349 | No text annotation | homologous IL_8CRE_079 NA | |
| IL_9F58_074 | 1/a/1895:1897, 1/a/2338:2340 | No text annotation | homologous IL_8P9A_303 IL_10432.1 | |
| IL_9F58_075 | 1/a/1898:1901, 1/a/2336:2337 | Major groove platform; stack outside cWW | geometric IL_8P9A_304 IL_74641.1 | |
| IL_9F58_076 | 1/a/1898:1906, 1/a/2333:2337 | No text annotation | geometric IL_8P9A_305 IL_80252.1 | |
| IL_9F58_077 | 1/a/1901:1906, 1/a/2333:2336 | No text annotation | homologous IL_8P9A_306 IL_28217.1 | |
| IL_9F58_078 | 1/a/1918:1923, 1/a/1928:1934 | No text annotation | homologous IL_8CRE_084 NA | |
| IL_9F58_079 | 1/a/1940:1942, 1/a/2106:2108 | Isolated non-canonical cWW pair | homologous IL_8CRE_085 NA | |
| IL_9F58_080 | 1/a/1947:1948, 1/a/2098:2101 | No text annotation | homologous IL_8P9A_309 IL_18824.1 | |
| IL_9F58_081 | 1/a/2128:2129, 1/a/2323:2325 | Single bulged A | homologous IL_8CRE_087 NA | |
| IL_9F58_082 | 1/a/2156:2161, 1/a/2173:2180 | No text annotation | homologous IL_8CRE_088 NA | |
| IL_9F58_083 | 1/a/2196:2199, 1/a/2245:2246 | Minor groove platform, major groove intercalation | homologous IL_8P9A_312 IL_73108.1 | |
| IL_9F58_084 | 1/a/2200:2201, 1/a/2241:2244 | Major groove intercalation | homologous IL_8P9A_313 IL_71421.1 | |
| IL_9F58_085 | 1/a/2204:2206, 1/a/2237:2238 | Single bulged U | homologous IL_8P9A_314 IL_97561.1 | |
| IL_9F58_086 | 1/a/2206:2210, 1/a/2235:2237 | No text annotation | homologous IL_8P9A_315 IL_75527.1 | |
| IL_9F58_087 | 1/a/2211:2217, 1/a/2228:2234 | No text annotation | homologous IL_8P9A_316 IL_65359.1 | |
| IL_9F58_088 | 1/a/2276:2277, 1/a/2307:2310 | No text annotation | geometric IL_8P9A_317 IL_24886.1 | |
| IL_9F58_089 | 1/a/2277:2288, 1/a/2304:2307 | No text annotation | homologous IL_8CRE_095 NA | |
| IL_9F58_090 | 1/a/2391:2394, 1/a/2986:2988 | No text annotation | homologous IL_8P9A_319 IL_75527.1 | |
| IL_9F58_091 | 1/a/2396:2398, 1/a/2981:2984 | No text annotation | homologous IL_8CRE_097 NA | |
| IL_9F58_092 | 1/a/2409:2411, 1/a/2811:2812 | Single bulged U | homologous IL_8P9A_321 IL_97561.1 | |
| IL_9F58_093 | 1/a/2412:2413, 1/a/2807:2810 | Minor groove platform | homologous IL_8CRE_099 NA | |
| IL_9F58_094 | 1/a/2423:2425, 1/a/2604:2607 | No text annotation | homologous IL_8CRE_100 NA | |
| IL_9F58_095 | 1/a/2439:2441, 1/a/2505:2508 | No text annotation | geometric IL_7KJT_002 IL_32983.1 | |
| IL_9F58_096 | 1/a/2520:2526, 1/a/2584:2587 | No text annotation | homologous IL_8P9A_324 IL_52092.1 | |
