9F9S Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_9F9S_001 | 1/CP/12:23 | No text annotation | homologous HL_4JYZ_001 NA | |
| HL_9F9S_002 | 1/CP/31:39 | tRNA anticodon loop | homologous HL_9DFC_104 NA | |
| HL_9F9S_003 | 1/CP/53:61 | T-loop with 2 stacked bulged bases | homologous HL_4V9Q_215 HL_33597.1 | |
| HL_9F9S_234 | 1/DP/31:39 | tRNA anticodon loop | homologous HL_6GSK_203 HL_81376.1 | |
| HL_9F9S_006 | 1/DP/53:61 | T-loop with 2 stacked bulged bases | homologous HL_3TUP_003 HL_33597.1 | |
| HL_9F9S_008 | 1/DQ/32:40 | tRNA anticodon loop | homologous HL_4V90_033 NA | |
| HL_9F9S_010 | 1/L1/38:45 | No text annotation | homologous HL_8P9A_113 HL_48677.1 | |
| HL_9F9S_011 | 1/L1/69:74 | No text annotation | homologous HL_8C3A_002 NA | |
| HL_9F9S_012 | 1/L1/90:96 | No text annotation | homologous HL_8C3A_003 NA | |
| HL_9F9S_013 | 1/L1/132:136 | No text annotation | homologous HL_8C3A_004 NA | |
| HL_9F9S_014 | 1/L1/194:201 | T-loop with 2 stacked bulged bases | homologous HL_8C3A_005 NA | |
| HL_9F9S_015 | 1/L1/208:212 | No text annotation | geometric HL_4V9F_011 HL_75660.6 | |
| HL_9F9S_016 | 1/L1/216:224 | T-loop with unstacked turn | homologous HL_8C3A_007 NA | |
| HL_9F9S_017 | 1/L1/278:287 | No text annotation | homologous HL_8C3A_008 NA | |
| HL_9F9S_018 | 1/L1/303:312 | Pseudoknot geometry | homologous HL_8C3A_009 NA | |
| HL_9F9S_019 | 1/L1/357:362 | GNRA | homologous HL_8C3A_010 NA | |
| HL_9F9S_020 | 1/L1/382:387 | GNRA | homologous HL_8C3A_011 NA | |
| HL_9F9S_022 | 1/L1/599:604 | GNRA | homologous HL_8P9A_125 HL_34789.1 | |
| HL_9F9S_023 | 1/L1/640:649 | T-loop with 2 stacked bulged bases | homologous HL_8C3A_014 NA | |
| HL_9F9S_024 | 1/L1/686:694 | No text annotation | homologous HL_8C3A_015 NA | |
| HL_9F9S_025 | 1/L1/707:712 | GNRA | homologous HL_8C3A_016 NA | |
| HL_9F9S_026 | 1/L1/732:737 | GNRA | homologous HL_8P9A_129 HL_34789.1 | |
| HL_9F9S_027 | 1/L1/763:768 | No text annotation | homologous HL_8C3A_018 NA | |
| HL_9F9S_028 | 1/L1/844:849 | UNCG variation | geometric HL_2CZJ_007 NA | |
| HL_9F9S_029 | 1/L1/876:885 | No text annotation | homologous HL_8C3A_020 NA | |
| HL_9F9S_030 | 1/L1/910:918 | No text annotation | homologous HL_8P9A_133 HL_79004.1 | |
| HL_9F9S_031 | 1/L1/958:963 | No text annotation | homologous HL_8P9A_134 HL_27530.1 | |
| HL_9F9S_033 | 1/L1/1076:1083 | T-loop related | homologous HL_8P9A_136 HL_63894.1 | |
| HL_9F9S_034 | 1/L1/1126:1132 | GNRA | homologous HL_8C3A_025 NA | |
| HL_9F9S_035 | 1/L1/1148:1155 | No text annotation | homologous HL_8C3A_026 NA | |
| HL_9F9S_038 | 1/L1/1347:1357 | No text annotation | homologous HL_8P9A_141 HL_29762.1 | |
| HL_9F9S_039 | 1/L1/1403:1408 | GNRA | homologous HL_8P9A_142 HL_34789.1 | |
| HL_9F9S_040 | 1/L1/1462:1470 | T-loop with 2 stacked bulged bases | homologous HL_8C3A_031 NA | |
| HL_9F9S_041 | 1/L1/1506:1512 | Pseudoknot geometry with 3' bulge | homologous HL_8C3A_032 NA | |
| HL_9F9S_042 | 1/L1/1544:1549 | GNRA variation | homologous HL_8C3A_033 NA | |
| HL_9F9S_044 | 1/L1/1599:1608 | No text annotation | homologous HL_8P9A_146 HL_77449.1 | |
| HL_9F9S_045 | 1/L1/1634:1639 | GNRA | homologous HL_8C3A_036 NA | |
| HL_9F9S_046 | 1/L1/1680:1688 | No text annotation | homologous HL_8C3A_037 NA | |
| HL_9F9S_047 | 1/L1/1719:1725 | No text annotation | homologous HL_8P9A_149 HL_97067.1 | |
| HL_9F9S_049 | 1/L1/1792:1796 | Mini UNCG | homologous HL_8P9A_151 HL_90436.1 | |
| HL_9F9S_050 | 1/L1/1844:1851 | No text annotation | homologous HL_8P9A_152 HL_28592.1 | |
| HL_9F9S_051 | 1/L1/1862:1868 | GNRA | homologous HL_8P9A_153 HL_34789.1 | |
| HL_9F9S_052 | 1/L1/1923:1928 | UNCG | homologous HL_8C3A_043 NA | |
| HL_9F9S_053 | 1/L1/2110:2114 | No text annotation | homologous HL_8C3A_045 NA | |
| HL_9F9S_054 | 1/L1/2135:2145 | No text annotation | homologous HL_8C3A_046 NA | |
| HL_9F9S_055 | 1/L1/2164:2170 | GNRA | homologous HL_8C3A_047 NA | |
| HL_9F9S_056 | 1/L1/2220:2225 | GNRA | homologous HL_8P9A_159 HL_34789.1 | |
| HL_9F9S_057 | 1/L1/2253:2263 | No text annotation | homologous HL_8C3A_049 NA | |
| HL_9F9S_058 | 1/L1/2292:2300 | No text annotation | homologous HL_8C3A_050 NA | |
| HL_9F9S_059 | 1/L1/2369:2378 | No text annotation | homologous HL_8P9A_162 HL_78372.1 | |
| HL_9F9S_060 | 1/L1/2568:2573 | No text annotation | ||
| HL_9F9S_061 | 1/L1/2616:2624 | No text annotation | homologous HL_8P9A_165 HL_11974.1 | |
| HL_9F9S_062 | 1/L1/2633:2645 | No text annotation | homologous HL_8P9A_166 HL_02042.1 | |
| HL_9F9S_063 | 1/L1/2673:2681 | No text annotation | homologous HL_8P9A_167 HL_02452.1 | |
| HL_9F9S_064 | 1/L1/2693:2700 | Pseudoknot geometry | homologous HL_8P9A_168 HL_52651.1 | |
| HL_9F9S_065 | 1/L1/2724:2732 | No text annotation | homologous HL_8C3A_059 NA | |
| HL_9F9S_066 | 1/L1/2744:2749 | GNRA | homologous HL_8P9A_170 HL_34789.1 | |
| HL_9F9S_067 | 1/L1/2776:2784 | Pseudoknot geometry | homologous HL_8C3A_061 NA | |
| HL_9F9S_068 | 1/L1/2840:2848 | No text annotation | homologous HL_8P9A_172 HL_52011.1 | |
| HL_9F9S_069 | 1/L1/2897:2904 | GNRA variation | homologous HL_8P9A_173 HL_46665.1 | |
| HL_9F9S_070 | 1/L1/2920:2926 | No text annotation | homologous HL_8P9A_174 HL_48677.1 | |
| HL_9F9S_071 | 1/L1/2963:2968 | GNRA | homologous HL_8C3A_065 NA | |
| HL_9F9S_072 | 1/L1/3025:3030 | GNRA | homologous HL_8C3A_066 NA | |
| HL_9F9S_073 | 1/L1/3068:3073 | Ribsomal LSU H95 | homologous HL_8C3A_067 NA | |
| HL_9F9S_074 | 1/L1/3110:3124 | No text annotation | homologous HL_8C3A_068 NA | |
| HL_9F9S_075 | 1/L1/3194:3197 | Externally structured | geometric HL_8C3A_022 NA | |
| HL_9F9S_076 | 1/L1/3240:3247 | No text annotation | homologous HL_8P9A_180 HL_31089.1 | |
| HL_9F9S_077 | 1/L1/3303:3311 | No text annotation | homologous HL_8C3A_071 NA | |
| HL_9F9S_079 | 1/L2/47:56 | No text annotation | homologous HL_8P9A_186 HL_17803.1 | |
| HL_9F9S_080 | 1/L2/69:89 | No text annotation | homologous HL_8P4V_073 NA | |
| HL_9F9S_081 | 1/L2/108:114 | No text annotation | homologous HL_8C3A_076 NA | |
| HL_9F9S_082 | 1/L2/124:129 | No text annotation | homologous HL_8C3A_077 NA | |
| HL_9F9S_083 | 1/L3/32:45 | No text annotation | geometric HL_8C3A_228 NA | |
| HL_9F9S_084 | 1/L3/36:41 | No text annotation | homologous HL_8C3A_073 NA | |
| HL_9F9S_085 | 1/L3/88:93 | GNRA | homologous HL_8P9A_185 HL_34789.1 | |
| HL_9F9S_086 | 1/M1/38:45 | No text annotation | homologous HL_8C3A_001 NA | |
| HL_9F9S_087 | 1/M1/69:74 | No text annotation | homologous HL_8C3A_002 NA | |
| HL_9F9S_088 | 1/M1/90:96 | No text annotation | homologous HL_8C3A_003 NA | |
| HL_9F9S_089 | 1/M1/132:136 | No text annotation | homologous HL_8C3A_004 NA | |
| HL_9F9S_090 | 1/M1/194:201 | T-loop with 2 stacked bulged bases | homologous HL_8C3A_005 NA | |
| HL_9F9S_091 | 1/M1/208:212 | No text annotation | geometric HL_5TBW_006 NA | |
| HL_9F9S_092 | 1/M1/216:224 | T-loop with unstacked turn | homologous HL_8C3A_007 NA | |
| HL_9F9S_093 | 1/M1/278:287 | No text annotation | homologous HL_8C3A_008 NA | |
| HL_9F9S_094 | 1/M1/303:312 | Pseudoknot geometry | homologous HL_8C3A_009 NA | |
| HL_9F9S_095 | 1/M1/357:362 | GNRA | homologous HL_8P9A_122 HL_34789.1 | |
| HL_9F9S_096 | 1/M1/382:387 | GNRA | homologous HL_8C3A_011 NA | |
| HL_9F9S_098 | 1/M1/599:604 | GNRA | homologous HL_8P9A_125 HL_34789.1 | |
| HL_9F9S_099 | 1/M1/640:649 | T-loop with 2 stacked bulged bases | homologous HL_8C3A_014 NA | |
| HL_9F9S_100 | 1/M1/686:694 | No text annotation | homologous HL_8C3A_015 NA | |
| HL_9F9S_101 | 1/M1/707:712 | GNRA | homologous HL_8C3A_016 NA | |
| HL_9F9S_102 | 1/M1/732:737 | GNRA | homologous HL_8P9A_129 HL_34789.1 | |
| HL_9F9S_103 | 1/M1/763:768 | No text annotation | homologous HL_8C3A_018 NA | |
| HL_9F9S_104 | 1/M1/844:849 | GNRA | homologous HL_8P9A_131 HL_34789.1 | |
| HL_9F9S_105 | 1/M1/876:885 | No text annotation | homologous HL_8C3A_020 NA | |
| HL_9F9S_106 | 1/M1/910:918 | No text annotation | homologous HL_8P9A_133 HL_79004.1 | |
| HL_9F9S_107 | 1/M1/958:963 | No text annotation | homologous HL_8P9A_134 HL_27530.1 | |
| HL_9F9S_109 | 1/M1/1076:1083 | T-loop related | homologous HL_8P9A_136 HL_63894.1 | |
| HL_9F9S_110 | 1/M1/1126:1132 | GNRA | homologous HL_8P9A_137 HL_34789.1 | |
| HL_9F9S_111 | 1/M1/1148:1155 | No text annotation | homologous HL_8C3A_026 NA | |
| HL_9F9S_114 | 1/M1/1347:1357 | No text annotation | homologous HL_8P9A_141 HL_29762.1 | |
| HL_9F9S_115 | 1/M1/1403:1408 | GNRA | homologous HL_8C3A_030 NA | |
| HL_9F9S_116 | 1/M1/1462:1470 | T-loop with 2 stacked bulged bases | homologous HL_8C3A_031 NA | |
| HL_9F9S_117 | 1/M1/1506:1512 | Pseudoknot geometry with 3' bulge | homologous HL_8C3A_032 NA | |
| HL_9F9S_118 | 1/M1/1544:1549 | GNRA variation | homologous HL_8C3A_033 NA | |
| HL_9F9S_120 | 1/M1/1599:1608 | No text annotation | homologous HL_8P9A_146 HL_77449.1 | |
| HL_9F9S_121 | 1/M1/1634:1639 | GNRA | homologous HL_8C3A_036 NA | |
| HL_9F9S_122 | 1/M1/1680:1688 | No text annotation | homologous HL_8C3A_037 NA | |
| HL_9F9S_123 | 1/M1/1719:1725 | No text annotation | homologous HL_8P9A_149 HL_97067.1 | |
| HL_9F9S_125 | 1/M1/1792:1796 | Mini UNCG | homologous HL_8P9A_151 HL_90436.1 | |
| HL_9F9S_126 | 1/M1/1844:1851 | No text annotation | homologous HL_8P9A_152 HL_28592.1 | |
| HL_9F9S_127 | 1/M1/1862:1868 | GNRA | homologous HL_8P9A_153 HL_34789.1 | |
| HL_9F9S_128 | 1/M1/1923:1928 | UNCG | homologous HL_8C3A_043 NA | |
| HL_9F9S_129 | 1/M1/2110:2114 | No text annotation | homologous HL_8P9A_156 HL_16651.1 | |
| HL_9F9S_130 | 1/M1/2135:2145 | No text annotation | homologous HL_8P9A_157 HL_87681.1 | |
| HL_9F9S_131 | 1/M1/2164:2170 | GNRA | homologous HL_8C3A_047 NA | |
| HL_9F9S_132 | 1/M1/2220:2225 | GNRA | homologous HL_8P9A_159 HL_34789.1 | |
| HL_9F9S_133 | 1/M1/2253:2263 | No text annotation | homologous HL_8C3A_049 NA | |
| HL_9F9S_134 | 1/M1/2292:2300 | No text annotation | homologous HL_8C3A_050 NA | |
| HL_9F9S_135 | 1/M1/2369:2378 | No text annotation | homologous HL_8C3A_051 NA | |
| HL_9F9S_138 | 1/M1/2568:2573 | No text annotation | homologous HL_8C3A_054 NA | |
| HL_9F9S_139 | 1/M1/2616:2624 | No text annotation | homologous HL_8P9A_165 HL_11974.1 | |
| HL_9F9S_140 | 1/M1/2633:2645 | No text annotation | homologous HL_8P9A_166 HL_02042.1 | |
| HL_9F9S_141 | 1/M1/2673:2681 | No text annotation | homologous HL_8P9A_167 HL_02452.1 | |
| HL_9F9S_142 | 1/M1/2693:2700 | Pseudoknot geometry | homologous HL_8P9A_168 HL_52651.1 | |
| HL_9F9S_143 | 1/M1/2724:2732 | No text annotation | homologous HL_8C3A_059 NA | |
| HL_9F9S_144 | 1/M1/2744:2749 | GNRA | homologous HL_8P9A_170 HL_34789.1 | |
| HL_9F9S_145 | 1/M1/2776:2784 | Pseudoknot geometry | homologous HL_8P9A_171 HL_52651.1 | |
| HL_9F9S_146 | 1/M1/2840:2848 | No text annotation | homologous HL_8C3A_062 NA | |
| HL_9F9S_147 | 1/M1/2897:2904 | GNRA variation | homologous HL_8P9A_173 HL_46665.1 | |
| HL_9F9S_148 | 1/M1/2920:2926 | No text annotation | homologous HL_8P9A_174 HL_48677.1 | |
| HL_9F9S_149 | 1/M1/2963:2968 | GNRA | homologous HL_8C3A_065 NA | |
| HL_9F9S_150 | 1/M1/3025:3030 | GNRA | homologous HL_8C3A_066 NA | |
| HL_9F9S_151 | 1/M1/3068:3073 | No text annotation | homologous HL_8P9A_177 HL_12125.1 | |
| HL_9F9S_152 | 1/M1/3110:3124 | No text annotation | homologous HL_8C3A_068 NA | |
| HL_9F9S_153 | 1/M1/3194:3197 | No text annotation | geometric HL_8C3A_004 NA | |
| HL_9F9S_154 | 1/M1/3240:3247 | No text annotation | homologous HL_8C3A_070 NA | |
| HL_9F9S_155 | 1/M1/3303:3311 | No text annotation | homologous HL_8C3A_071 NA | |
| HL_9F9S_157 | 1/M2/47:56 | No text annotation | homologous HL_8P9A_186 HL_17803.1 | |
| HL_9F9S_158 | 1/M2/69:89 | No text annotation | homologous HL_8P4V_073 NA | |
| HL_9F9S_159 | 1/M2/108:114 | No text annotation | homologous HL_8C3A_076 NA | |
| HL_9F9S_160 | 1/M2/124:129 | No text annotation | homologous HL_8P4V_075 NA | |
| HL_9F9S_161 | 1/M3/32:45 | No text annotation | geometric HL_8C3A_228 NA | |
| HL_9F9S_162 | 1/M3/36:41 | No text annotation | homologous HL_8C3A_073 NA | |
| HL_9F9S_163 | 1/M3/88:93 | GNRA | homologous HL_8C3A_074 NA | |
| HL_9F9S_164 | 1/R1/7:17 | No text annotation | homologous HL_8C3A_192 NA | |
| HL_9F9S_165 | 1/R1/70:81 | No text annotation | homologous HL_8C3A_193 NA | |
| HL_9F9S_166 | 1/R1/154:160 | GNRA related | homologous HL_8C3A_194 NA | |
| HL_9F9S_169 | 1/R1/243:250 | T-loop with 1 bulged base | homologous HL_8C3A_197 NA | |
| HL_9F9S_171 | 1/R1/330:338 | GNRA related | homologous HL_8C3A_199 NA | |
| HL_9F9S_172 | 1/R1/368:373 | GNRA variation | homologous HL_8C3A_200 NA | |
| HL_9F9S_173 | 1/R1/393:404 | No text annotation | homologous HL_8C3A_201 NA | |
| HL_9F9S_174 | 1/R1/414:419 | UNCG | homologous HL_8P9A_200 HL_61337.1 | |
| HL_9F9S_175 | 1/R1/450:456 | No text annotation | homologous HL_8P9A_201 HL_89167.1 | |
| HL_9F9S_177 | 1/R1/520:532 | No text annotation | homologous HL_8P9A_203 HL_68749.1 | |
| HL_9F9S_178 | 1/R1/569:574 | GNRA variation | homologous HL_8C3A_206 NA | |
| HL_9F9S_180 | 1/R1/764:772 | No text annotation | homologous HL_8C3A_208 NA | |
| HL_9F9S_181 | 1/R1/777:783 | No text annotation | geometric HL_2Y8W_001 NA | |
| HL_9F9S_183 | 1/R1/900:909 | No text annotation | homologous HL_8P9A_209 HL_38491.1 | |
| HL_9F9S_184 | 1/R1/937:942 | GNRA | homologous HL_8C3A_212 NA | |
| HL_9F9S_185 | 1/R1/997:1007 | No text annotation | homologous HL_8C3A_213 NA | |
| HL_9F9S_186 | 1/R1/1055:1064 | No text annotation | homologous HL_8P9A_212 HL_91620.1 | |
| HL_9F9S_187 | 1/R1/1084:1089 | GNRA | homologous HL_8C3A_215 NA | |
| HL_9F9S_188 | 1/R1/1121:1126 | Externally structured | geometric HL_8C3A_022 NA | |
| HL_9F9S_189 | 1/R1/1188:1197 | No text annotation | homologous HL_8C3A_217 NA | |
| HL_9F9S_190 | 1/R1/1238:1247 | GNRA wlth extra near cWW | homologous HL_8P9A_216 HL_45359.1 | |
| HL_9F9S_191 | 1/R1/1296:1301 | GNRA | homologous HL_8P9A_217 HL_34789.1 | |
| HL_9F9S_192 | 1/R1/1309:1316 | T-loop related | homologous HL_8P9A_218 HL_63894.1 | |
| HL_9F9S_194 | 1/R1/1396:1402 | No text annotation | homologous HL_8C3A_222 NA | |
| HL_9F9S_195 | 1/R1/1501:1506 | GNRA | homologous HL_8C3A_223 NA | |
| HL_9F9S_196 | 1/R1/1550:1561 | No text annotation | homologous HL_8C3A_224 NA | |
| HL_9F9S_197 | 1/R1/1594:1602 | No text annotation | homologous HL_8C3A_225 NA | |
| HL_9F9S_198 | 1/R1/1778:1783 | GNRA variation | homologous HL_8C3A_227 NA | |
| HL_9F9S_199 | 1/S1/7:17 | No text annotation | homologous HL_8C3A_192 NA | |
| HL_9F9S_200 | 1/S1/70:81 | No text annotation | geometric HL_8C3A_006 NA | |
| HL_9F9S_201 | 1/S1/154:160 | GNRA related | homologous HL_8C3A_194 NA | |
| HL_9F9S_204 | 1/S1/243:250 | T-loop with 1 bulged base | homologous HL_8C3A_197 NA | |
| HL_9F9S_206 | 1/S1/330:338 | GNRA related | homologous HL_8C3A_199 NA | |
| HL_9F9S_207 | 1/S1/368:373 | No text annotation | homologous HL_8P9A_198 HL_93535.2 | |
| HL_9F9S_208 | 1/S1/393:404 | No text annotation | homologous HL_8C3A_201 NA | |
| HL_9F9S_209 | 1/S1/414:419 | UNCG | homologous HL_8P9A_200 HL_61337.1 | |
| HL_9F9S_210 | 1/S1/450:456 | No text annotation | homologous HL_8P9A_201 HL_89167.1 | |
| HL_9F9S_212 | 1/S1/520:532 | No text annotation | homologous HL_8C3A_205 NA | |
| HL_9F9S_213 | 1/S1/569:574 | GNRA variation | homologous HL_8C3A_206 NA | |
| HL_9F9S_214 | 1/S1/764:772 | No text annotation | homologous HL_8C3A_208 NA | |
| HL_9F9S_215 | 1/S1/777:783 | No text annotation | homologous HL_8P9A_207 HL_89167.1 | |
| HL_9F9S_217 | 1/S1/900:909 | No text annotation | homologous HL_8C3A_211 NA | |
| HL_9F9S_218 | 1/S1/937:942 | GNRA | homologous HL_8C3A_212 NA | |
| HL_9F9S_219 | 1/S1/997:1007 | No text annotation | homologous HL_8C3A_213 NA | |
| HL_9F9S_220 | 1/S1/1055:1064 | No text annotation | ||
| HL_9F9S_221 | 1/S1/1084:1089 | GNRA | homologous HL_8P9A_213 HL_34789.1 | |
| HL_9F9S_222 | 1/S1/1121:1126 | GNRA | homologous HL_8C3A_216 NA | |
| HL_9F9S_223 | 1/S1/1188:1197 | No text annotation | homologous HL_8P9A_215 HL_97521.1 | |
| HL_9F9S_224 | 1/S1/1238:1247 | GNRA wlth extra near cWW | homologous HL_8P9A_216 HL_45359.1 | |
| HL_9F9S_225 | 1/S1/1296:1301 | GNRA | homologous HL_8P9A_217 HL_34789.1 | |
| HL_9F9S_226 | 1/S1/1309:1316 | T-loop related | homologous HL_8C3A_220 NA | |
| HL_9F9S_228 | 1/S1/1396:1402 | No text annotation | homologous HL_8P9A_220 HL_76371.1 | |
| HL_9F9S_229 | 1/S1/1501:1506 | GNRA | homologous HL_8C3A_223 NA | |
| HL_9F9S_230 | 1/S1/1550:1561 | No text annotation | homologous HL_8C3A_224 NA | |
| HL_9F9S_231 | 1/S1/1594:1602 | No text annotation | homologous HL_8P9A_223 NA | |
| HL_9F9S_233 | 1/S1/1778:1783 | GNRA variation | homologous HL_8C3A_227 NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_9F9S_004 | tRNA D-loop | ||
| HL_9F9S_005 | No text annotation | ||
| HL_9F9S_007 | No text annotation | ||
| HL_9F9S_009 | No text annotation | ||
| HL_9F9S_021 | No text annotation | ||
| HL_9F9S_032 | GNRA | ||
| HL_9F9S_036 | No text annotation | ||
| HL_9F9S_037 | GNRA wlth tandem sheared | ||
| HL_9F9S_043 | No text annotation | ||
| HL_9F9S_048 | No text annotation | ||
| HL_9F9S_078 | Mini UNCG | ||
| HL_9F9S_097 | No text annotation | ||
| HL_9F9S_235 | No text annotation | ||
| HL_9F9S_108 | GNRA | ||
| HL_9F9S_112 | No text annotation | ||
| HL_9F9S_113 | GNRA wlth tandem sheared | ||
| HL_9F9S_119 | No text annotation | ||
| HL_9F9S_124 | No text annotation | ||
| HL_9F9S_136 | No text annotation | ||
| HL_9F9S_137 | No text annotation | ||
| HL_9F9S_156 | Mini UNCG | ||
| HL_9F9S_167 | Externally structured | ||
| HL_9F9S_168 | No text annotation | ||
| HL_9F9S_170 | Mini UNCG | ||
| HL_9F9S_176 | Mini UNCG | ||
| HL_9F9S_179 | No text annotation | ||
| HL_9F9S_182 | Pseudoknot geometry | ||
| HL_9F9S_193 | No text annotation | ||
| HL_9F9S_202 | No text annotation | ||
| HL_9F9S_203 | No text annotation | ||
| HL_9F9S_205 | Mini UNCG | ||
| HL_9F9S_211 | Externally structured | ||
| HL_9F9S_216 | No text annotation | ||
| HL_9F9S_236 | No text annotation | ||
| HL_9F9S_227 | No text annotation | ||
| HL_9F9S_232 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_9F9S_001 | 1/L1/7:8, 1/L2/150:152 | Single bulged C | homologous IL_8C3A_002 NA | |
| IL_9F9S_002 | 1/L1/13:15, 1/L2/144:145 | Single bulged U | homologous IL_8P9A_232 IL_97561.1 | |
| IL_9F9S_003 | 1/L1/27:28, 1/L1/56:58 | No text annotation | homologous IL_8C3A_004 NA | |
| IL_9F9S_004 | 1/L1/31:38, 1/L1/45:53 | tSH-tHW-tHH-tHS | homologous IL_8P9A_234 IL_93502.1 | |
| IL_9F9S_005 | 1/L1/82:89, 1/L1/97:103 | 8x7 Sarcin-Ricin; G-bulge | homologous IL_8P9A_235 IL_53348.1 | |
| IL_9F9S_006 | 1/L1/123:124, 1/L1/144:149 | No text annotation | homologous IL_8P9A_236 IL_10396.1 | |
| IL_9F9S_007 | 1/L1/125:127, 1/L1/141:143 | Isolated non-canonical cWW pair | homologous IL_8C3A_008 NA | |
| IL_9F9S_008 | 1/L1/163:165, 1/L1/257:258 | Single stack bend | homologous IL_8P9A_238 IL_15011.1 | |
| IL_9F9S_009 | 1/L1/169:170, 1/L1/248:253 | No text annotation | geometric IL_5TBW_010 NA | |
| IL_9F9S_010 | 1/L1/177:178, 1/L1/238:241 | No text annotation | geometric IL_5TBW_501 NA | |
| IL_9F9S_011 | 1/L1/189:191, 1/L1/204:205 | Single bulged U | homologous IL_8C3A_013 NA | |
| IL_9F9S_012 | 1/L1/337:339, 1/L2/25:26 | Single bulged A | homologous IL_8P9A_242 IL_14190.1 | |
| IL_9F9S_013 | 1/L1/376:379, 1/L1/390:403 | No text annotation | geometric IL_5TBW_014 NA | |
| IL_9F9S_014 | 1/L1/404:410, 1/L2/13:19 | No text annotation | homologous IL_8P9A_244 IL_22311.1 | |
| IL_9F9S_015 | 1/L1/429:431, 1/L1/628:630 | Isolated non-canonical cWW pair | homologous IL_8P9A_245 IL_71625.1 | |
| IL_9F9S_016 | 1/L1/512:513, 1/L1/577:579 | Single bulged A | homologous IL_8P9A_246 IL_14190.1 | |
| IL_9F9S_017 | 1/L1/517:525, 1/L1/567:573 | No text annotation | homologous IL_8P9A_247 IL_52712.1 | |
| IL_9F9S_018 | 1/L1/531:538, 1/L1/553:561 | No text annotation | homologous IL_8P9A_248 IL_25001.1 | |
| IL_9F9S_019 | 1/L1/668:670, 1/L1/792:794 | Isolated non-canonical cWW pair | homologous IL_8C3A_023 NA | |
| IL_9F9S_020 | 1/L1/680:684, 1/L1/696:700 | No text annotation | homologous IL_8P9A_250 IL_87030.1 | |
| IL_9F9S_021 | 1/L1/725:728, 1/L1/741:745 | UAA/GAN variation | homologous IL_8P9A_251 IL_45790.1 | |
| IL_9F9S_022 | 1/L1/752:753, 1/L1/779:781 | Single bulged A | homologous IL_8P9A_252 IL_14190.1 | |
| IL_9F9S_023 | 1/L1/755:756, 1/L1/775:777 | Single bulged U | homologous IL_8C3A_027 NA | |
| IL_9F9S_024 | 1/L1/758:763, 1/L1/768:773 | No text annotation | homologous IL_8C3A_028 NA | |
| IL_9F9S_025 | 1/L1/803:805, 1/L1/938:940 | Isolated non-canonical cWW pair | homologous IL_8C3A_029 NA | |
| IL_9F9S_026 | 1/L1/805:809, 1/L1/931:938 | No text annotation | homologous IL_8P9A_256 IL_73855.1 | |
| IL_9F9S_027 | 1/L1/833:834, 1/L1/859:861 | Single bulged G | homologous IL_8C3A_032 NA | |
| IL_9F9S_028 | 1/L1/834:838, 1/L1/855:859 | Triple sheared | homologous IL_8C3A_033 NA | |
| IL_9F9S_029 | 1/L1/869:872, 1/L1/888:890 | No text annotation | homologous IL_8P9A_259 IL_36931.1 | |
| IL_9F9S_030 | 1/L1/873:875, 1/L1/886:887 | Single bulged U | homologous IL_8C3A_035 NA | |
| IL_9F9S_031 | 1/L1/907:909, 1/L1/919:923 | No text annotation | homologous IL_8C3A_036 NA | |
| IL_9F9S_032 | 1/L1/954:956, 1/L1/965:967 | Isolated non-canonical cWW pair | homologous IL_8P9A_262 IL_71625.1 | |
| IL_9F9S_033 | 1/L1/969:970, 1/L1/1111:1113 | No text annotation | homologous IL_8C3A_038 NA | |
| IL_9F9S_034 | 1/L1/977:982, 1/L1/1101:1104 | No text annotation | ||
| IL_9F9S_035 | 1/L1/983:985, 1/L1/1099:1100 | Single bulged G | homologous IL_8P9A_265 IL_28408.1 | |
| IL_9F9S_036 | 1/L1/991:997, 1/L1/1052:1058 | 7x7 Sarcin-Ricin with intercalated A; G-bulge | homologous IL_8P9A_266 IL_94128.1 | |
| IL_9F9S_037 | 1/L1/997:998, 1/L1/1050:1052 | Minor groove platform | homologous IL_8C3A_042 NA | |
| IL_9F9S_038 | 1/L1/999:1004, 1/L1/1046:1049 | C-loop with bulged stacked A's | homologous IL_8C3A_043 NA | |
| IL_9F9S_039 | 1/L1/1006:1009, 1/L1/1041:1044 | Tandem non-canonical cWW pairs | homologous IL_8P9A_269 IL_71194.1 | |
| IL_9F9S_040 | 1/L1/1009:1011, 1/L1/1039:1041 | Isolated non-canonical cWW pair | homologous IL_8P9A_270 IL_01003.1 | |
| IL_9F9S_042 | 1/L1/1069:1071, 1/L1/1087:1089 | Isolated non-canonical cWW pair | homologous IL_8C3A_047 NA | |
| IL_9F9S_043 | 1/L1/1074:1076, 1/L1/1083:1084 | Single bulged G | homologous IL_8C3A_048 NA | |
| IL_9F9S_044 | 1/L1/1120:1122, 1/L1/1136:1138 | Isolated non-canonical cWW pair | homologous IL_8C3A_049 NA | |
| IL_9F9S_046 | 1/L1/1167:1171, 1/L1/1328:1332 | UAA/GAN | homologous IL_8C3A_051 NA | |
| IL_9F9S_047 | 1/L1/1173:1180, 1/L1/1325:1326 | SSU/LSU pseudoknot | homologous IL_8P9A_277 IL_07396.1 | |
| IL_9F9S_048 | 1/L1/1180:1182, 1/L1/1324:1325 | Single bulged U | homologous IL_8P9A_278 IL_97561.1 | |
| IL_9F9S_049 | 1/L1/1187:1194, 1/L1/1314:1319 | No text annotation | homologous IL_8C3A_054 NA | |
| IL_9F9S_050 | 1/L1/1194:1205, 1/L1/1299:1314 | No text annotation | homologous IL_8C3A_055 NA | |
| IL_9F9S_051 | 1/L1/1207:1209, 1/L1/1296:1297 | Single bulged U | homologous IL_8C3A_056 NA | |
| IL_9F9S_472 | 1/L1/1218:1226, 1/L1/1283:1287 | Kink-turn | homologous IL_8CRE_057 NA | |
| IL_9F9S_054 | 1/L1/1376:1378, 1/L1/1428:1431 | No text annotation | homologous IL_8P9A_285 IL_42997.4 | |
| IL_9F9S_055 | 1/L1/1385:1387, 1/L1/1420:1421 | Single bulged A | homologous IL_8C3A_062 NA | |
| IL_9F9S_056 | 1/L1/1388:1395, 1/L1/1415:1419 | Kink-turn | homologous IL_8C3A_063 NA | |
| IL_9F9S_057 | 1/L1/1398:1400, 1/L1/1411:1412 | Single bulged A | homologous IL_8P9A_288 IL_14190.1 | |
| IL_9F9S_058 | 1/L1/1444:1450, 1/L1/2354:2359 | 7x6 Sarcin-Ricin; G-bulge | homologous IL_8P9A_289 IL_02666.1 | |
| IL_9F9S_059 | 1/L1/1501:1505, 1/L1/1513:1515 | C-loop | homologous IL_8C3A_482 NA | |
| IL_9F9S_060 | 1/L1/1532:1536, 1/L1/1585:1590 | UAA/GAN | homologous IL_8C3A_067 NA | |
| IL_9F9S_061 | 1/L1/1561:1563, 1/L1/1577:1578 | Single stack bend | geometric IL_7KGA_003 NA | |
| IL_9F9S_063 | 1/L1/1618:1621, 1/L1/1824:1826 | No text annotation | homologous IL_8C3A_070 NA | |
| IL_9F9S_475 | 1/L1/1623:1624, 1/L1/1819:1822 | Major groove platform related | homologous IL_8P9A_293 IL_48076.7 | |
| IL_9F9S_065 | 1/L1/1627:1631, 1/L1/1811:1816 | No text annotation | homologous IL_8C3A_072 NA | |
| IL_9F9S_066 | 1/L1/1645:1649, 1/L1/1806:1810 | Triple sheared | homologous IL_8C3A_073 NA | |
| IL_9F9S_067 | 1/L1/1661:1663, 1/L1/1786:1788 | Isolated non-canonical cWW pair | homologous IL_8C3A_074 NA | |
| IL_9F9S_068 | 1/L1/1669:1670, 1/L1/1778:1780 | Single bulged C | homologous IL_8P9A_297 IL_05642.1 | |
| IL_9F9S_069 | 1/L1/1670:1671, 1/L1/1776:1778 | Single stack bend | homologous IL_8C3A_076 NA | |
| IL_9F9S_070 | 1/L1/1694:1698, 1/L1/1747:1752 | No text annotation | homologous IL_8C3A_077 NA | |
| IL_9F9S_071 | 1/L1/1702:1707, 1/L1/1737:1743 | No text annotation | homologous IL_8P9A_300 IL_00680.1 | |
| IL_9F9S_072 | 1/L1/1711:1717, 1/L1/1727:1733 | No text annotation | homologous IL_8P9A_301 IL_93476.1 | |
| IL_9F9S_073 | 1/L1/1883:1889, 1/L1/2346:2349 | No text annotation | homologous IL_8C3A_080 NA | |
| IL_9F9S_074 | 1/L1/1895:1897, 1/L1/2338:2340 | No text annotation | homologous IL_8P9A_303 IL_10432.1 | |
| IL_9F9S_075 | 1/L1/1898:1901, 1/L1/2336:2337 | Major groove platform; stack outside cWW | geometric IL_8C3A_082 NA | |
| IL_9F9S_076 | 1/L1/1898:1906, 1/L1/2333:2337 | No text annotation | geometric IL_8C3A_484 NA | |
| IL_9F9S_077 | 1/L1/1901:1906, 1/L1/2333:2336 | No text annotation | homologous IL_8C3A_083 NA | |
| IL_9F9S_078 | 1/L1/1918:1923, 1/L1/1928:1934 | No text annotation | homologous IL_8C3A_084 NA | |
| IL_9F9S_079 | 1/L1/1940:1942, 1/L1/2106:2108 | Isolated non-canonical cWW pair | homologous IL_8C3A_085 NA | |
| IL_9F9S_080 | 1/L1/1947:1948, 1/L1/2098:2101 | No text annotation | homologous IL_8P9A_309 IL_18824.1 | |
| IL_9F9S_081 | 1/L1/2128:2129, 1/L1/2323:2325 | Single bulged A | homologous IL_8C3A_087 NA | |
| IL_9F9S_082 | 1/L1/2156:2161, 1/L1/2173:2180 | No text annotation | homologous IL_8C3A_088 NA | |
| IL_9F9S_083 | 1/L1/2196:2199, 1/L1/2245:2246 | No text annotation | homologous IL_8C3A_089 NA | |
| IL_9F9S_084 | 1/L1/2200:2201, 1/L1/2241:2244 | Multiple bulged bases | homologous IL_8C3A_090 NA | |
| IL_9F9S_085 | 1/L1/2204:2210, 1/L1/2235:2238 | No text annotation | ||
| IL_9F9S_086 | 1/L1/2211:2217, 1/L1/2228:2234 | No text annotation | homologous IL_8C3A_093 NA | |
| IL_9F9S_087 | 1/L1/2276:2277, 1/L1/2307:2310 | No text annotation | geometric IL_8C3A_094 NA | |
| IL_9F9S_088 | 1/L1/2277:2288, 1/L1/2304:2307 | No text annotation | homologous IL_8C3A_095 NA | |
| IL_9F9S_089 | 1/L1/2391:2394, 1/L1/2986:2988 | No text annotation | homologous IL_8P9A_319 IL_75527.1 | |
| IL_9F9S_090 | 1/L1/2396:2398, 1/L1/2981:2984 | No text annotation | homologous IL_8P9A_320 IL_80025.1 | |
| IL_9F9S_091 | 1/L1/2409:2411, 1/L1/2811:2812 | Single bulged U | homologous IL_8C3A_098 NA | |
| IL_9F9S_092 | 1/L1/2412:2413, 1/L1/2807:2810 | Minor groove platform | homologous IL_8C3A_099 NA | |
| IL_9F9S_093 | 1/L1/2423:2425, 1/L1/2604:2607 | No text annotation | homologous IL_8C3A_100 NA | |
| IL_9F9S_094 | 1/L1/2520:2526, 1/L1/2584:2587 | No text annotation | homologous IL_8C3A_106 NA | |
| IL_9F9S_095 | 1/L1/2614:2615, 1/L1/2625:2627 | Single bulged A | homologous IL_8P9A_325 IL_14190.1 | |
| IL_9F9S_096 | 1/L1/2666:2668, 1/L1/2686:2690 | No text annotation | homologous IL_8P9A_326 IL_14250.1 | |
| IL_9F9S_097 | 1/L1/2718:2721, 1/L1/2735:2738 | Tandem non-canonical cWW pairs | homologous IL_8P9A_327 IL_15225.1 | |
| IL_9F9S_098 | 1/L1/2770:2773, 1/L1/2787:2788 | Single stack bend | homologous IL_8C3A_110 NA | |
| IL_9F9S_099 | 1/L1/2823:2826, 1/L1/2863:2867 | No text annotation | homologous IL_8C3A_111 NA | |
| IL_9F9S_100 | 1/L1/2826:2828, 1/L1/2862:2863 | Major groove platform | homologous IL_8C3A_112 NA | |
| IL_9F9S_101 | 1/L1/2828:2830, 1/L1/2858:2862 | Major groove minor groove platform with extra cWW | homologous IL_8C3A_113 NA | |
| IL_9F9S_102 | 1/L1/2835:2839, 1/L1/2849:2853 | No text annotation | homologous IL_8C3A_114 NA | |
| IL_9F9S_103 | 1/L1/2876:2877, 1/L1/2949:2951 | No text annotation | homologous IL_8P9A_334 IL_46637.1 | |
| IL_9F9S_104 | 1/L1/2879:2881, 1/L1/2943:2947 | No text annotation | homologous IL_8C3A_116 NA | |
| IL_9F9S_105 | 1/L1/2881:2882, 1/L1/2940:2943 | No text annotation | homologous IL_8C3A_117 NA | |
| IL_9F9S_106 | 1/L1/2889:2891, 1/L1/2912:2914 | Isolated non-canonical cWW pair | geometric IL_5TBW_110 NA | |
| IL_9F9S_107 | 1/L1/2889:2892, 1/L1/2909:2914 | No text annotation | geometric IL_5TBW_475 NA | |
| IL_9F9S_108 | 1/L1/2891:2892, 1/L1/2909:2912 | Major groove platform with intercalation | homologous IL_8C3A_119 NA | |
| IL_9F9S_109 | 1/L1/2918:2920, 1/L1/2926:2928 | Isolated non-canonical cWW pair | homologous IL_8P9A_340 IL_01003.1 | |
| IL_9F9S_110 | 1/L1/2960:2961, 1/L1/2970:2972 | Single bulged A | geometric IL_2VPL_002 IL_14190.1 | |
| IL_9F9S_111 | 1/L1/3004:3007, 1/L1/3139:3144 | Double sheared | homologous IL_8P9A_342 IL_58355.1 | |
| IL_9F9S_112 | 1/L1/3012:3014, 1/L1/3040:3042 | Isolated non-canonical cWW pair | homologous IL_8C3A_124 NA | |
| IL_9F9S_113 | 1/L1/3018:3025, 1/L1/3030:3036 | 8x7 Sarcin-Ricin; G-bulge | homologous IL_8P9A_344 IL_62167.1 | |
| IL_9F9S_114 | 1/L1/3047:3051, 1/L1/3091:3094 | No text annotation | homologous IL_8P9A_345 IL_06671.1 | |
| IL_9F9S_115 | 1/L1/3054:3059, 1/L1/3084:3088 | No text annotation | homologous IL_8P9A_346 IL_98200.1 | |
| IL_9F9S_116 | 1/L1/3063:3064, 1/L1/3077:3080 | No text annotation | homologous IL_8C3A_128 NA | |
| IL_9F9S_117 | 1/L1/3103:3107, 1/L1/3127:3131 | UAA/GAN | homologous IL_8C3A_129 NA | |
| IL_9F9S_118 | 1/L1/3164:3166, 1/L1/3284:3286 | Isolated non-canonical cWW pair | homologous IL_8C3A_130 NA | |
| IL_9F9S_119 | 1/L1/3168:3170, 1/L1/3280:3282 | Isolated non-canonical cWW pair | homologous IL_8P9A_350 IL_01003.1 | |
| IL_9F9S_120 | 1/L1/3177:3179, 1/L1/3210:3211 | Single bulged A | homologous IL_8P9A_351 IL_14190.1 | |
| IL_9F9S_121 | 1/L1/3179:3188, 1/L1/3204:3210 | No text annotation | homologous IL_8P9A_352 IL_28855.1 | |
| IL_9F9S_122 | 1/L1/3193:3194, 1/L1/3197:3199 | Single bulged U | geometric IL_5TBW_125 NA | |
| IL_9F9S_123 | 1/L1/3225:3229, 1/L1/3258:3260 | No text annotation | homologous IL_8C3A_133 NA | |
| IL_9F9S_124 | 1/L1/3233:3235, 1/L1/3252:3254 | Isolated non-canonical cWW pair | homologous IL_8P9A_354 IL_01003.1 | |
| IL_9F9S_125 | 1/L1/3235:3238, 1/L1/3249:3252 | Tandem non-canonical cWW pairs | homologous IL_8C3A_134 NA | |
| IL_9F9S_126 | 1/L1/3300:3303, 1/L1/3311:3314 | Tandem non-canonical cWW pairs | homologous IL_8P9A_356 IL_71194.1 | |
| IL_9F9S_127 | 1/L1/3318:3320, 1/L1/3387:3388 | Single bulged U | homologous IL_8C3A_136 NA | |
