HL_9F58_053

3D structure

PDB id

9F58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Gcn2 dimer bound to the 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAAUUCAUUUUC

Length

12 nucleotides

Bulged bases

9F58|1|a|U|2537, 9F58|1|a|C|2539, 9F58|1|a|A|2540

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F58|1|a|G|2534
9F58|1|a|A|2535
9F58|1|a|A|2536
9F58|1|a|U|2537
9F58|1|a|U|2538
9F58|1|a|C|2539
9F58|1|a|A|2540
9F58|1|a|U|2541
9F58|1|a|U|2542
9F58|1|a|U|2543
9F58|1|a|U|2544
9F58|1|a|C|2545

Current chains

Chain a

25S rRNA

Nearby chains

Chain S

60S ribosomal protein L34-A

Chain h

60S ribosomal protein L8-A