HL_9G33_016

3D structure

PDB id

9G33 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stalled 90S - Utp23-Krr1-deltaC3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

CUGAGAAACG

Length

10 nucleotides

Bulged bases

9G33|1|D3|A|400, 9G33|1|D3|C|402

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9G33|1|D3|C|394
9G33|1|D3|U|395
9G33|1|D3|G|396
9G33|1|D3|A|397
9G33|1|D3|G|398
9G33|1|D3|A|399
9G33|1|D3|A|400
9G33|1|D3|A|401
9G33|1|D3|C|402
9G33|1|D3|G|403

Current chains

Chain D3

18S rRNA

Nearby chains

Chain DE

40S ribosomal protein S4-A

Chain DG

40S ribosomal protein S6-A

Chain DI

40S ribosomal protein S8-A

Chain JC

Ribosome biogenesis protein ENP2