| IL_9F9S_128 | 1/L1/3324:3325, 1/L1/3381:3383 | Single bulged U | homologous IL_8P9A_358 IL_97561.1 | |
| IL_9F9S_129 | 1/L1/3328:3330, 1/L1/3373:3378 | No text annotation | homologous IL_8C3A_138 NA | |
| IL_9F9S_130 | 1/L1/3332:3337, 1/L1/3367:3371 | No text annotation | homologous IL_8P9A_360 IL_48489.1 | |
| IL_9F9S_131 | 1/L1/3340:3342, 1/L1/3363:3364 | Single bulged U | homologous IL_8C3A_140 NA | |
| IL_9F9S_132 | 1/L1/3342:3345, 1/L1/3360:3363 | Double sheared; A in syn | homologous IL_8C3A_141 NA | |
| IL_9F9S_133 | 1/L1/3349:3350, 1/L1/3353:3356 | Multiple bulged bases | homologous IL_8C3A_142 NA | |
| IL_9F9S_134 | 1/L2/64:66, 1/L2/93:96 | Isolated non-canonical cWW with bulges | homologous IL_8P9A_371 IL_68118.1 | |
| IL_9F9S_135 | 1/L2/68:69, 1/L2/89:91 | Single bulged U | homologous IL_8P9A_372 IL_97561.1 | |
| IL_9F9S_136 | 1/L3/15:16, 1/L3/63:65 | Single bulged A | homologous IL_8C3A_143 NA | |
| IL_9F9S_137 | 1/L3/21:27, 1/L3/53:58 | Minor groove platform related | homologous IL_8C3A_144 NA | |
| IL_9F9S_138 | 1/L3/28:29, 1/L3/49:52 | No text annotation | homologous IL_8C3A_145 NA | |
| IL_9F9S_139 | 1/L3/29:30, 1/L3/47:49 | Single stack bend | homologous IL_8C3A_146 NA | |
| IL_9F9S_140 | 1/L3/32:36, 1/L3/41:45 | No text annotation | homologous IL_8C3A_147 NA | |
| IL_9F9S_141 | 1/L3/72:80, 1/L3/100:106 | 8x7 Sarcin-Ricin; G-bulge | homologous IL_8P9A_369 IL_62167.1 | |
| IL_9F9S_142 | 1/L3/84:87, 1/L3/94:96 | Isolated non-canonical cWW pair | homologous IL_8C3A_149 NA | |
| IL_9F9S_144 | 1/M1/7:8, 1/M2/150:152 | Single bulged C | homologous IL_8C3A_002 NA | |
| IL_9F9S_145 | 1/M1/13:15, 1/M2/144:145 | Single bulged U | homologous IL_8P9A_232 IL_97561.1 | |
| IL_9F9S_146 | 1/M1/27:28, 1/M1/56:58 | No text annotation | homologous IL_8C3A_004 NA | |
| IL_9F9S_147 | 1/M1/31:38, 1/M1/45:53 | tSH-tHW-tHH-tHS | homologous IL_8P9A_234 IL_93502.1 | |
| IL_9F9S_148 | 1/M1/82:89, 1/M1/97:103 | 8x7 Sarcin-Ricin; G-bulge | homologous IL_8P9A_235 IL_53348.1 | |
| IL_9F9S_149 | 1/M1/123:124, 1/M1/144:149 | No text annotation | homologous IL_8C3A_007 NA | |
| IL_9F9S_150 | 1/M1/125:127, 1/M1/141:143 | Isolated non-canonical cWW pair | homologous IL_8C3A_008 NA | |
| IL_9F9S_151 | 1/M1/163:165, 1/M1/257:258 | Single stack bend | homologous IL_8P9A_238 IL_15011.1 | |
| IL_9F9S_152 | 1/M1/169:172, 1/M1/247:253 | No text annotation | ||
| IL_9F9S_154 | 1/M1/177:178, 1/M1/238:241 | No text annotation | geometric IL_5TBW_501 NA | |
| IL_9F9S_155 | 1/M1/189:191, 1/M1/204:205 | Single bulged U | homologous IL_8C3A_013 NA | |
| IL_9F9S_156 | 1/M1/337:339, 1/M2/25:26 | Single bulged A | homologous IL_8P9A_242 IL_14190.1 | |
| IL_9F9S_157 | 1/M1/376:379, 1/M1/390:403 | No text annotation | geometric IL_5TBW_014 NA | |
| IL_9F9S_158 | 1/M1/404:410, 1/M2/13:19 | No text annotation | homologous IL_8P9A_244 IL_22311.1 | |
| IL_9F9S_159 | 1/M1/429:431, 1/M1/628:630 | Isolated non-canonical cWW pair | homologous IL_8P9A_245 IL_71625.1 | |
| IL_9F9S_160 | 1/M1/512:513, 1/M1/577:579 | Single bulged A | homologous IL_8P9A_246 IL_14190.1 | |
| IL_9F9S_161 | 1/M1/517:525, 1/M1/567:573 | No text annotation | homologous IL_8P9A_247 IL_52712.1 | |
| IL_9F9S_162 | 1/M1/531:538, 1/M1/553:561 | No text annotation | homologous IL_8P9A_248 IL_25001.1 | |
| IL_9F9S_163 | 1/M1/668:670, 1/M1/792:794 | Isolated non-canonical cWW pair | homologous IL_8C3A_023 NA | |
| IL_9F9S_164 | 1/M1/680:684, 1/M1/696:700 | No text annotation | homologous IL_8P9A_250 IL_87030.1 | |
| IL_9F9S_165 | 1/M1/725:728, 1/M1/741:745 | No text annotation | homologous IL_8C3A_025 NA | |
| IL_9F9S_166 | 1/M1/752:753, 1/M1/779:781 | Single bulged A | homologous IL_8P9A_252 IL_14190.1 | |
| IL_9F9S_167 | 1/M1/755:756, 1/M1/775:777 | Single bulged U | homologous IL_8C3A_027 NA | |
| IL_9F9S_168 | 1/M1/758:763, 1/M1/768:773 | No text annotation | homologous IL_8C3A_028 NA | |
| IL_9F9S_169 | 1/M1/803:805, 1/M1/938:940 | Isolated non-canonical cWW pair | homologous IL_8C3A_029 NA | |
| IL_9F9S_170 | 1/M1/805:809, 1/M1/931:938 | No text annotation | homologous IL_8C3A_030 NA | |
| IL_9F9S_171 | 1/M1/828:829, 1/M1/895:897 | Single bulged A | homologous IL_8C3A_031 NA | |
| IL_9F9S_172 | 1/M1/833:834, 1/M1/859:861 | Single bulged G | homologous IL_8C3A_032 NA | |
| IL_9F9S_173 | 1/M1/834:838, 1/M1/855:859 | Triple sheared | homologous IL_8C3A_033 NA | |
| IL_9F9S_174 | 1/M1/869:872, 1/M1/888:890 | Major groove platform with extra cWW | homologous IL_8C3A_034 NA | |
| IL_9F9S_175 | 1/M1/873:875, 1/M1/886:887 | Single bulged U | homologous IL_8P9A_260 IL_97561.1 | |
| IL_9F9S_176 | 1/M1/907:909, 1/M1/919:923 | No text annotation | homologous IL_8C3A_036 NA | |
| IL_9F9S_177 | 1/M1/954:956, 1/M1/965:967 | Isolated non-canonical cWW pair | homologous IL_8P9A_262 IL_71625.1 | |
| IL_9F9S_178 | 1/M1/969:970, 1/M1/1111:1113 | No text annotation | homologous IL_8C3A_038 NA | |
| IL_9F9S_179 | 1/M1/977:982, 1/M1/1101:1104 | No text annotation | ||
| IL_9F9S_180 | 1/M1/983:985, 1/M1/1099:1100 | Single bulged G | homologous IL_8C3A_040 NA | |
| IL_9F9S_181 | 1/M1/991:997, 1/M1/1052:1058 | 7x7 Sarcin-Ricin with intercalated A; G-bulge | homologous IL_8P9A_266 IL_94128.1 | |
| IL_9F9S_182 | 1/M1/997:998, 1/M1/1050:1052 | Minor groove platform | homologous IL_8C3A_042 NA | |
| IL_9F9S_183 | 1/M1/999:1004, 1/M1/1046:1049 | C-loop with bulged stacked A's | homologous IL_8C3A_043 NA | |
| IL_9F9S_184 | 1/M1/1006:1009, 1/M1/1041:1044 | No text annotation | homologous IL_8C3A_481 NA | |
| IL_9F9S_185 | 1/M1/1009:1011, 1/M1/1039:1041 | Isolated non-canonical cWW pair | homologous IL_8P9A_270 IL_01003.1 | |
| IL_9F9S_187 | 1/M1/1069:1071, 1/M1/1087:1089 | Isolated non-canonical cWW pair | homologous IL_8P9A_272 IL_01003.1 | |
| IL_9F9S_188 | 1/M1/1074:1076, 1/M1/1083:1084 | Single bulged G | homologous IL_8C3A_048 NA | |
| IL_9F9S_189 | 1/M1/1120:1122, 1/M1/1136:1138 | Isolated non-canonical cWW pair | homologous IL_8C3A_049 NA | |
| IL_9F9S_191 | 1/M1/1167:1171, 1/M1/1328:1332 | UAA/GAN | homologous IL_8C3A_051 NA | |
| IL_9F9S_192 | 1/M1/1173:1180, 1/M1/1325:1326 | SSU/LSU pseudoknot | homologous IL_8P9A_277 IL_07396.1 | |
| IL_9F9S_193 | 1/M1/1180:1182, 1/M1/1324:1325 | Single bulged U | homologous IL_8P9A_278 IL_97561.1 | |
| IL_9F9S_194 | 1/M1/1187:1194, 1/M1/1314:1319 | No text annotation | homologous IL_8C3A_054 NA | |
| IL_9F9S_195 | 1/M1/1194:1205, 1/M1/1299:1314 | No text annotation | homologous IL_8C3A_055 NA | |
| IL_9F9S_196 | 1/M1/1207:1209, 1/M1/1296:1297 | Single bulged U | homologous IL_8C3A_056 NA | |
| IL_9F9S_197 | 1/M1/1218:1226, 1/M1/1283:1287 | Kink-turn | homologous IL_8C3A_057 NA | |
| IL_9F9S_200 | 1/M1/1376:1378, 1/M1/1428:1431 | No text annotation | homologous IL_8P9A_285 IL_42997.4 | |
| IL_9F9S_201 | 1/M1/1385:1387, 1/M1/1420:1421 | Single bulged A | homologous IL_8P9A_286 IL_14190.1 | |
| IL_9F9S_202 | 1/M1/1388:1395, 1/M1/1415:1419 | Kink-turn | homologous IL_8P9A_287 IL_90775.1 | |
| IL_9F9S_203 | 1/M1/1398:1400, 1/M1/1411:1412 | Single bulged A | homologous IL_8P9A_288 IL_14190.1 | |
| IL_9F9S_204 | 1/M1/1444:1450, 1/M1/2354:2359 | No text annotation | homologous IL_8C3A_065 NA | |
| IL_9F9S_205 | 1/M1/1501:1505, 1/M1/1513:1515 | C-loop | homologous IL_8P9A_290 IL_63596.12 | |
| IL_9F9S_206 | 1/M1/1532:1536, 1/M1/1585:1590 | UAA/GAN | homologous IL_8C3A_067 NA | |
| IL_9F9S_207 | 1/M1/1561:1563, 1/M1/1577:1579 | No text annotation | homologous IL_8C3A_069 NA | |
| IL_9F9S_208 | 1/M1/1618:1621, 1/M1/1824:1826 | No text annotation | homologous IL_8C3A_070 NA | |
| IL_9F9S_209 | 1/M1/1623:1624, 1/M1/1819:1822 | No text annotation | homologous IL_8C3A_483 NA | |
| IL_9F9S_210 | 1/M1/1627:1631, 1/M1/1811:1816 | No text annotation | homologous IL_8P9A_294 IL_37467.1 | |
| IL_9F9S_211 | 1/M1/1645:1649, 1/M1/1806:1810 | Triple sheared | homologous IL_8C3A_073 NA | |
| IL_9F9S_212 | 1/M1/1661:1663, 1/M1/1786:1788 | Isolated non-canonical cWW pair | homologous IL_8C3A_074 NA | |
| IL_9F9S_213 | 1/M1/1669:1670, 1/M1/1778:1780 | Single bulged C | homologous IL_8C3A_075 NA | |
| IL_9F9S_214 | 1/M1/1670:1671, 1/M1/1776:1778 | Single stack bend | homologous IL_8P9A_298 IL_15011.1 | |
| IL_9F9S_215 | 1/M1/1694:1698, 1/M1/1747:1752 | No text annotation | homologous IL_8C3A_077 NA | |
| IL_9F9S_216 | 1/M1/1702:1707, 1/M1/1737:1743 | No text annotation | homologous IL_8P9A_300 IL_00680.1 | |
| IL_9F9S_217 | 1/M1/1711:1717, 1/M1/1727:1733 | No text annotation | homologous IL_8P9A_301 IL_93476.1 | |
| IL_9F9S_218 | 1/M1/1883:1889, 1/M1/2346:2349 | No text annotation | homologous IL_8C3A_080 NA | |
| IL_9F9S_219 | 1/M1/1895:1897, 1/M1/2338:2340 | No text annotation | homologous IL_8P9A_303 IL_10432.1 | |
| IL_9F9S_220 | 1/M1/1898:1901, 1/M1/2336:2337 | Major groove platform; stack outside cWW | geometric IL_8C3A_082 NA | |
| IL_9F9S_221 | 1/M1/1898:1906, 1/M1/2333:2337 | No text annotation | geometric IL_8C3A_484 NA | |
| IL_9F9S_222 | 1/M1/1901:1906, 1/M1/2333:2336 | No text annotation | homologous IL_8C3A_083 NA | |
| IL_9F9S_223 | 1/M1/1918:1923, 1/M1/1928:1934 | No text annotation | homologous IL_8C3A_084 NA | |
| IL_9F9S_224 | 1/M1/1940:1942, 1/M1/2106:2108 | Isolated non-canonical cWW pair | homologous IL_8C3A_085 NA | |
| IL_9F9S_225 | 1/M1/1947:1948, 1/M1/2098:2101 | No text annotation | homologous IL_8P9A_309 IL_18824.1 | |
| IL_9F9S_226 | 1/M1/2128:2129, 1/M1/2323:2325 | Single bulged A | homologous IL_8P9A_310 IL_14190.1 | |
| IL_9F9S_227 | 1/M1/2156:2161, 1/M1/2173:2180 | No text annotation | homologous IL_8P9A_311 IL_14684.1 | |
| IL_9F9S_228 | 1/M1/2196:2199, 1/M1/2245:2246 | Minor groove platform, major groove intercalation | homologous IL_8P9A_312 IL_73108.1 | |
| IL_9F9S_229 | 1/M1/2200:2201, 1/M1/2241:2244 | Major groove intercalation | homologous IL_8P9A_313 IL_71421.1 | |
| IL_9F9S_230 | 1/M1/2204:2210, 1/M1/2235:2238 | No text annotation | ||
| IL_9F9S_231 | 1/M1/2211:2217, 1/M1/2228:2234 | No text annotation | homologous IL_8C3A_093 NA | |
| IL_9F9S_232 | 1/M1/2276:2277, 1/M1/2307:2310 | No text annotation | geometric IL_8C3A_094 NA | |
| IL_9F9S_233 | 1/M1/2277:2288, 1/M1/2304:2307 | No text annotation | homologous IL_8C3A_095 NA | |
| IL_9F9S_234 | 1/M1/2391:2394, 1/M1/2986:2988 | No text annotation | homologous IL_8P9A_319 IL_75527.1 | |
