HL_9G06_025
3D structure
- PDB id
- 9G06 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of 30S-IF1-IF3-mRNA-fMet-tRNA-GE81112A complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.85 Å
Loop
- Sequence
- CUGCAACUCG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9G06_025 not in the Motif Atlas
- Homologous match to HL_4LFB_029
- Geometric discrepancy: 0.0896
- The information below is about HL_4LFB_029
- Detailed Annotation
- T-loop with 3 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_02887.3
- Basepair signature
- cWW-tWH-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
9G06|1|B|C|1314
9G06|1|B|U|1315
9G06|1|B|G|1316
9G06|1|B|C|1317
9G06|1|B|A|1318
9G06|1|B|A|1319
9G06|1|B|C|1320
9G06|1|B|U|1321
9G06|1|B|C|1322
9G06|1|B|G|1323
Current chains
- Chain B
- 16S ribosomal RNA
Nearby chains
- Chain M
- Small ribosomal subunit protein uS13
- Chain N
- Small ribosomal subunit protein uS14
- Chain S
- Small ribosomal subunit protein uS19
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