HL_9F9S_179

3D structure

PDB id

9F9S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast SDD1 Disome with Mbf1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCUUGUG

Length

7 nucleotides

Bulged bases

9F9S|1|R1|U|718, 9F9S|1|R1|U|719, 9F9S|1|R1|U|721

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F9S|1|R1|C|716
9F9S|1|R1|C|717
9F9S|1|R1|U|718
9F9S|1|R1|U|719
9F9S|1|R1|G|720
9F9S|1|R1|U|721
9F9S|1|R1|G|722

Current chains

Chain R1

Saccharomyces cerevisiae S288C 18S ribosomal RNA (RDN18-1)

Nearby chains

Chain Lo

60S ribosomal protein L30

Chain Lr

60S ribosomal protein L27-A