HL_9G06_007

3D structure

PDB id

9G06 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of 30S-IF1-IF3-mRNA-fMet-tRNA-GE81112A complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

9G06|1|B|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9G06_007 not in the Motif Atlas

Homologous match to HL_4LFB_009

Geometric discrepancy: 0.1053

The information below is about HL_4LFB_009

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

60

Unit IDs

9G06|1|B|C|342
9G06|1|B|U|343
9G06|1|B|A|344
9G06|1|B|C|345
9G06|1|B|G|346
9G06|1|B|G|347

Current chains

Chain B

16S ribosomal RNA

Nearby chains