HL_9FCO_006
3D structure
- PDB id
- 9FCO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E. coli 30S-IF1-IF3-mRNA-Kasugamycin complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GGUAACGGC
- Length
- 9 nucleotides
- Bulged bases
- 9FCO|1|B|G|266
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9FCO_006 not in the Motif Atlas
- Homologous match to HL_5J7L_006
- Geometric discrepancy: 0.0647
- The information below is about HL_5J7L_006
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_84299.4
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
9FCO|1|B|G|259
9FCO|1|B|G|260
9FCO|1|B|U|261
9FCO|1|B|A|262
9FCO|1|B|A|263
9FCO|1|B|C|264
9FCO|1|B|G|265
9FCO|1|B|G|266
9FCO|1|B|C|267
Current chains
- Chain B
- 16S rRNA
Nearby chains
- Chain Q
- Small ribosomal subunit protein uS17
- Chain T
- Small ribosomal subunit protein bS20
Coloring options: