HL_9G33_015

3D structure

PDB id

9G33 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stalled 90S - Utp23-Krr1-deltaC3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

GGAAUAAGGGUUCGAUU

Length

17 nucleotides

Bulged bases

9G33|1|D3|G|365, 9G33|1|D3|G|371, 9G33|1|D3|G|372

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9G33|1|D3|G|364
9G33|1|D3|G|365
9G33|1|D3|A|366
9G33|1|D3|A|367
9G33|1|D3|U|368
9G33|1|D3|A|369
9G33|1|D3|A|370
9G33|1|D3|G|371
9G33|1|D3|G|372
9G33|1|D3|G|373
9G33|1|D3|U|374
9G33|1|D3|U|375
9G33|1|D3|C|376
9G33|1|D3|G|377
9G33|1|D3|A|378
9G33|1|D3|U|379
9G33|1|D3|U|380

Current chains

Chain D3

18S rRNA

Nearby chains

Chain DE

40S ribosomal protein S4-A

Chain DJ

40S ribosomal protein S9-A

Chain JE

U3 small nucleolar ribonucleoprotein protein LCP5