HL_9FQZ_071
3D structure
- PDB id
- 9FQZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF HCT15 POLYSOMES BOUND TO EEF2, EBP1, AND SERBP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.85 Å
Loop
- Sequence
- GGUGACUC
- Length
- 8 nucleotides
- Bulged bases
- 9FQZ|1|S2|C|293, 9FQZ|1|S2|U|294
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9FQZ_071 not in the Motif Atlas
- Homologous match to HL_9PN5_082
- Geometric discrepancy: 0.2691
- The information below is about HL_9PN5_082
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_67772.4
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
9FQZ|1|S2|G|288
9FQZ|1|S2|G|289
9FQZ|1|S2|U|290
9FQZ|1|S2|G|291
9FQZ|1|S2|A|292
9FQZ|1|S2|C|293
9FQZ|1|S2|U|294
9FQZ|1|S2|C|295
Current chains
- Chain S2
- SSU rRNA
Nearby chains
- Chain SE
- 40S ribosomal protein S4, X isoform
- Chain SG
- 40S ribosomal protein S6
- Chain SL
- 40S ribosomal protein S11
Coloring options: