HL_9G1Z_107
3D structure
- PDB id
- 9G1Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUCAUCAGC
- Length
- 9 nucleotides
- Bulged bases
- 9G1Z|1|A|C|1583, 9G1Z|1|A|G|1588
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9G1Z_107 not in the Motif Atlas
- Homologous match to HL_8CRE_224
- Geometric discrepancy: 0.073
- The information below is about HL_8CRE_224
- Detailed Annotation
- T-loop with 1 bulged base
- Broad Annotation
- T-loop
- Motif group
- HL_61418.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
9G1Z|1|A|G|1581
9G1Z|1|A|U|1582
9G1Z|1|A|C|1583
9G1Z|1|A|A|1584
9G1Z|1|A|U|1585
9G1Z|1|A|C|1586
9G1Z|1|A|A|1587
9G1Z|1|A|G|1588
9G1Z|1|A|C|1589
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain E
- Ribosomal 40S subunit protein S3
- Chain R
- Ribosomal 40S subunit protein S16A
- Chain U
- Ribosomal 40S subunit protein S19A
- Chain V
- Ribosomal 40S subunit protein S20
- Chain e
- Ribosomal 40S subunit protein S29A
Coloring options: