HL_9F9S_231
3D structure
- PDB id
- 9F9S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast SDD1 Disome with Mbf1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUCAUCAGC
- Length
- 9 nucleotides
- Bulged bases
- 9F9S|1|S1|G|1601
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9F9S_231 not in the Motif Atlas
- Homologous match to HL_8P9A_223
- Geometric discrepancy: 0.1755
- The information below is about HL_8P9A_223
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9F9S|1|S1|G|1594
9F9S|1|S1|U|1595
9F9S|1|S1|C|1596
9F9S|1|S1|A|1597
9F9S|1|S1|U|1598
9F9S|1|S1|C|1599
9F9S|1|S1|A|1600
9F9S|1|S1|G|1601
9F9S|1|S1|C|1602
Current chains
- Chain S1
- Saccharomyces cerevisiae S288C 18S ribosomal RNA (RDN18-1)
Nearby chains
- Chain SD
- Small ribosomal subunit protein uS14A
- Chain Sq
- 40S ribosomal protein S16-A
- Chain St
- 40S ribosomal protein S19-A
- Chain Su
- Small ribosomal subunit protein uS10
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