HL_9G1Z_074
3D structure
- PDB id
- 9G1Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UGAAUUGCAGAUAUUCGUGAA
- Length
- 21 nucleotides
- Bulged bases
- 9G1Z|1|4|U|80, 9G1Z|1|4|C|84, 9G1Z|1|4|U|86
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9G1Z_074 not in the Motif Atlas
- Homologous match to HL_8CRE_075
- Geometric discrepancy: 0.0666
- The information below is about HL_8CRE_075
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_51921.1
- Basepair signature
- cWW-tSH-tSS-tHS-F-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
9G1Z|1|4|U|69
9G1Z|1|4|G|70
9G1Z|1|4|A|71
9G1Z|1|4|A|72
9G1Z|1|4|U|73
9G1Z|1|4|U|74
9G1Z|1|4|G|75
9G1Z|1|4|C|76
9G1Z|1|4|A|77
9G1Z|1|4|G|78
9G1Z|1|4|A|79
9G1Z|1|4|U|80
9G1Z|1|4|A|81
9G1Z|1|4|U|82
9G1Z|1|4|U|83
9G1Z|1|4|C|84
9G1Z|1|4|G|85
9G1Z|1|4|U|86
9G1Z|1|4|G|87
9G1Z|1|4|A|88
9G1Z|1|4|A|89
Current chains
- Chain 4
- 5.8S rRNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain 9
- Ribosomal 60S subunit protein L26B
- Chain AI
- Ribosomal 60S subunit protein L35A
- Chain AK
- Ribosomal protein L37
- Chain AM
- 60S ribosomal protein L39
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