HL_9G1Z_027

3D structure

PDB id

9G1Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UGUAACAA

Length

8 nucleotides

Bulged bases

9G1Z|1|1|C|1268

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9G1Z_027 not in the Motif Atlas

Homologous match to HL_8P9A_140

Geometric discrepancy: 0.4529

The information below is about HL_8P9A_140

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_98423.3

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

15

Unit IDs

9G1Z|1|1|U|1263
9G1Z|1|1|G|1264
9G1Z|1|1|U|1265
9G1Z|1|1|A|1266
9G1Z|1|1|A|1267
9G1Z|1|1|C|1268
9G1Z|1|1|A|1269
9G1Z|1|1|A|1270

Current chains

Chain 1

25S rRNA

Nearby chains