HL_9FQZ_045
3D structure
- PDB id
- 9FQZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF HCT15 POLYSOMES BOUND TO EEF2, EBP1, AND SERBP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.85 Å
Loop
- Sequence
- GGGAACGGGC
- Length
- 10 nucleotides
- Bulged bases
- 9FQZ|1|L5|A|3876, 9FQZ|1|L5|A|3877, 9FQZ|1|L5|C|3878
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9FQZ_045 not in the Motif Atlas
- Homologous match to HL_8GLP_055
- Geometric discrepancy: 0.0482
- The information below is about HL_8GLP_055
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78372.4
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
9FQZ|1|L5|G|3873
9FQZ|1|L5|G|3874
9FQZ|1|L5|G|3875
9FQZ|1|L5|A|3876
9FQZ|1|L5|A|3877
9FQZ|1|L5|C|3878
9FQZ|1|L5|G|3879
9FQZ|1|L5|G|3880
9FQZ|1|L5|G|3881
9FQZ|1|L5|C|3882
Current chains
- Chain L5
- LSU rRNA
Nearby chains
- Chain LB
- 60S ribosomal protein L3
- Chain Le
- 60S ribosomal protein L32
Coloring options: