3D structure

PDB id
9G06 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of 30S-IF1-IF3-mRNA-fMet-tRNA-GE81112A complex
Experimental method
ELECTRON MICROSCOPY
Resolution
2.85 Å

Loop

Sequence
CUACGG
Length
6 nucleotides
Bulged bases
9G06|1|B|A|344
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_9G06_007 not in the Motif Atlas
Homologous match to HL_4LFB_009
Geometric discrepancy: 0.1053
The information below is about HL_4LFB_009
Detailed Annotation
UNCG
Broad Annotation
No text annotation
Motif group
HL_61337.1
Basepair signature
cWW-tSW-F
Number of instances in this motif group
49

Unit IDs

9G06|1|B|C|342
9G06|1|B|U|343
9G06|1|B|A|344
9G06|1|B|C|345
9G06|1|B|G|346
9G06|1|B|G|347

Current chains

Chain B
16S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.2854 s