| IL_9F9S_235 | 1/M1/2396:2398, 1/M1/2981:2984 | No text annotation | homologous IL_8C3A_097 NA | |
| IL_9F9S_236 | 1/M1/2409:2411, 1/M1/2811:2812 | Single bulged U | homologous IL_8C3A_098 NA | |
| IL_9F9S_237 | 1/M1/2412:2413, 1/M1/2807:2810 | Minor groove platform | homologous IL_8C3A_099 NA | |
| IL_9F9S_238 | 1/M1/2423:2425, 1/M1/2604:2607 | No text annotation | homologous IL_8C3A_100 NA | |
| IL_9F9S_242 | 1/M1/2520:2526, 1/M1/2584:2587 | No text annotation | homologous IL_8C3A_106 NA | |
| IL_9F9S_243 | 1/M1/2614:2615, 1/M1/2625:2627 | Single bulged A | homologous IL_8P9A_325 IL_14190.1 | |
| IL_9F9S_244 | 1/M1/2666:2668, 1/M1/2686:2690 | No text annotation | homologous IL_8P9A_326 IL_14250.1 | |
| IL_9F9S_245 | 1/M1/2714:2716, 1/M1/2740:2741 | Single bulged A | geometric IL_8C3A_014 NA | |
| IL_9F9S_246 | 1/M1/2718:2721, 1/M1/2735:2738 | Tandem non-canonical cWW pairs | homologous IL_8P9A_327 IL_15225.1 | |
| IL_9F9S_247 | 1/M1/2770:2773, 1/M1/2787:2788 | Single stack bend | homologous IL_8C3A_110 NA | |
| IL_9F9S_248 | 1/M1/2823:2826, 1/M1/2863:2867 | No text annotation | homologous IL_8C3A_111 NA | |
| IL_9F9S_249 | 1/M1/2826:2828, 1/M1/2862:2863 | No text annotation | homologous IL_8P9A_331 IL_46637.1 | |
| IL_9F9S_250 | 1/M1/2828:2830, 1/M1/2858:2862 | Major groove minor groove platform with extra cWW | homologous IL_8C3A_113 NA | |
| IL_9F9S_251 | 1/M1/2835:2839, 1/M1/2849:2853 | No text annotation | homologous IL_8C3A_114 NA | |
| IL_9F9S_252 | 1/M1/2876:2877, 1/M1/2949:2951 | Major groove platform | homologous IL_8C3A_115 NA | |
| IL_9F9S_253 | 1/M1/2879:2881, 1/M1/2943:2947 | No text annotation | homologous IL_8C3A_116 NA | |
| IL_9F9S_254 | 1/M1/2881:2882, 1/M1/2940:2943 | No text annotation | homologous IL_8C3A_117 NA | |
| IL_9F9S_255 | 1/M1/2889:2891, 1/M1/2912:2914 | Isolated non-canonical cWW pair | geometric IL_5TBW_110 NA | |
| IL_9F9S_256 | 1/M1/2889:2892, 1/M1/2909:2914 | No text annotation | geometric IL_5TBW_475 NA | |
| IL_9F9S_257 | 1/M1/2891:2892, 1/M1/2909:2912 | Major groove platform with intercalation | homologous IL_8C3A_119 NA | |
| IL_9F9S_258 | 1/M1/2918:2920, 1/M1/2926:2928 | Isolated non-canonical cWW pair | homologous IL_8P9A_340 IL_01003.1 | |
| IL_9F9S_259 | 1/M1/2960:2961, 1/M1/2970:2972 | Single bulged A | geometric IL_5TBW_060 NA | |
| IL_9F9S_260 | 1/M1/3004:3007, 1/M1/3139:3144 | Double sheared | homologous IL_8P9A_342 IL_58355.1 | |
| IL_9F9S_261 | 1/M1/3012:3014, 1/M1/3040:3042 | Isolated non-canonical cWW pair | homologous IL_8C3A_124 NA | |
| IL_9F9S_262 | 1/M1/3018:3025, 1/M1/3030:3036 | 8x7 Sarcin-Ricin; G-bulge | homologous IL_8P9A_344 IL_62167.1 | |
| IL_9F9S_263 | 1/M1/3047:3051, 1/M1/3091:3094 | No text annotation | homologous IL_8P9A_345 IL_06671.1 | |
| IL_9F9S_264 | 1/M1/3054:3059, 1/M1/3084:3088 | No text annotation | homologous IL_8P9A_346 IL_98200.1 | |
| IL_9F9S_265 | 1/M1/3063:3064, 1/M1/3077:3080 | No text annotation | homologous IL_8C3A_128 NA | |
| IL_9F9S_266 | 1/M1/3103:3107, 1/M1/3127:3131 | UAA/GAN | homologous IL_8C3A_129 NA | |
| IL_9F9S_267 | 1/M1/3164:3166, 1/M1/3284:3286 | Isolated non-canonical cWW pair | homologous IL_8C3A_130 NA | |
| IL_9F9S_268 | 1/M1/3168:3170, 1/M1/3280:3282 | Isolated non-canonical cWW pair | homologous IL_8P9A_350 IL_01003.1 | |
| IL_9F9S_269 | 1/M1/3177:3179, 1/M1/3210:3211 | Single bulged A | homologous IL_8P9A_351 IL_14190.1 | |
| IL_9F9S_270 | 1/M1/3179:3188, 1/M1/3204:3210 | No text annotation | homologous IL_8P9A_352 IL_28855.1 | |
| IL_9F9S_271 | 1/M1/3193:3194, 1/M1/3197:3199 | Single bulged U | geometric IL_5TBW_125 NA | |
| IL_9F9S_272 | 1/M1/3225:3229, 1/M1/3258:3260 | No text annotation | homologous IL_8C3A_133 NA | |
| IL_9F9S_273 | 1/M1/3233:3235, 1/M1/3252:3254 | Isolated non-canonical cWW pair | homologous IL_8P9A_354 IL_01003.1 | |
| IL_9F9S_274 | 1/M1/3235:3238, 1/M1/3249:3252 | Tandem non-canonical cWW pairs | homologous IL_8C3A_134 NA | |
| IL_9F9S_275 | 1/M1/3300:3303, 1/M1/3311:3314 | Tandem non-canonical cWW pairs | homologous IL_8P9A_356 IL_71194.1 | |
| IL_9F9S_276 | 1/M1/3318:3320, 1/M1/3387:3388 | Single bulged U | homologous IL_8C3A_136 NA | |
| IL_9F9S_277 | 1/M1/3324:3325, 1/M1/3381:3383 | Single bulged U | homologous IL_8P9A_358 IL_97561.1 | |
| IL_9F9S_278 | 1/M1/3328:3330, 1/M1/3373:3378 | No text annotation | homologous IL_8C3A_138 NA | |
| IL_9F9S_279 | 1/M1/3332:3337, 1/M1/3367:3371 | No text annotation | homologous IL_8P9A_360 IL_48489.1 | |
| IL_9F9S_280 | 1/M1/3340:3342, 1/M1/3363:3364 | Single bulged U | homologous IL_8C3A_140 NA | |
| IL_9F9S_281 | 1/M1/3342:3345, 1/M1/3360:3363 | Double sheared; A in syn | homologous IL_8P9A_362 IL_58355.1 | |
| IL_9F9S_282 | 1/M2/64:66, 1/M2/93:96 | Isolated non-canonical cWW with bulges | homologous IL_8P9A_371 IL_68118.1 | |
| IL_9F9S_283 | 1/M2/68:69, 1/M2/89:91 | Single bulged U | homologous IL_8P9A_372 IL_97561.1 | |
| IL_9F9S_284 | 1/M3/15:16, 1/M3/63:65 | Single bulged A | homologous IL_8C3A_143 NA | |
| IL_9F9S_285 | 1/M3/21:27, 1/M3/53:58 | Minor groove platform related | homologous IL_8C3A_144 NA | |
| IL_9F9S_286 | 1/M3/28:29, 1/M3/49:52 | No text annotation | homologous IL_8C3A_145 NA | |
| IL_9F9S_287 | 1/M3/29:30, 1/M3/47:49 | Single stack bend | homologous IL_8C3A_146 NA | |
| IL_9F9S_288 | 1/M3/32:36, 1/M3/41:45 | No text annotation | homologous IL_8C3A_147 NA | |
| IL_9F9S_289 | 1/M3/72:80, 1/M3/100:106 | 8x7 Sarcin-Ricin; G-bulge | homologous IL_8P9A_369 IL_62167.1 | |
| IL_9F9S_290 | 1/M3/84:87, 1/M3/94:96 | Isolated non-canonical cWW pair | homologous IL_8C3A_149 NA | |
| IL_9F9S_291 | 1/R1/24:26, 1/R1/600:601 | Single bulged C | homologous IL_8P9A_373 IL_05642.1 | |
| IL_9F9S_292 | 1/R1/35:37, 1/R1/471:473 | Isolated non-canonical cWW pair | geometric IL_4V88_385 NA | |
| IL_9F9S_293 | 1/R1/37:41, 1/R1/466:471 | Triple sheared related | homologous IL_8C3A_394 NA | |
| IL_9F9S_294 | 1/R1/42:48, 1/R1/431:433 | No text annotation | geometric IL_8C3A_395 NA | |
| IL_9F9S_295 | 1/R1/50:52, 1/R1/428:429 | Minor groove platform | homologous IL_8C3A_396 NA | |
| IL_9F9S_296 | 1/R1/58:63, 1/R1/87:89 | No text annotation | homologous IL_8P9A_378 IL_61299.5 | |
| IL_9F9S_297 | 1/R1/64:69, 1/R1/82:86 | No text annotation | homologous IL_8C3A_398 NA | |
| IL_9F9S_298 | 1/R1/109:112, 1/R1/302:305 | Tandem non-canonical cWW pairs | homologous IL_8P9A_380 IL_71194.1 | |
| IL_9F9S_299 | 1/R1/113:116, 1/R1/300:301 | Multiple bulged bases | homologous IL_8P9A_381 IL_71421.1 | |
| IL_9F9S_300 | 1/R1/117:122, 1/R1/295:299 | No text annotation | homologous IL_8C3A_401 NA | |
| IL_9F9S_301 | 1/R1/143:149, 1/R1/165:172 | No text annotation | homologous IL_8C3A_402 NA | |
| IL_9F9S_302 | 1/R1/150:152, 1/R1/162:164 | No text annotation | homologous IL_8P9A_384 IL_23751.1 | |
| IL_9F9S_304 | 1/R1/204:206, 1/R1/259:263 | Major groove platform with extra cWW | homologous IL_8C3A_405 NA | |
| IL_9F9S_305 | 1/R1/206:208, 1/R1/257:259 | Isolated non-canonical cWW pair | homologous IL_8C3A_406 NA | |
| IL_9F9S_306 | 1/R1/265:267, 1/R1/288:289 | Single bulged A | homologous IL_8P9A_388 IL_14190.1 | |
| IL_9F9S_307 | 1/R1/270:273, 1/R1/283:285 | No text annotation | homologous IL_8P9A_389 IL_15698.4 | |
| IL_9F9S_309 | 1/R1/311:316, 1/R1/348:355 | Kink-turn with non-sequential stacking | homologous IL_8C3A_410 NA | |
| IL_9F9S_310 | 1/R1/318:323, 1/R1/345:346 | No text annotation | homologous IL_8P9A_392 IL_01372.1 | |
| IL_9F9S_311 | 1/R1/363:365, 1/R1/376:381 | No text annotation | homologous IL_8C3A_412 NA | |
| IL_9F9S_312 | 1/R1/411:413, 1/R1/420:422 | Isolated non-canonical cWW pair | homologous IL_8C3A_414 NA | |
| IL_9F9S_313 | 1/R1/439:441, 1/R1/463:464 | Single bulged U | homologous IL_8P9A_396 IL_97561.1 | |
| IL_9F9S_314 | 1/R1/443:447, 1/R1/460:461 | C-loop | homologous IL_8C3A_416 NA | |
| IL_9F9S_315 | 1/R1/447:448, 1/R1/458:460 | Single bulged G | homologous IL_8P9A_398 IL_28408.1 | |
| IL_9F9S_316 | 1/R1/480:484, 1/R1/503:508 | No text annotation | ||
| IL_9F9S_317 | 1/R1/514:516, 1/R1/536:543 | Isolated tHS basepair with bulges | geometric IL_5TBW_095 NA | |
| IL_9F9S_318 | 1/R1/517:518, 1/R1/533:535 | Minor groove platform | homologous IL_8C3A_501 NA | |
| IL_9F9S_319 | 1/R1/518:520, 1/R1/532:533 | Minor groove platform | homologous IL_8P9A_401 IL_34520.1 | |
| IL_9F9S_320 | 1/R1/550:557, 1/R1/587:588 | SSU/LSU pseudoknot | homologous IL_8P9A_402 IL_11411.1 | |
| IL_9F9S_321 | 1/R1/557:559, 1/R1/586:587 | Single bulged U | homologous IL_8C3A_424 NA | |
| IL_9F9S_322 | 1/R1/562:568, 1/R1/575:583 | No text annotation | homologous IL_8P9A_404 IL_52042.1 | |
| IL_9F9S_323 | 1/R1/616:622, 1/R1/1104:1105 | No text annotation | homologous IL_8C3A_426 NA | |
| IL_9F9S_324 | 1/R1/624:626, 1/R1/973:975 | Isolated non-canonical cWW pair | homologous IL_8C3A_427 NA | |
| IL_9F9S_325 | 1/R1/627:631, 1/R1/968:972 | tSH-tHW-tHS | homologous IL_8C3A_428 NA | |
| IL_9F9S_329 | 1/R1/746:747, 1/R1/802:805 | Major groove minor groove platform; mini C-loop | homologous IL_8C3A_430 NA | |
| IL_9F9S_330 | 1/R1/748:750, 1/R1/799:801 | Isolated non-canonical cWW pair | homologous IL_8C3A_431 NA | |
| IL_9F9S_476 | 1/R1/751:759, 1/R1/791:798 | No text annotation | homologous IL_8P9A_414 IL_59049.2 | |
| IL_9F9S_332 | 1/R1/817:822, 1/R1/850:854 | No text annotation | ||
| IL_9F9S_333 | 1/R1/865:866, 1/R1/962:965 | Major groove platform; stack outside cWW | geometric IL_6N5P_003 IL_74641.1 | |
| IL_9F9S_334 | 1/R1/868:870, 1/R1/957:960 | Isolated cWH basepair | homologous IL_8C3A_510 NA | |
| IL_9F9S_335 | 1/R1/871:874, 1/R1/953:956 | Tandem non-canonical cWW pairs | homologous IL_8P9A_419 IL_15225.1 | |
| IL_9F9S_336 | 1/R1/874:878, 1/R1/950:953 | Tandem non-canonical cWW pairs | homologous IL_8P9A_420 IL_15225.1 | |
| IL_9F9S_337 | 1/R1/884:888, 1/R1/924:928 | No text annotation | ||
| IL_9F9S_338 | 1/R1/893:899, 1/R1/910:919 | Kink-turn related | homologous IL_8C3A_440 NA | |
| IL_9F9S_339 | 1/R1/982:990, 1/R1/1014:1019 | No text annotation | ||
| IL_9F9S_340 | 1/R1/990:994, 1/R1/1010:1014 | No text annotation | ||
| IL_9F9S_341 | 1/R1/1034:1036, 1/R1/1095:1101 | No text annotation | homologous IL_8P9A_425 IL_82706.2 | |
| IL_9F9S_342 | 1/R1/1041:1044, 1/R1/1074:1077 | Tandem non-canonical cWW pairs | homologous IL_8C3A_444 NA | |
| IL_9F9S_343 | 1/R1/1051:1053, 1/R1/1066:1067 | Single bulged U | homologous IL_8P9A_427 IL_97561.1 | |
| IL_9F9S_344 | 1/R1/1111:1118, 1/R1/1129:1134 | 8x6 Sarcin-Ricin with inserted Y; G-bulge | homologous IL_8C3A_446 NA | |
| IL_9F9S_345 | 1/R1/1146:1147, 1/R1/1630:1632 | Single bulged A | homologous IL_8C3A_447 NA | |
| IL_9F9S_346 | 1/R1/1149:1151, 1/R1/1627:1628 | Single bulged G | homologous IL_8C3A_448 NA | |
| IL_9F9S_347 | 1/R1/1157:1160, 1/R1/1617:1621 | C-loop | homologous IL_8C3A_449 NA | |
| IL_9F9S_348 | 1/R1/1173:1175, 1/R1/1464:1466 | Isolated non-canonical cWW pair | homologous IL_8C3A_450 NA | |
| IL_9F9S_349 | 1/R1/1178:1179, 1/R1/1459:1461 | Minor groove platform | homologous IL_8C3A_451 NA | |
| IL_9F9S_350 | 1/R1/1213:1215, 1/R1/1448:1450 | Isolated non-canonical cWW pair | homologous IL_8C3A_452 NA | |
| IL_9F9S_351 | 1/R1/1224:1233, 1/R1/1252:1259 | No text annotation | homologous IL_8P9A_470 IL_28304.1 | |
| IL_9F9S_477 | 1/R1/1234:1236, 1/R1/1249:1251 | No text annotation | homologous IL_8P9A_436 IL_38565.1 | |
| IL_9F9S_353 | 1/R1/1268:1270, 1/R1/1440:1441 | Single bulged U | homologous IL_8C3A_455 NA | |
| IL_9F9S_354 | 1/R1/1272:1276, 1/R1/1436:1438 | No text annotation | geometric IL_8C3A_456 NA | |
| IL_9F9S_355 | 1/R1/1272:1278, 1/R1/1430:1438 | No text annotation | geometric IL_4V88_510 NA | |
| IL_9F9S_356 | 1/R1/1276:1278, 1/R1/1430:1436 | No text annotation | homologous IL_8P9A_440 IL_93811.1 | |
| IL_9F9S_357 | 1/R1/1280:1281, 1/R1/1426:1428 | Single bulged A | homologous IL_8C3A_458 NA | |
| IL_9F9S_358 | 1/R1/1290:1292, 1/R1/1323:1325 | Isolated cWH basepair | homologous IL_8P9A_442 IL_10892.1 | |
| IL_9F9S_359 | 1/R1/1306:1308, 1/R1/1317:1318 | Minor groove platform | homologous IL_8P9A_443 IL_34520.1 | |
| IL_9F9S_360 | 1/R1/1339:1342, 1/R1/1383:1385 | Isolated non-canonical cWW pair | homologous IL_8P9A_444 IL_01003.1 | |
| IL_9F9S_361 | 1/R1/1345:1348, 1/R1/1377:1380 | No text annotation | homologous IL_8P9A_445 IL_78800.2 | |
| IL_9F9S_362 | 1/R1/1352:1354, 1/R1/1369:1373 | No text annotation | homologous IL_8C3A_464 NA | |
| IL_9F9S_363 | 1/R1/1389:1391, 1/R1/1407:1412 | Major groove platform; stack outside cWW | geometric IL_4V88_458 NA | |
| IL_9F9S_364 | 1/R1/1480:1487, 1/R1/1519:1527 | No text annotation | homologous IL_8C3A_466 NA | |
| IL_9F9S_365 | 1/R1/1488:1494, 1/R1/1513:1518 | No text annotation | homologous IL_8P9A_449 IL_22564.1 | |
| IL_9F9S_366 | 1/R1/1495:1498, 1/R1/1509:1512 | Tandem non-canonical cWW pairs | homologous IL_8P9A_450 IL_71194.1 | |
| IL_9F9S_367 | 1/R1/1540:1545, 1/R1/1566:1571 | No text annotation | homologous IL_8C3A_507 NA | |
| IL_9F9S_368 | 1/R1/1636:1638, 1/R1/1764:1767 | No text annotation | homologous IL_8P9A_452 IL_18228.1 | |
| IL_9F9S_369 | 1/R1/1638:1641, 1/R1/1760:1764 | No text annotation | homologous IL_8C3A_471 NA | |
| IL_9F9S_370 | 1/R1/1642:1644, 1/R1/1757:1759 | Isolated non-canonical cWW pair | homologous IL_8C3A_472 NA | |
| IL_9F9S_371 | 1/R1/1644:1647, 1/R1/1753:1757 | No text annotation | homologous IL_8CRE_469 IL_28833.1 | |
| IL_9F9S_372 | 1/R1/1650:1652, 1/R1/1748:1750 | Isolated non-canonical cWW pair | homologous IL_8P9A_456 IL_01003.1 | |
| IL_9F9S_373 | 1/R1/1653:1656, 1/R1/1744:1747 | Double sheared | homologous IL_8P9A_457 IL_58355.1 | |
| IL_9F9S_374 | 1/R1/1656:1658, 1/R1/1743:1744 | Single bulged U | homologous IL_8P9A_458 IL_97561.1 | |
| IL_9F9S_375 | 1/R1/1664:1672, 1/R1/1729:1737 | No text annotation | ||
| IL_9F9S_376 | 1/R1/1672:1674, 1/R1/1727:1729 | Isolated non-canonical cWW pair | homologous IL_8P9A_461 IL_01003.1 | |
| IL_9F9S_377 | 1/R1/1675:1678, 1/R1/1723:1726 | Tandem non-canonical cWW pairs | homologous IL_8P9A_462 IL_71194.1 | |
| IL_9F9S_378 | 1/R1/1678:1682, 1/R1/1719:1723 | Triple sheared | homologous IL_8C3A_480 NA | |
| IL_9F9S_379 | 1/S1/24:26, 1/S1/600:601 | Single bulged C | homologous IL_8P9A_373 IL_05642.1 | |
| IL_9F9S_380 | 1/S1/35:37, 1/S1/471:473 | Isolated non-canonical cWW pair | geometric IL_8C3A_393 NA | |
| IL_9F9S_381 | 1/S1/37:41, 1/S1/466:471 | Triple sheared related | homologous IL_8C3A_394 NA | |
| IL_9F9S_382 | 1/S1/42:48, 1/S1/431:433 | No text annotation | geometric IL_4V88_387 NA | |
| IL_9F9S_383 | 1/S1/50:52, 1/S1/428:429 | Minor groove platform | homologous IL_8P9A_377 IL_34520.1 | |
| IL_9F9S_384 | 1/S1/58:63, 1/S1/87:89 | No text annotation | homologous IL_8P9A_378 IL_61299.5 | |
| IL_9F9S_385 | 1/S1/64:69, 1/S1/82:86 | No text annotation | homologous IL_8C3A_398 NA | |
| IL_9F9S_386 | 1/S1/109:112, 1/S1/302:305 | Tandem non-canonical cWW pairs | homologous IL_8P9A_380 IL_71194.1 | |
| IL_9F9S_387 | 1/S1/113:116, 1/S1/300:301 | Multiple bulged bases | homologous IL_8P9A_381 IL_71421.1 | |
| IL_9F9S_388 | 1/S1/117:122, 1/S1/295:299 | No text annotation | homologous IL_8C3A_401 NA | |
| IL_9F9S_389 | 1/S1/144:149, 1/S1/165:171 | tWH-tWH-tHW-tHW | geometric IL_4LFB_009 IL_00680.1 | |
| IL_9F9S_390 | 1/S1/150:152, 1/S1/162:164 | No text annotation | homologous IL_8P9A_384 IL_23751.1 | |
| IL_9F9S_391 | 1/S1/186:189, 1/S1/196:199 | Double sheared | homologous IL_8P9A_385 IL_58355.1 | |
| IL_9F9S_392 | 1/S1/204:206, 1/S1/259:263 | No text annotation | homologous IL_8P9A_386 IL_36931.1 | |
| IL_9F9S_393 | 1/S1/206:208, 1/S1/257:259 | Isolated non-canonical cWW pair | homologous IL_8C3A_406 NA | |
| IL_9F9S_394 | 1/S1/265:267, 1/S1/288:289 | Single bulged A | homologous IL_8P9A_388 IL_14190.1 | |
| IL_9F9S_395 | 1/S1/270:273, 1/S1/283:285 | No text annotation | homologous IL_8C3A_408 NA | |
| IL_9F9S_397 | 1/S1/311:316, 1/S1/348:355 | Kink-turn with non-sequential stacking | homologous IL_8C3A_410 NA | |
| IL_9F9S_398 | 1/S1/318:323, 1/S1/345:346 | No text annotation | homologous IL_8C3A_411 NA | |
| IL_9F9S_399 | 1/S1/363:365, 1/S1/376:381 | No text annotation | homologous IL_8C3A_412 NA | |
| IL_9F9S_400 | 1/S1/389:391, 1/S1/406:408 | Isolated cWH basepair | homologous IL_8C3A_413 NA | |
| IL_9F9S_401 | 1/S1/411:413, 1/S1/420:422 | Isolated non-canonical cWW pair | homologous IL_8C3A_414 NA | |
| IL_9F9S_402 | 1/S1/439:441, 1/S1/463:464 | Single bulged U | homologous IL_8P9A_396 IL_97561.1 | |
| IL_9F9S_403 | 1/S1/443:447, 1/S1/460:461 | C-loop | homologous IL_8C3A_416 NA | |
| IL_9F9S_404 | 1/S1/447:448, 1/S1/458:460 | Single bulged G | homologous IL_8P9A_398 IL_28408.1 | |
| IL_9F9S_406 | 1/S1/514:516, 1/S1/536:543 | No text annotation | ||
| IL_9F9S_407 | 1/S1/517:518, 1/S1/533:535 | Minor groove platform | homologous IL_8C3A_501 NA | |
| IL_9F9S_408 | 1/S1/518:520, 1/S1/532:533 | Minor groove platform | homologous IL_8P9A_401 IL_34520.1 | |
| IL_9F9S_409 | 1/S1/550:557, 1/S1/587:588 | SSU/LSU pseudoknot | homologous IL_8C3A_423 NA | |
| IL_9F9S_410 | 1/S1/557:559, 1/S1/586:587 | Single bulged U | homologous IL_8P9A_403 IL_97561.1 | |
| IL_9F9S_411 | 1/S1/562:568, 1/S1/575:583 | No text annotation | homologous IL_8P9A_404 IL_52042.1 | |
| IL_9F9S_412 | 1/S1/616:622, 1/S1/1104:1105 | No text annotation | homologous IL_8C3A_426 NA | |
| IL_9F9S_413 | 1/S1/624:626, 1/S1/973:975 | Isolated non-canonical cWW pair | homologous IL_8C3A_427 NA | |
| IL_9F9S_414 | 1/S1/627:631, 1/S1/968:972 | tSH-tHW-tHS | homologous IL_8C3A_428 NA | |
| IL_9F9S_415 | 1/S1/646:648, 1/S1/686:688 | No text annotation | homologous IL_8P9A_408 IL_23751.1 | |
| IL_9F9S_416 | 1/S1/746:747, 1/S1/802:805 | Major groove minor groove platform; mini C-loop | homologous IL_8C3A_430 NA | |
| IL_9F9S_417 | 1/S1/748:750, 1/S1/799:801 | Isolated non-canonical cWW pair | homologous IL_8P9A_413 IL_71625.1 | |
| IL_9F9S_418 | 1/S1/751:759, 1/S1/791:798 | No text annotation | homologous IL_8C3A_503 NA | |
| IL_9F9S_419 | 1/S1/817:824, 1/S1/848:854 | No text annotation | ||
| IL_9F9S_420 | 1/S1/865:866, 1/S1/962:965 | Major groove platform; stack outside cWW | geometric IL_4V88_428 NA | |
| IL_9F9S_421 | 1/S1/868:870, 1/S1/957:960 | Isolated cWH basepair | homologous IL_8C3A_510 NA | |
| IL_9F9S_422 | 1/S1/871:873, 1/S1/954:956 | Isolated non-canonical cWW pair | geometric IL_2R8S_001 IL_01003.1 | |
| IL_9F9S_423 | 1/S1/874:878, 1/S1/950:953 | Tandem non-canonical cWW pairs | homologous IL_8P9A_420 IL_15225.1 | |
| IL_9F9S_424 | 1/S1/885:888, 1/S1/924:927 | Tandem non-canonical cWW pairs | homologous IL_8P9A_421 IL_15225.1 | |
| IL_9F9S_425 | 1/S1/893:899, 1/S1/910:919 | No text annotation | homologous IL_8P9A_422 IL_57741.1 | |
| IL_9F9S_426 | 1/S1/985:990, 1/S1/1014:1016 | No text annotation | homologous IL_8C3A_441 NA | |
| IL_9F9S_427 | 1/S1/990:994, 1/S1/1010:1014 | tSH-tHW-tHS | homologous IL_8C3A_442 NA | |
| IL_9F9S_428 | 1/S1/1034:1036, 1/S1/1095:1101 | No text annotation | homologous IL_8C3A_443 NA | |
| IL_9F9S_429 | 1/S1/1041:1044, 1/S1/1074:1077 | Tandem non-canonical cWW pairs | homologous IL_8P9A_426 IL_15225.1 | |
| IL_9F9S_430 | 1/S1/1051:1053, 1/S1/1066:1067 | Single bulged U | homologous IL_8P9A_427 IL_97561.1 | |
| IL_9F9S_431 | 1/S1/1111:1118, 1/S1/1129:1134 | 8x6 Sarcin-Ricin with inserted Y; G-bulge | homologous IL_8C3A_446 NA | |
| IL_9F9S_432 | 1/S1/1146:1147, 1/S1/1630:1632 | Single bulged A | homologous IL_8C3A_447 NA | |
| IL_9F9S_433 | 1/S1/1149:1151, 1/S1/1627:1628 | Single bulged G | homologous IL_8C3A_448 NA | |
| IL_9F9S_434 | 1/S1/1157:1160, 1/S1/1617:1621 | C-loop | homologous IL_8P9A_431 IL_63596.12 | |
| IL_9F9S_435 | 1/S1/1173:1175, 1/S1/1464:1466 | Isolated non-canonical cWW pair | homologous IL_8C3A_450 NA | |
| IL_9F9S_436 | 1/S1/1178:1179, 1/S1/1459:1461 | Minor groove platform | homologous IL_8C3A_451 NA | |
| IL_9F9S_437 | 1/S1/1213:1215, 1/S1/1448:1450 | Isolated non-canonical cWW pair | homologous IL_8C3A_452 NA | |
| IL_9F9S_441 | 1/S1/1234:1236, 1/S1/1249:1251 | No text annotation | homologous IL_8P9A_436 IL_38565.1 | |
| IL_9F9S_442 | 1/S1/1268:1270, 1/S1/1440:1441 | Single bulged U | homologous IL_8C3A_455 NA | |
| IL_9F9S_443 | 1/S1/1272:1276, 1/S1/1436:1438 | No text annotation | geometric IL_8C3A_456 NA | |
| IL_9F9S_444 | 1/S1/1272:1278, 1/S1/1430:1438 | No text annotation | geometric IL_4V88_510 NA | |
| IL_9F9S_445 | 1/S1/1276:1278, 1/S1/1430:1436 | No text annotation | homologous IL_8P9A_440 IL_93811.1 | |
| IL_9F9S_446 | 1/S1/1280:1281, 1/S1/1426:1428 | Single bulged A | homologous IL_8C3A_458 NA | |
