HL_9G6J_070
3D structure
- PDB id
- 9G6J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- GGAGAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9G6J_070 not in the Motif Atlas
- Homologous match to HL_4V9F_072
- Geometric discrepancy: 0.1087
- The information below is about HL_4V9F_072
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.8
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 352
Unit IDs
9G6J|1|3|G|88
9G6J|1|3|G|89
9G6J|1|3|A|90
9G6J|1|3|G|91
9G6J|1|3|A|92
9G6J|1|3|C|93
Current chains
- Chain 3
- 5S rRNA
Nearby chains
- Chain 0
- 60S ribosomal protein L20
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain r
- Ribosomal 60S subunit protein L10
Coloring options: