HL_9FQZ_080

3D structure

PDB id

9FQZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF HCT15 POLYSOMES BOUND TO EEF2, EBP1, AND SERBP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

AGGUGAAAUU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9FQZ|1|S2|A|957
9FQZ|1|S2|G|958
9FQZ|1|S2|G|959
9FQZ|1|S2|U|960
9FQZ|1|S2|G|961
9FQZ|1|S2|A|962
9FQZ|1|S2|A|963
9FQZ|1|S2|A|964
9FQZ|1|S2|U|965
9FQZ|1|S2|U|966

Current chains

Chain S2

SSU rRNA

Nearby chains

Chain L5

Large subunit ribosomal RNA; LSU rRNA

Chain SO

40S ribosomal protein S14