| IL_9F9S_447 | 1/S1/1290:1292, 1/S1/1323:1325 | Isolated cWH basepair | homologous IL_8P9A_442 IL_10892.1 | |
| IL_9F9S_448 | 1/S1/1306:1308, 1/S1/1317:1318 | Minor groove platform | homologous IL_8P9A_443 IL_34520.1 | |
| IL_9F9S_449 | 1/S1/1339:1342, 1/S1/1383:1385 | Isolated non-canonical cWW pair | homologous IL_8P9A_444 IL_01003.1 | |
| IL_9F9S_450 | 1/S1/1345:1348, 1/S1/1377:1380 | No text annotation | homologous IL_8C3A_462 NA | |
| IL_9F9S_452 | 1/S1/1389:1391, 1/S1/1407:1412 | No text annotation | geometric IL_8C3A_465 NA | |
| IL_9F9S_453 | 1/S1/1480:1487, 1/S1/1519:1527 | No text annotation | homologous IL_8C3A_466 NA | |
| IL_9F9S_454 | 1/S1/1488:1494, 1/S1/1513:1518 | No text annotation | homologous IL_8P9A_449 IL_22564.1 | |
| IL_9F9S_455 | 1/S1/1495:1498, 1/S1/1509:1512 | Tandem non-canonical cWW pairs | homologous IL_8P9A_450 IL_71194.1 | |
| IL_9F9S_456 | 1/S1/1540:1545, 1/S1/1566:1571 | No text annotation | homologous IL_8C3A_507 NA | |
| IL_9F9S_457 | 1/S1/1636:1638, 1/S1/1764:1767 | No text annotation | homologous IL_8P9A_452 IL_18228.1 | |
| IL_9F9S_458 | 1/S1/1638:1641, 1/S1/1760:1764 | No text annotation | homologous IL_8C3A_471 NA | |
| IL_9F9S_459 | 1/S1/1642:1644, 1/S1/1757:1759 | Isolated non-canonical cWW pair | homologous IL_8C3A_472 NA | |
| IL_9F9S_460 | 1/S1/1644:1647, 1/S1/1753:1757 | Tandem non-canonical cWW pairs | geometric IL_1D4R_001 IL_15225.1 | |
| IL_9F9S_461 | 1/S1/1650:1652, 1/S1/1748:1750 | Isolated non-canonical cWW pair | homologous IL_8P9A_456 IL_01003.1 | |
| IL_9F9S_462 | 1/S1/1653:1656, 1/S1/1744:1747 | Double sheared | homologous IL_8P9A_457 IL_58355.1 | |
| IL_9F9S_463 | 1/S1/1656:1658, 1/S1/1743:1744 | Single bulged U | homologous IL_8P9A_458 IL_97561.1 | |
| IL_9F9S_464 | 1/S1/1665:1667, 1/S1/1734:1736 | Isolated non-canonical cWW pair | homologous IL_8C3A_477 NA | |
| IL_9F9S_465 | 1/S1/1669:1672, 1/S1/1729:1732 | Double sheared | homologous IL_8C3A_478 NA | |
| IL_9F9S_466 | 1/S1/1672:1674, 1/S1/1727:1729 | Isolated non-canonical cWW pair | homologous IL_8P9A_461 IL_01003.1 | |
| IL_9F9S_467 | 1/S1/1675:1678, 1/S1/1723:1726 | Tandem non-canonical cWW pairs | homologous IL_8P9A_462 IL_71194.1 | |
| IL_9F9S_468 | 1/S1/1678:1682, 1/S1/1719:1723 | Triple sheared | homologous IL_8C3A_480 NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_9F9S_471 | Tandem non-canonical cWW pairs | ||
| IL_9F9S_041 | No text annotation | ||
| IL_9F9S_045 | No text annotation | ||
| IL_9F9S_052 | No text annotation | ||
| IL_9F9S_053 | No text annotation | ||
| IL_9F9S_473 | No text annotation | ||
| IL_9F9S_062 | No text annotation | ||
| IL_9F9S_474 | No text annotation | ||
| IL_9F9S_064 | No text annotation | ||
| IL_9F9S_143 | No text annotation | ||
| IL_9F9S_153 | Single stack bend | ||
| IL_9F9S_186 | No text annotation | ||
| IL_9F9S_190 | No text annotation | ||
| IL_9F9S_198 | No text annotation | ||
| IL_9F9S_199 | No text annotation | ||
| IL_9F9S_239 | Multiple bulged bases | ||
| IL_9F9S_240 | No text annotation | ||
| IL_9F9S_241 | No text annotation | ||
| IL_9F9S_303 | Double sheared | ||
| IL_9F9S_308 | Single bulged U | ||
| IL_9F9S_326 | No text annotation | ||
| IL_9F9S_327 | No text annotation | ||
| IL_9F9S_328 | No text annotation | ||
| IL_9F9S_331 | No text annotation | ||
| IL_9F9S_352 | Tandem non-canonical cWW pairs | ||
| IL_9F9S_396 | Single bulged U | ||
| IL_9F9S_405 | Single bulged A | ||
| IL_9F9S_438 | No text annotation | ||
| IL_9F9S_439 | No text annotation | ||
| IL_9F9S_440 | No text annotation | ||
| IL_9F9S_451 | No text annotation | ||
| IL_9F9S_469 | Isolated tWW contact | ||
| IL_9F9S_470 | Isolated cWH basepair |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_9F9S_001 | 1/L1/113:123, 1/L1/149:158, 1/L1/263:267 | No text annotation | homologous J3_8C3A_001 NA | |
| J3_9F9S_002 | 1/L1/113:124, 1/L1/144:158, 1/L1/263:267 | No text annotation | ||
| J3_9F9S_003 | 1/L1/185:189, 1/L1/205:214, 1/L1/226:231 | No text annotation | homologous J3_8P9A_044 J3_97456.1 | |
| J3_9F9S_004 | 1/L1/340:356, 1/L1/363:368, 1/L2/21:24 | No text annotation | homologous J3_8P9A_045 J3_07616.1 | |
| J3_9F9S_005 | 1/L1/369:376, 1/L1/403:404, 1/L2/19:20 | No text annotation | geometric J3_5TBW_002 NA | |
| J3_9F9S_006 | 1/L1/369:379, 1/L1/390:404, 1/L2/19:20 | No text annotation | homologous J3_8P9A_047 J3_17917.1 | |
| J3_9F9S_007 | 1/L1/502:503, 1/L1/588:597, 1/L1/606:611 | No text annotation | homologous J3_8P9A_048 J3_86133.1 | |
| J3_9F9S_008 | 1/L1/814:820, 1/L1/905:907, 1/L1/923:926 | No text annotation | homologous J3_8C3A_003 NA | |
| J3_9F9S_009 | 1/L1/828:831, 1/L1/863:867, 1/L1/892:897 | No text annotation | homologous J3_8P9A_050 J3_21998.1 | |
| J3_9F9S_010 | 1/L1/986:987, 1/L1/1062:1066, 1/L1/1092:1098 | No text annotation | homologous J3_8P9A_051 J3_84137.1 | |
| J3_9F9S_013 | 1/L1/1479:1485, 1/L1/1857:1859, 1/L1/1871:1874 | No text annotation | homologous J3_8C3A_006 NA | |
| J3_9F9S_014 | 1/L1/1488:1491, 1/L1/1837:1843, 1/L1/1852:1854 | No text annotation | homologous J3_8P9A_054 J3_76012.1 | |
| J3_9F9S_015 | 1/L1/1526:1531, 1/L1/1591:1595, 1/L1/1612:1613 | No text annotation | homologous J3_8C3A_052 NA | |
| J3_9F9S_016 | 1/L1/1537:1542, 1/L1/1551:1560, 1/L1/1579:1584 | No text annotation | ||
| J3_9F9S_017 | 1/L1/1631:1632, 1/L1/1641:1645, 1/L1/1810:1811 | No text annotation | homologous J3_8C3A_054 NA | |
| J3_9F9S_018 | 1/L1/1654:1658, 1/L1/1791:1792, 1/L1/1796:1801 | No text annotation | homologous J3_8P9A_058 J3_08594.1 | |
| J3_9F9S_019 | 1/L1/2432:2435, 1/L1/2512:2517, 1/L1/2590:2597 | No text annotation | homologous J3_8C3A_008 NA | |
| J3_9F9S_020 | 1/L1/2529:2532, 1/L1/2547:2563, 1/L1/2578:2581 | No text annotation | homologous J3_8C3A_009 NA | |
| J3_9F9S_021 | 1/L1/2651:2653, 1/L1/2754:2765, 1/L1/2793:2798 | No text annotation | homologous J3_8P9A_061 J3_04772.1 | |
| J3_9F9S_022 | 1/L1/2664:2666, 1/L1/2690:2692, 1/L1/2701:2706 | No text annotation | homologous J3_8P9A_062 J3_05327.1 | |
| J3_9F9S_023 | 1/L1/2886:2889, 1/L1/2914:2916, 1/L1/2930:2936 | No text annotation | homologous J3_8C3A_011 NA | |
| J3_9F9S_024 | 1/L1/3171:3176, 1/L1/3212:3220, 1/L1/3265:3279 | No text annotation | homologous J3_8P9A_064 J3_03190.1 | |
| J3_9F9S_025 | 1/L1/3298:3300, 1/L1/3314:3318, 1/L1/3388:3390 | No text annotation | homologous J3_8P9A_065 J3_81015.1 | |
| J3_9F9S_026 | 1/L2/44:45, 1/L2/58:64, 1/L2/96:100 | No text annotation | homologous J3_8P9A_067 J3_01004.1 | |
| J3_9F9S_027 | 1/L3/9:14, 1/L3/66:67, 1/L3/111:112 | No text annotation | homologous J3_8P9A_066 J3_26985.1 | |
| J3_9F9S_028 | 1/M1/113:123, 1/M1/149:158, 1/M1/263:267 | No text annotation | homologous J3_8C3A_001 NA | |
| J3_9F9S_029 | 1/M1/113:124, 1/M1/144:158, 1/M1/263:267 | No text annotation | ||
| J3_9F9S_030 | 1/M1/185:189, 1/M1/205:214, 1/M1/226:231 | No text annotation | homologous J3_8P9A_044 J3_97456.1 | |
| J3_9F9S_031 | 1/M1/340:356, 1/M1/363:368, 1/M2/21:24 | No text annotation | homologous J3_8P9A_045 J3_07616.1 | |
| J3_9F9S_032 | 1/M1/369:376, 1/M1/403:404, 1/M2/19:20 | No text annotation | geometric J3_5TBW_002 NA | |
| J3_9F9S_033 | 1/M1/369:379, 1/M1/390:404, 1/M2/19:20 | No text annotation | homologous J3_8C3A_049 NA | |
| J3_9F9S_034 | 1/M1/502:503, 1/M1/588:597, 1/M1/606:611 | No text annotation | homologous J3_8P9A_048 J3_86133.1 | |
| J3_9F9S_035 | 1/M1/814:820, 1/M1/905:907, 1/M1/923:926 | No text annotation | homologous J3_8C3A_003 NA | |
| J3_9F9S_036 | 1/M1/829:831, 1/M1/863:867, 1/M1/892:895 | No text annotation | homologous J3_8C3A_004 NA | |
| J3_9F9S_037 | 1/M1/986:987, 1/M1/1062:1066, 1/M1/1092:1098 | No text annotation | homologous J3_8C3A_051 NA | |
| J3_9F9S_039 | 1/M1/1479:1485, 1/M1/1857:1859, 1/M1/1871:1874 | No text annotation | homologous J3_8P9A_053 J3_05025.1 | |
| J3_9F9S_040 | 1/M1/1488:1491, 1/M1/1837:1843, 1/M1/1852:1854 | No text annotation | homologous J3_8P9A_054 J3_76012.1 | |
| J3_9F9S_041 | 1/M1/1526:1531, 1/M1/1591:1595, 1/M1/1612:1613 | No text annotation | homologous J3_8P9A_055 J3_94309.1 | |
| J3_9F9S_042 | 1/M1/1537:1542, 1/M1/1551:1561, 1/M1/1579:1584 | No text annotation | ||
| J3_9F9S_043 | 1/M1/1631:1632, 1/M1/1641:1645, 1/M1/1810:1811 | No text annotation | homologous J3_8C3A_054 NA | |
| J3_9F9S_044 | 1/M1/1654:1658, 1/M1/1791:1792, 1/M1/1796:1801 | No text annotation | homologous J3_8P9A_058 J3_08594.1 | |
| J3_9F9S_045 | 1/M1/2432:2435, 1/M1/2512:2517, 1/M1/2590:2597 | No text annotation | homologous J3_8C3A_008 NA | |
| J3_9F9S_046 | 1/M1/2529:2532, 1/M1/2547:2563, 1/M1/2578:2581 | No text annotation | homologous J3_8P9A_060 J3_76247.1 | |
| J3_9F9S_047 | 1/M1/2651:2653, 1/M1/2754:2765, 1/M1/2793:2798 | No text annotation | homologous J3_8P9A_061 J3_04772.1 | |
| J3_9F9S_048 | 1/M1/2664:2666, 1/M1/2690:2692, 1/M1/2701:2706 | No text annotation | homologous J3_8P9A_062 J3_05327.1 | |
| J3_9F9S_049 | 1/M1/2886:2889, 1/M1/2914:2916, 1/M1/2930:2936 | No text annotation | homologous J3_8C3A_011 NA | |
| J3_9F9S_050 | 1/M1/3171:3176, 1/M1/3212:3220, 1/M1/3265:3279 | No text annotation | homologous J3_8P9A_064 J3_03190.1 | |
| J3_9F9S_051 | 1/M1/3298:3300, 1/M1/3314:3318, 1/M1/3388:3390 | No text annotation | homologous J3_8P9A_065 J3_81015.1 | |
| J3_9F9S_052 | 1/M2/44:45, 1/M2/58:64, 1/M2/96:100 | No text annotation | homologous J3_8P9A_067 J3_01004.1 | |
| J3_9F9S_053 | 1/M3/9:14, 1/M3/66:67, 1/M3/111:112 | No text annotation | homologous J3_8P9A_066 J3_26985.1 | |
| J3_9F9S_054 | 1/R1/41:42, 1/R1/433:439, 1/R1/464:466 | No text annotation | geometric J3_8C3A_082 NA | |
| J3_9F9S_055 | 1/R1/41:48, 1/R1/431:439, 1/R1/464:466 | No text annotation | homologous J3_8P9A_069 J3_63856.1 | |
| J3_9F9S_056 | 1/R1/213:228, 1/R1/237:243, 1/R1/250:252 | No text annotation | ||
| J3_9F9S_057 | 1/R1/633:635, 1/R1/861:865, 1/R1/965:966 | No text annotation | geometric J3_4V88_080 NA | |
| J3_9F9S_058 | 1/R1/633:635, 1/R1/861:866, 1/R1/962:966 | No text annotation | homologous J3_8P9A_072 J3_17385.5 | |
| J3_9F9S_059 | 1/R1/760:763, 1/R1/773:775, 1/R1/785:790 | No text annotation | homologous J3_8P9A_073 J3_97642.2 | |
| J3_9F9S_060 | 1/R1/881:884, 1/R1/928:936, 1/R1/943:947 | No text annotation | homologous J3_8P9A_074 J3_23895.1 | |
| J3_9F9S_061 | 1/R1/1037:1039, 1/R1/1079:1083, 1/R1/1090:1094 | No text annotation | homologous J3_8P9A_075 J3_94999.1 | |
| J3_9F9S_062 | 1/R1/1161:1164, 1/R1/1581:1587, 1/R1/1609:1616 | No text annotation | homologous J3_8C3A_038 NA | |
| J3_9F9S_063 | 1/R1/1168:1171, 1/R1/1468:1470, 1/R1/1574:1577 | No text annotation | homologous J3_8C3A_039 NA | |
| J3_9F9S_064 | 1/R1/1180:1187, 1/R1/1198:1209, 1/R1/1454:1458 | No text annotation | homologous J3_8C3A_040 NA | |
| J3_9F9S_065 | 1/R1/1215:1220, 1/R1/1263:1267, 1/R1/1442:1448 | No text annotation | homologous J3_8C3A_041 NA | |
| J3_9F9S_066 | 1/R1/1283:1288, 1/R1/1327:1332, 1/R1/1419:1424 | No text annotation | homologous J3_8P9A_080 J3_17077.1 | |
| J3_9F9S_067 | 1/R1/1293:1294, 1/R1/1303:1306, 1/R1/1318:1322 | No text annotation | homologous J3_8C3A_085 NA | |
| J3_9F9S_068 | 1/R1/1336:1338, 1/R1/1386:1389, 1/R1/1412:1415 | No text annotation | geometric J3_4V88_040 NA | |
| J3_9F9S_069 | 1/R1/1336:1338, 1/R1/1386:1391, 1/R1/1407:1415 | No text annotation | homologous J3_8C3A_086 NA | |
| J3_9F9S_070 | 1/R1/1470:1474, 1/R1/1533:1540, 1/R1/1571:1574 | No text annotation | homologous J3_8P9A_084 J3_03192.1 | |
| J3_9F9S_071 | 1/S1/41:42, 1/S1/433:439, 1/S1/464:466 | No text annotation | geometric J3_8C3A_082 NA | |
| J3_9F9S_072 | 1/S1/41:48, 1/S1/431:439, 1/S1/464:466 | No text annotation | homologous J3_8P9A_069 J3_63856.1 | |
| J3_9F9S_073 | 1/S1/213:228, 1/S1/237:243, 1/S1/250:252 | No text annotation | ||
| J3_9F9S_074 | 1/S1/633:635, 1/S1/861:865, 1/S1/965:966 | No text annotation | geometric J3_4V88_080 NA | |
| J3_9F9S_075 | 1/S1/633:635, 1/S1/861:866, 1/S1/962:966 | No text annotation | homologous J3_8P9A_072 J3_17385.5 | |
| J3_9F9S_076 | 1/S1/760:763, 1/S1/773:775, 1/S1/785:790 | No text annotation | homologous J3_8P9A_073 J3_97642.2 | |
| J3_9F9S_077 | 1/S1/881:884, 1/S1/928:936, 1/S1/943:947 | No text annotation | homologous J3_8P9A_074 J3_23895.1 | |
| J3_9F9S_078 | 1/S1/1037:1039, 1/S1/1079:1083, 1/S1/1090:1094 | No text annotation | homologous J3_8P9A_075 J3_94999.1 | |
| J3_9F9S_079 | 1/S1/1161:1164, 1/S1/1581:1587, 1/S1/1609:1616 | No text annotation | homologous J3_8C3A_038 NA | |
| J3_9F9S_080 | 1/S1/1168:1171, 1/S1/1468:1470, 1/S1/1574:1577 | No text annotation | homologous J3_8C3A_039 NA | |
| J3_9F9S_081 | 1/S1/1180:1187, 1/S1/1198:1209, 1/S1/1454:1458 | No text annotation | homologous J3_8C3A_040 NA | |
| J3_9F9S_082 | 1/S1/1215:1220, 1/S1/1263:1267, 1/S1/1442:1448 | No text annotation | homologous J3_8C3A_041 NA | |
| J3_9F9S_083 | 1/S1/1283:1288, 1/S1/1327:1332, 1/S1/1419:1424 | No text annotation | homologous J3_8P9A_080 J3_17077.1 | |
| J3_9F9S_084 | 1/S1/1293:1294, 1/S1/1303:1306, 1/S1/1318:1322 | No text annotation | homologous J3_8C3A_085 NA | |
| J3_9F9S_085 | 1/S1/1336:1338, 1/S1/1386:1389, 1/S1/1412:1415 | No text annotation | geometric J3_4V88_040 NA | |
| J3_9F9S_086 | 1/S1/1336:1338, 1/S1/1386:1391, 1/S1/1407:1415 | No text annotation | homologous J3_8C3A_086 NA | |
| J3_9F9S_087 | 1/S1/1470:1474, 1/S1/1533:1540, 1/S1/1571:1574 | No text annotation | homologous J3_8C3A_044 NA | |
| J4_9F9S_001 | 1/CP/7:10, 1/CP/25:27, 1/CP/43:49, 1/CP/65:66 | tRNA junction | homologous J4_3TUP_001 J4_58311.1 | |
| J4_9F9S_003 | 1/DQ/7:10, 1/DQ/26:28, 1/DQ/44:50, 1/DQ/66:67 | tRNA junction | homologous J4_7MRL_001 NA | |
| J4_9F9S_004 | 1/L1/112:113, 1/L1/267:272, 1/L1/293:299, 1/L1/316:319 | No text annotation | homologous J4_8P9A_012 J4_94698.1 | |
| J4_9F9S_005 | 1/L1/185:189, 1/L1/205:208, 1/L1/212:214, 1/L1/226:231 | No text annotation | homologous J4_8P9A_013 J4_43318.1 | |
| J4_9F9S_006 | 1/L1/1451:1457, 1/L1/1475:1476, 1/L1/1877:1880, 1/L1/2352:2353 | No text annotation | homologous J4_8C3A_003 NA | |
| J4_9F9S_007 | 1/L1/1492:1496, 1/L1/1520:1525, 1/L1/1614:1615, 1/L1/1829:1836 | No text annotation | homologous J4_8P9A_015 J4_47264.1 | |
| J4_9F9S_008 | 1/L1/1674:1675, 1/L1/1693:1694, 1/L1/1752:1753, 1/L1/1772:1773 | No text annotation | homologous J4_8C3A_005 NA | |
| J4_9F9S_009 | 1/L1/2130:2134, 1/L1/2146:2150, 1/L1/2186:2190, 1/L1/2317:2322 | No text annotation | homologous J4_8C3A_006 NA | |
| J4_9F9S_010 | 1/L1/2192:2194, 1/L1/2248:2249, 1/L1/2267:2276, 1/L1/2310:2315 | No text annotation | homologous J4_8C3A_007 NA | |
| J4_9F9S_011 | 1/L1/2654:2658, 1/L1/2712:2716, 1/L1/2740:2742, 1/L1/2751:2753 | No text annotation | homologous J4_8C3A_008 NA | |
| J4_9F9S_012 | 1/L1/3010:3012, 1/L1/3042:3043, 1/L1/3098:3100, 1/L1/3134:3136 | No text annotation | homologous J4_8P9A_020 J4_37757.1 | |
| J4_9F9S_013 | 1/M1/112:113, 1/M1/267:272, 1/M1/293:299, 1/M1/316:319 | No text annotation | homologous J4_8P9A_012 J4_94698.1 | |
| J4_9F9S_014 | 1/M1/185:189, 1/M1/205:208, 1/M1/212:214, 1/M1/226:231 | No text annotation | homologous J4_8P9A_013 J4_43318.1 | |
| J4_9F9S_015 | 1/M1/1451:1457, 1/M1/1475:1476, 1/M1/1877:1880, 1/M1/2352:2353 | No text annotation | homologous J4_8P9A_014 J4_34212.1 | |
| J4_9F9S_016 | 1/M1/1492:1496, 1/M1/1520:1525, 1/M1/1614:1615, 1/M1/1829:1836 | No text annotation | homologous J4_8P9A_015 J4_47264.1 | |
| J4_9F9S_017 | 1/M1/1674:1675, 1/M1/1693:1694, 1/M1/1752:1753, 1/M1/1772:1773 | No text annotation | homologous J4_8C3A_005 NA | |
| J4_9F9S_018 | 1/M1/2130:2134, 1/M1/2146:2150, 1/M1/2186:2190, 1/M1/2317:2322 | No text annotation | homologous J4_8P9A_017 J4_78485.1 | |
| J4_9F9S_019 | 1/M1/2192:2194, 1/M1/2248:2249, 1/M1/2267:2276, 1/M1/2310:2315 | No text annotation | homologous J4_8P9A_018 J4_42306.1 | |
| J4_9F9S_020 | 1/M1/2654:2658, 1/M1/2712:2714, 1/M1/2741:2742, 1/M1/2751:2753 | No text annotation | ||
| J4_9F9S_021 | 1/M1/2654:2658, 1/M1/2712:2716, 1/M1/2740:2742, 1/M1/2751:2753 | No text annotation | homologous J4_8C3A_008 NA | |
| J4_9F9S_022 | 1/M1/3010:3012, 1/M1/3042:3043, 1/M1/3098:3100, 1/M1/3134:3136 | No text annotation | homologous J4_8P9A_020 J4_37757.1 | |
| J4_9F9S_023 | 1/R1/99:107, 1/R1/307:309, 1/R1/357:361, 1/R1/383:384 | No text annotation | homologous J4_8C3A_021 NA | |
| J4_9F9S_024 | 1/R1/622:624, 1/R1/975:980, 1/R1/1021:1032, 1/R1/1103:1104 | No text annotation | homologous J4_8P9A_022 J4_14595.1 | |
| J4_9F9S_025 | 1/S1/99:107, 1/S1/307:309, 1/S1/357:361, 1/S1/383:384 | No text annotation | homologous J4_8C3A_021 NA | |
| J4_9F9S_026 | 1/S1/622:624, 1/S1/975:980, 1/S1/1021:1032, 1/S1/1103:1104 | No text annotation | homologous J4_8C3A_022 NA | |
| J5_9F9S_001 | 1/L1/20:22, 1/L2/35:42, 1/L2/102:107, 1/L2/115:116, 1/L2/137:139 | No text annotation | homologous J5_8C3A_001 NA | |
| J5_9F9S_002 | 1/L1/658:663, 1/L1/799:802, 1/L1/941:944, 1/L1/1375:1376, 1/L1/1431:1437 | No text annotation | homologous J5_8C3A_002 NA | |
| J5_9F9S_003 | 1/L1/675:678, 1/L1/702:706, 1/L1/713:721, 1/L1/749:751, 1/L1/782:787 | No text annotation | homologous J5_8P9A_012 J5_56629.1 | |
| J5_9F9S_004 | 1/L1/1906:1914, 1/L1/1938:1939, 1/L1/2109:2110, 1/L1/2114:2122, 1/L1/2331:2333 | No text annotation | homologous J5_8P9A_013 J5_99177.1 | |
| J5_9F9S_005 | 1/L1/2399:2406, 1/L1/2815:2823, 1/L1/2867:2876, 1/L1/2951:2957, 1/L1/2975:2980 | No text annotation | ||
| J5_9F9S_006 | 1/L1/2416:2419, 1/L1/2611:2614, 1/L1/2627:2628, 1/L1/2650:2651, 1/L1/2798:2804 | No text annotation | homologous J5_8P9A_015 J5_96125.1 | |
| J5_9F9S_007 | 1/M1/20:22, 1/M2/35:42, 1/M2/102:107, 1/M2/115:116, 1/M2/137:139 | No text annotation | homologous J5_8P9A_010 J5_27223.1 | |
| J5_9F9S_008 | 1/M1/658:663, 1/M1/799:802, 1/M1/941:944, 1/M1/1375:1376, 1/M1/1431:1437 | No text annotation | homologous J5_8P9A_011 J5_08384.1 | |
| J5_9F9S_009 | 1/M1/675:678, 1/M1/702:706, 1/M1/713:721, 1/M1/749:751, 1/M1/782:787 | No text annotation | homologous J5_8P9A_012 J5_56629.1 | |
| J5_9F9S_010 | 1/M1/1906:1914, 1/M1/1938:1939, 1/M1/2109:2110, 1/M1/2114:2122, 1/M1/2331:2333 | No text annotation | homologous J5_8P9A_013 J5_99177.1 | |
| J5_9F9S_011 | 1/M1/2399:2406, 1/M1/2815:2823, 1/M1/2867:2876, 1/M1/2951:2957, 1/M1/2975:2980 | No text annotation | ||
| J5_9F9S_012 | 1/M1/2416:2419, 1/M1/2611:2614, 1/M1/2627:2628, 1/M1/2650:2651, 1/M1/2798:2804 | No text annotation | homologous J5_8P9A_015 J5_96125.1 | |
| J5_9F9S_013 | 1/R1/31:35, 1/R1/473:479, 1/R1/509:514, 1/R1/543:546, 1/R1/592:595 | No text annotation | homologous J5_8C3A_018 NA | |
| J5_9F9S_014 | 1/R1/54:57, 1/R1/90:97, 1/R1/386:391, 1/R1/406:411, 1/R1/422:426 | No text annotation | ||
| J5_9F9S_015 | 1/R1/124:143, 1/R1/172:182, 1/R1/203:204, 1/R1/263:265, 1/R1/289:293 | No text annotation | ||
| J5_9F9S_016 | 1/R1/124:143, 1/R1/172:182, 1/R1/203:204, 1/R1/263:267, 1/R1/288:293 | No text annotation | ||
| J5_9F9S_017 | 1/R1/636:642, 1/R1/692:701, 1/R1/737:744, 1/R1/807:817, 1/R1/854:860 | No text annotation | ||
| J5_9F9S_018 | 1/S1/31:35, 1/S1/473:479, 1/S1/509:514, 1/S1/543:546, 1/S1/592:595 | No text annotation | homologous J5_8C3A_018 NA | |
| J5_9F9S_019 | 1/S1/54:57, 1/S1/90:97, 1/S1/386:388, 1/S1/409:411, 1/S1/422:426 | No text annotation | homologous J5_8C3A_020 NA | |
| J5_9F9S_020 | 1/S1/124:143, 1/S1/172:182, 1/S1/203:204, 1/S1/263:265, 1/S1/289:293 | No text annotation | ||
| J5_9F9S_021 | 1/S1/124:143, 1/S1/172:182, 1/S1/203:204, 1/S1/263:267, 1/S1/288:293 | No text annotation | ||
| J5_9F9S_022 | 1/S1/636:641, 1/S1/693:699, 1/S1/739:744, 1/S1/807:817, 1/S1/854:860 | No text annotation | ||
| J6_9F9S_001 | 1/L1/22:27, 1/L1/58:68, 1/L1/75:79, 1/L1/106:110, 1/L1/321:331, 1/L2/32:35 | No text annotation | ||
| J6_9F9S_002 | 1/L1/2416:2419, 1/L1/2611:2614, 1/L1/2627:2628, 1/L1/2650:2653, 1/L1/2754:2765, 1/L1/2793:2804 | No text annotation | ||
| J6_9F9S_003 | 1/M1/22:27, 1/M1/58:68, 1/M1/75:79, 1/M1/106:110, 1/M1/321:331, 1/M2/32:35 | No text annotation | ||
| J6_9F9S_004 | 1/M1/2416:2419, 1/M1/2611:2614, 1/M1/2627:2628, 1/M1/2650:2653, 1/M1/2754:2765, 1/M1/2793:2804 | No text annotation | ||
| J7_9F9S_001 | 1/L1/949:954, 1/L1/967:968, 1/L1/1114:1117, 1/L1/1141:1146, 1/L1/1157:1161, 1/L1/1338:1339, 1/L1/1365:1370 | No text annotation | ||
| J7_9F9S_002 | 1/M1/949:954, 1/M1/967:968, 1/M1/1114:1117, 1/M1/1141:1146, 1/M1/1157:1161, 1/M1/1338:1339, 1/M1/1365:1370 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| J3_9F9S_011 | No text annotation | ||
| J3_9F9S_012 | No text annotation | ||
| J3_9F9S_088 | No text annotation | ||
| J3_9F9S_038 | No text annotation | ||
| J4_9F9S_002 | tRNA junction |
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