| IL_9F58_097 | 1/a/2614:2615, 1/a/2625:2627 | Single bulged A | homologous IL_8P9A_325 IL_14190.1 | |
| IL_9F58_098 | 1/a/2666:2668, 1/a/2686:2690 | No text annotation | homologous IL_8P9A_326 IL_14250.1 | |
| IL_9F58_099 | 1/a/2718:2721, 1/a/2735:2738 | Tandem non-canonical cWW pairs | homologous IL_8P9A_327 IL_15225.1 | |
| IL_9F58_100 | 1/a/2770:2773, 1/a/2787:2788 | No text annotation | homologous IL_8CRE_110 NA | |
| IL_9F58_101 | 1/a/2823:2826, 1/a/2863:2867 | No text annotation | homologous IL_8CRE_111 NA | |
| IL_9F58_102 | 1/a/2826:2828, 1/a/2862:2863 | No text annotation | homologous IL_8P9A_331 IL_46637.1 | |
| IL_9F58_103 | 1/a/2828:2830, 1/a/2858:2862 | No text annotation | homologous IL_8CRE_113 NA | |
| IL_9F58_104 | 1/a/2835:2839, 1/a/2849:2853 | Double sheared with non-canonical cWW | homologous IL_8CRE_114 NA | |
| IL_9F58_105 | 1/a/2876:2877, 1/a/2949:2951 | No text annotation | homologous IL_8CRE_115 NA | |
| IL_9F58_106 | 1/a/2879:2881, 1/a/2943:2947 | Isolated non-canonical cWW with bulges | homologous IL_8P9A_335 IL_68118.1 | |
| IL_9F58_107 | 1/a/2881:2882, 1/a/2940:2943 | No text annotation | homologous IL_8CRE_117 NA | |
| IL_9F58_108 | 1/a/2889:2891, 1/a/2912:2914 | Isolated non-canonical cWW pair | geometric IL_8P9A_337 IL_01003.1 | |
| IL_9F58_109 | 1/a/2889:2892, 1/a/2909:2914 | No text annotation | geometric IL_8P9A_338 IL_07469.3 | |
| IL_9F58_110 | 1/a/2891:2892, 1/a/2909:2912 | No text annotation | homologous IL_8P9A_339 IL_94991.1 | |
| IL_9F58_111 | 1/a/2918:2920, 1/a/2926:2928 | Isolated non-canonical cWW pair | homologous IL_8P9A_340 IL_01003.1 | |
| IL_9F58_112 | 1/a/2960:2961, 1/a/2970:2972 | Single bulged A | homologous IL_8P9A_341 IL_14190.1 | |
| IL_9F58_113 | 1/a/3004:3007, 1/a/3139:3144 | Double sheared | homologous IL_8P9A_342 IL_58355.1 | |
| IL_9F58_114 | 1/a/3012:3014, 1/a/3040:3042 | Isolated non-canonical cWW pair | homologous IL_8CRE_124 NA | |
| IL_9F58_115 | 1/a/3018:3025, 1/a/3030:3036 | 8x7 Sarcin-Ricin; G-bulge | homologous IL_8P9A_344 IL_62167.1 | |
| IL_9F58_116 | 1/a/3047:3051, 1/a/3091:3094 | No text annotation | homologous IL_8P9A_345 IL_06671.1 | |
| IL_9F58_117 | 1/a/3054:3059, 1/a/3084:3088 | No text annotation | homologous IL_8P9A_346 IL_98200.1 | |
| IL_9F58_118 | 1/a/3063:3064, 1/a/3077:3080 | No text annotation | homologous IL_8CRE_128 NA | |
| IL_9F58_119 | 1/a/3103:3107, 1/a/3127:3131 | UAA/GAN | homologous IL_8CRE_129 NA | |
| IL_9F58_120 | 1/a/3164:3166, 1/a/3284:3286 | Isolated non-canonical cWW pair | homologous IL_8CRE_130 NA | |
| IL_9F58_121 | 1/a/3168:3170, 1/a/3280:3282 | Isolated non-canonical cWW pair | homologous IL_8P9A_350 IL_01003.1 | |
| IL_9F58_122 | 1/a/3177:3179, 1/a/3210:3211 | Single bulged A | homologous IL_8P9A_351 IL_14190.1 | |
| IL_9F58_123 | 1/a/3179:3188, 1/a/3204:3210 | No text annotation | homologous IL_8P9A_352 IL_28855.1 | |
| IL_9F58_124 | 1/a/3193:3194, 1/a/3197:3199 | Single bulged U | geometric IL_5J7L_298 NA | |
| IL_9F58_125 | 1/a/3225:3229, 1/a/3258:3260 | No text annotation | homologous IL_8CRE_133 NA | |
| IL_9F58_126 | 1/a/3233:3235, 1/a/3252:3254 | Isolated non-canonical cWW pair | homologous IL_8P9A_354 IL_01003.1 | |
| IL_9F58_127 | 1/a/3235:3238, 1/a/3249:3252 | Tandem non-canonical cWW pairs | homologous IL_8P9A_355 IL_71194.1 | |
| IL_9F58_128 | 1/a/3300:3303, 1/a/3311:3314 | Tandem non-canonical cWW pairs | homologous IL_8CRE_135 NA | |
| IL_9F58_129 | 1/a/3318:3320, 1/a/3387:3388 | Single bulged U | homologous IL_8P9A_357 IL_97561.1 | |
| IL_9F58_130 | 1/a/3324:3325, 1/a/3381:3383 | No text annotation | homologous IL_8CRE_137 NA | |
| IL_9F58_131 | 1/a/3328:3330, 1/a/3373:3378 | No text annotation | homologous IL_8P9A_359 IL_00086.1 | |
| IL_9F58_132 | 1/a/3332:3337, 1/a/3367:3371 | No text annotation | homologous IL_8P9A_360 IL_48489.1 | |
| IL_9F58_133 | 1/a/3340:3342, 1/a/3363:3364 | No text annotation | homologous IL_8CRE_140 NA | |
| IL_9F58_134 | 1/a/3342:3345, 1/a/3360:3363 | Double sheared; A in syn | homologous IL_8P9A_362 IL_58355.1 | |
| IL_9F58_135 | 1/b/15:16, 1/b/63:65 | Single bulged A | homologous IL_8P9A_364 IL_14190.1 | |
| IL_9F58_136 | 1/b/21:27, 1/b/53:58 | No text annotation | homologous IL_8P9A_365 IL_41504.1 | |
| IL_9F58_137 | 1/b/28:29, 1/b/49:52 | No text annotation | homologous IL_8OI5_136 IL_87975.1 | |
| IL_9F58_138 | 1/b/29:30, 1/b/47:49 | Single stack bend | homologous IL_8OI5_137 IL_15011.1 | |
| IL_9F58_139 | 1/b/32:36, 1/b/41:45 | No text annotation | homologous IL_8P9A_368 IL_58103.12 | |
| IL_9F58_140 | 1/b/72:80, 1/b/100:106 | 8x7 Sarcin-Ricin; G-bulge | homologous IL_8P9A_369 IL_62167.1 | |
| IL_9F58_141 | 1/b/84:87, 1/b/94:96 | Isolated non-canonical cWW pair | homologous IL_8OI5_140 IL_01003.1 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_9F58_001 | 1/4/19:20, 1/a/369:376, 1/a/403:404 | No text annotation | geometric J3_8P9A_046 J3_68715.1 | |
| J3_9F58_002 | 1/4/19:20, 1/a/369:379, 1/a/390:404 | No text annotation | geometric J3_8P9A_047 J3_17917.1 | |
| J3_9F58_003 | 1/4/21:24, 1/a/340:356, 1/a/363:368 | No text annotation | geometric J3_8P9A_045 J3_07616.1 | |
| J3_9F58_004 | 1/4/44:45, 1/4/58:64, 1/4/96:100 | No text annotation | homologous J3_8P9A_067 J3_01004.1 | |
| J3_9F58_005 | 1/a/113:123, 1/a/149:158, 1/a/263:267 | No text annotation | homologous J3_8CRE_001 NA | |
| J3_9F58_006 | 1/a/113:124, 1/a/144:158, 1/a/263:267 | No text annotation | ||
| J3_9F58_007 | 1/a/185:189, 1/a/205:214, 1/a/226:231 | No text annotation | homologous J3_8P9A_044 J3_97456.1 | |
| J3_9F58_008 | 1/a/502:503, 1/a/588:597, 1/a/606:611 | No text annotation | homologous J3_8P9A_048 J3_86133.1 | |
| J3_9F58_009 | 1/a/814:820, 1/a/905:907, 1/a/923:926 | No text annotation | homologous J3_8P9A_049 J3_46658.1 | |
| J3_9F58_010 | 1/a/828:831, 1/a/863:867, 1/a/892:897 | No text annotation | homologous J3_8P9A_050 J3_21998.1 | |
| J3_9F58_011 | 1/a/986:987, 1/a/1062:1066, 1/a/1092:1098 | No text annotation | homologous J3_8P9A_051 J3_84137.1 | |
| J3_9F58_012 | 1/a/1230:1238, 1/a/1250:1262, 1/a/1277:1279 | No text annotation | ||
| J3_9F58_013 | 1/a/1230:1238, 1/a/1250:1266, 1/a/1275:1279 | No text annotation | ||
| J3_9F58_014 | 1/a/1479:1485, 1/a/1857:1859, 1/a/1871:1874 | No text annotation | homologous J3_8CRE_013 NA | |
| J3_9F58_015 | 1/a/1488:1491, 1/a/1837:1843, 1/a/1852:1854 | No text annotation | homologous J3_8P9A_054 J3_76012.1 | |
| J3_9F58_016 | 1/a/1526:1531, 1/a/1591:1595, 1/a/1612:1613 | No text annotation | homologous J3_8CRE_015 NA | |
| J3_9F58_017 | 1/a/1631:1632, 1/a/1641:1645, 1/a/1810:1811 | No text annotation | homologous J3_8CRE_017 NA | |
| J3_9F58_018 | 1/a/1654:1658, 1/a/1791:1792, 1/a/1796:1801 | No text annotation | homologous J3_8P9A_058 J3_08594.1 | |
| J3_9F58_019 | 1/a/2432:2435, 1/a/2512:2517, 1/a/2590:2597 | No text annotation | homologous J3_8CRE_019 NA | |
| J3_9F58_020 | 1/a/2529:2532, 1/a/2547:2563, 1/a/2578:2581 | No text annotation | homologous J3_8CRE_020 NA | |
| J3_9F58_021 | 1/a/2651:2653, 1/a/2754:2765, 1/a/2793:2798 | No text annotation | homologous J3_8P9A_061 J3_04772.1 | |
| J3_9F58_022 | 1/a/2664:2666, 1/a/2690:2692, 1/a/2701:2706 | No text annotation | homologous J3_8P9A_062 J3_05327.1 | |
| J3_9F58_023 | 1/a/2886:2889, 1/a/2914:2916, 1/a/2930:2936 | No text annotation | homologous J3_8P9A_063 J3_44047.1 | |
| J3_9F58_024 | 1/a/3171:3176, 1/a/3212:3220, 1/a/3265:3279 | No text annotation | ||
| J3_9F58_025 | 1/a/3298:3300, 1/a/3314:3318, 1/a/3388:3390 | No text annotation | homologous J3_8P9A_065 J3_81015.1 | |
| J3_9F58_026 | 1/b/9:14, 1/b/66:67, 1/b/111:112 | No text annotation | homologous J3_8P9A_066 J3_26985.1 | |
| J4_9F58_001 | 1/a/112:113, 1/a/267:272, 1/a/293:299, 1/a/316:319 | No text annotation | homologous J4_8P9A_012 J4_94698.1 | |
| J4_9F58_002 | 1/a/185:189, 1/a/205:208, 1/a/212:214, 1/a/226:231 | No text annotation | homologous J4_8P9A_013 J4_43318.1 | |
| J4_9F58_003 | 1/a/1451:1457, 1/a/1475:1476, 1/a/1877:1880, 1/a/2352:2353 | No text annotation | homologous J4_8P9A_014 J4_34212.1 | |
| J4_9F58_004 | 1/a/1492:1496, 1/a/1520:1525, 1/a/1614:1615, 1/a/1829:1836 | No text annotation | homologous J4_8P9A_015 J4_47264.1 | |
| J4_9F58_005 | 1/a/1674:1675, 1/a/1693:1694, 1/a/1752:1753, 1/a/1772:1773 | No text annotation | homologous J4_8P9A_016 J4_75575.1 | |
| J4_9F58_006 | 1/a/2130:2134, 1/a/2146:2150, 1/a/2186:2190, 1/a/2317:2322 | No text annotation | homologous J4_8P9A_017 J4_78485.1 | |
| J4_9F58_007 | 1/a/2192:2194, 1/a/2248:2249, 1/a/2267:2276, 1/a/2310:2315 | No text annotation | homologous J4_8P9A_018 J4_42306.1 | |
| J4_9F58_008 | 1/a/2654:2658, 1/a/2712:2716, 1/a/2740:2742, 1/a/2751:2753 | No text annotation | homologous J4_8P9A_019 J4_59590.1 | |
| J4_9F58_009 | 1/a/3010:3012, 1/a/3042:3043, 1/a/3098:3100, 1/a/3134:3136 | No text annotation | homologous J4_8P9A_020 J4_37757.1 | |
| J5_9F58_001 | 1/4/35:42, 1/4/102:107, 1/4/115:116, 1/4/137:139, 1/a/20:22 | No text annotation | ||
| J5_9F58_002 | 1/a/658:663, 1/a/799:802, 1/a/941:944, 1/a/1375:1376, 1/a/1431:1437 | No text annotation | homologous J5_8P9A_011 J5_08384.1 | |
| J5_9F58_003 | 1/a/675:678, 1/a/702:706, 1/a/713:721, 1/a/749:751, 1/a/782:787 | No text annotation | homologous J5_8P9A_012 J5_56629.1 | |
| J5_9F58_004 | 1/a/1906:1914, 1/a/1938:1939, 1/a/2109:2110, 1/a/2114:2122, 1/a/2331:2333 | No text annotation | homologous J5_8P9A_013 J5_99177.1 | |
| J5_9F58_005 | 1/a/2399:2406, 1/a/2815:2823, 1/a/2867:2876, 1/a/2951:2957, 1/a/2975:2980 | No text annotation | ||
| J5_9F58_006 | 1/a/2416:2419, 1/a/2611:2614, 1/a/2627:2628, 1/a/2650:2651, 1/a/2798:2804 | No text annotation | homologous J5_8P9A_015 J5_96125.1 | |
| J6_9F58_001 | 1/4/32:35, 1/a/22:27, 1/a/58:68, 1/a/75:79, 1/a/106:110, 1/a/321:331 | No text annotation | ||
| J6_9F58_002 | 1/a/2416:2419, 1/a/2611:2614, 1/a/2627:2628, 1/a/2650:2653, 1/a/2754:2765, 1/a/2793:2804 | No text annotation | ||
| J7_9F58_001 | 1/a/949:954, 1/a/967:968, 1/a/1114:1117, 1/a/1141:1146, 1/a/1157:1161, 1/a/1338:1339, 1/a/1365:1370 | No text annotation |
Problematic loops
No problematic loops
Coloring options: