9G6J Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_9G6J_001 | 1/1/37:44 | No text annotation | homologous HL_8CRE_001 HL_30068.2 | |
| HL_9G6J_002 | 1/1/68:73 | No text annotation | homologous HL_8CRE_002 HL_53890.2 | |
| HL_9G6J_003 | 1/1/89:95 | No text annotation | homologous HL_8CRE_003 HL_37369.2 | |
| HL_9G6J_004 | 1/1/131:135 | No text annotation | homologous HL_8CRE_004 HL_48778.2 | |
| HL_9G6J_005 | 1/1/193:200 | No text annotation | homologous HL_8P9A_117 HL_01609.3 | |
| HL_9G6J_006 | 1/1/207:211 | No text annotation | geometric HL_5J7L_143 HL_75660.5 | |
| HL_9G6J_007 | 1/1/215:223 | No text annotation | homologous HL_8CRE_007 HL_27670.2 | |
| HL_9G6J_008 | 1/1/278:287 | No text annotation | homologous HL_8CRE_008 HL_77436.5 | |
| HL_9G6J_009 | 1/1/303:312 | No text annotation | homologous HL_8CRE_009 HL_77600.2 | |
| HL_9G6J_010 | 1/1/357:362 | GNRA | homologous HL_8P9A_122 HL_37824.7 | |
| HL_9G6J_011 | 1/1/382:387 | No text annotation | homologous HL_8CRE_011 HL_37824.7 | |
| HL_9G6J_012 | 1/1/539:546 | No text annotation | homologous HL_8CRE_012 HL_27483.1 | |
| HL_9G6J_013 | 1/1/597:602 | No text annotation | geometric HL_5U3G_001 HL_75660.5 | |
| HL_9G6J_014 | 1/1/638:647 | No text annotation | homologous HL_8CRE_013 HL_28252.8 | |
| HL_9G6J_015 | 1/1/684:692 | No text annotation | homologous HL_8CRE_014 HL_41464.2 | |
| HL_9G6J_016 | 1/1/705:710 | No text annotation | homologous HL_8CRE_015 HL_37824.7 | |
| HL_9G6J_017 | 1/1/729:734 | No text annotation | homologous HL_8CRE_016 HL_57875.1 | |
| HL_9G6J_018 | 1/1/759:764 | No text annotation | homologous HL_8CRE_017 HL_86870.2 | |
| HL_9G6J_019 | 1/1/840:845 | No text annotation | homologous HL_8CRE_018 HL_37824.7 | |
| HL_9G6J_020 | 1/1/872:881 | No text annotation | homologous HL_8CRE_019 HL_88205.2 | |
| HL_9G6J_021 | 1/1/906:914 | No text annotation | homologous HL_8P9A_133 HL_87553.1 | |
| HL_9G6J_022 | 1/1/954:959 | No text annotation | homologous HL_8CRE_021 HL_70782.2 | |
| HL_9G6J_023 | 1/1/1072:1079 | No text annotation | homologous HL_8CRE_023 HL_77436.5 | |
| HL_9G6J_024 | 1/1/1122:1128 | GNRA | homologous HL_8P9A_137 HL_37824.7 | |
| HL_9G6J_025 | 1/1/1144:1151 | No text annotation | homologous HL_8CRE_025 HL_42998.2 | |
| HL_9G6J_026 | 1/1/1343:1353 | No text annotation | homologous HL_8CRE_028 HL_25061.1 | |
| HL_9G6J_027 | 1/1/1399:1404 | No text annotation | homologous HL_8CRE_029 HL_37824.7 | |
| HL_9G6J_028 | 1/1/1458:1466 | No text annotation | homologous HL_8CRE_030 HL_28252.8 | |
| HL_9G6J_029 | 1/1/1502:1508 | No text annotation | homologous HL_8CRE_031 HL_57176.2 | |
| HL_9G6J_030 | 1/1/1540:1545 | No text annotation | homologous HL_8CRE_032 HL_37824.7 | |
| HL_9G6J_031 | 1/1/1562:1569 | No text annotation | homologous HL_8CRE_033 HL_28075.1 | |
| HL_9G6J_032 | 1/1/1595:1604 | No text annotation | homologous HL_8P9A_146 HL_81545.2 | |
| HL_9G6J_033 | 1/1/1630:1635 | No text annotation | homologous HL_8CRE_035 HL_37824.7 | |
| HL_9G6J_034 | 1/1/1676:1684 | No text annotation | homologous HL_8CRE_036 HL_77082.1 | |
| HL_9G6J_035 | 1/1/1715:1721 | No text annotation | homologous HL_8P9A_149 HL_25967.2 | |
| HL_9G6J_036 | 1/1/1756:1761 | No text annotation | homologous HL_8CRE_038 HL_75660.5 | |
| HL_9G6J_037 | 1/1/1788:1792 | No text annotation | homologous HL_8CRE_039 HL_48778.2 | |
| HL_9G6J_038 | 1/1/1840:1847 | No text annotation | homologous HL_8P9A_152 HL_89567.2 | |
| HL_9G6J_039 | 1/1/1858:1864 | No text annotation | homologous HL_8CRE_041 HL_37824.7 | |
| HL_9G6J_040 | 1/1/1919:1924 | UNCG | homologous HL_8P9A_154 HL_34617.5 | |
| HL_9G6J_041 | 1/1/2088:2092 | No text annotation | homologous HL_8P9A_156 HL_55195.3 | |
| HL_9G6J_042 | 1/1/2113:2123 | No text annotation | homologous HL_8P9A_157 HL_01962.2 | |
| HL_9G6J_043 | 1/1/2142:2148 | GNRA | homologous HL_8P9A_158 HL_37824.7 | |
| HL_9G6J_044 | 1/1/2198:2203 | No text annotation | homologous HL_8CRE_046 HL_37824.7 | |
| HL_9G6J_045 | 1/1/2231:2241 | No text annotation | homologous HL_8CRE_047 HL_25847.2 | |
| HL_9G6J_046 | 1/1/2270:2278 | No text annotation | homologous HL_8CRE_048 HL_20167.2 | |
| HL_9G6J_047 | 1/1/2347:2356 | No text annotation | homologous HL_8CRE_049 HL_61996.2 | |
| HL_9G6J_048 | 1/1/2514:2521 | No text annotation | homologous HL_8CRE_051 HL_00914.1 | |
| HL_9G6J_049 | 1/1/2543:2547 | No text annotation | homologous HL_8CRE_052 HL_75660.5 | |
| HL_9G6J_050 | 1/1/2588:2596 | No text annotation | homologous HL_8P9A_165 HL_85367.2 | |
| HL_9G6J_051 | 1/1/2605:2617 | No text annotation | homologous HL_8P9A_166 HL_91939.2 | |
| HL_9G6J_052 | 1/1/2645:2653 | No text annotation | homologous HL_8CRE_055 HL_50860.2 | |
| HL_9G6J_053 | 1/1/2665:2672 | No text annotation | homologous HL_8CRE_056 HL_93324.4 | |
| HL_9G6J_054 | 1/1/2696:2704 | No text annotation | homologous HL_8CRE_057 HL_80599.2 | |
| HL_9G6J_055 | 1/1/2716:2721 | No text annotation | homologous HL_8CRE_058 HL_37824.7 | |
| HL_9G6J_056 | 1/1/2748:2756 | No text annotation | homologous HL_8CRE_059 HL_93324.4 | |
| HL_9G6J_057 | 1/1/2812:2820 | No text annotation | homologous HL_8CRE_060 HL_32735.2 | |
| HL_9G6J_058 | 1/1/2869:2876 | No text annotation | homologous HL_8P9A_173 HL_31585.4 | |
| HL_9G6J_059 | 1/1/2892:2898 | No text annotation | homologous HL_8P9A_174 HL_30068.2 | |
| HL_9G6J_060 | 1/1/2935:2940 | No text annotation | homologous HL_8CRE_063 HL_37824.7 | |
| HL_9G6J_061 | 1/1/2997:3002 | No text annotation | homologous HL_8CRE_064 HL_37824.7 | |
| HL_9G6J_062 | 1/1/3040:3045 | No text annotation | homologous HL_8CRE_065 HL_65794.5 | |
| HL_9G6J_063 | 1/1/3082:3096 | No text annotation | homologous HL_8CRE_066 HL_74055.2 | |
| HL_9G6J_064 | 1/1/3161:3166 | No text annotation | ||
| HL_9G6J_065 | 1/1/3205:3212 | No text annotation | homologous HL_8CRE_068 HL_07886.3 | |
| HL_9G6J_066 | 1/1/3268:3276 | No text annotation | homologous HL_8CRE_069 HL_64690.6 | |
| HL_9G6J_067 | 1/1/3315:3318 | Mini UNCG | homologous HL_8P9A_182 HL_48778.2 | |
| HL_9G6J_068 | 1/3/32:45 | No text annotation | geometric HL_8OI5_068 HL_13971.1 | |
| HL_9G6J_069 | 1/3/36:41 | No text annotation | homologous HL_8P9A_184 HL_47787.2 | |
| HL_9G6J_070 | 1/3/88:93 | GNRA | homologous HL_4V9F_072 HL_37824.7 | |
| HL_9G6J_071 | 1/4/47:56 | No text annotation | homologous HL_8P9A_186 HL_93438.2 | |
| HL_9G6J_072 | 1/4/68:90 | No text annotation | ||
| HL_9G6J_073 | 1/4/108:114 | No text annotation | homologous HL_8CRE_076 HL_53890.2 | |
| HL_9G6J_074 | 1/4/124:129 | No text annotation | homologous HL_8CRE_077 HL_86883.1 | |
| HL_9G6J_075 | 1/A/7:17 | No text annotation | homologous HL_8CRE_191 HL_89881.5 | |
| HL_9G6J_076 | 1/A/70:81 | No text annotation | homologous HL_8CRE_192 HL_81312.1 | |
| HL_9G6J_077 | 1/A/152:158 | No text annotation | homologous HL_8CRE_193 HL_37824.7 | |
| HL_9G6J_078 | 1/A/188:193 | No text annotation | homologous HL_8CRE_194 HL_78347.4 | |
| HL_9G6J_079 | 1/A/241:248 | No text annotation | homologous HL_8CRE_196 HL_77436.5 | |
| HL_9G6J_080 | 1/A/274:277 | Mini UNCG | homologous HL_8P9A_196 HL_48778.2 | |
| HL_9G6J_081 | 1/A/328:336 | No text annotation | homologous HL_8CRE_198 HL_84299.4 | |
| HL_9G6J_082 | 1/A/366:371 | No text annotation | homologous HL_8CRE_199 HL_37824.7 | |
| HL_9G6J_083 | 1/A/391:402 | No text annotation | homologous HL_8CRE_200 HL_06226.4 | |
| HL_9G6J_084 | 1/A/412:417 | No text annotation | homologous HL_8CRE_201 HL_34617.5 | |
| HL_9G6J_085 | 1/A/448:454 | No text annotation | homologous HL_8CRE_202 HL_48417.5 | |
| HL_9G6J_086 | 1/A/518:530 | No text annotation | homologous HL_8CRE_204 HL_05304.3 | |
| HL_9G6J_087 | 1/A/567:572 | No text annotation | homologous HL_8CRE_205 HL_93535.1 | |
| HL_9G6J_088 | 1/A/748:758 | No text annotation | ||
| HL_9G6J_089 | 1/A/762:767 | No text annotation | homologous HL_8CRE_208 HL_65313.1 | |
| HL_9G6J_090 | 1/A/813:829 | No text annotation | ||
| HL_9G6J_091 | 1/A/885:894 | No text annotation | homologous HL_8CRE_210 HL_75293.5 | |
| HL_9G6J_092 | 1/A/922:927 | No text annotation | homologous HL_8CRE_211 HL_37824.7 | |
| HL_9G6J_093 | 1/A/982:992 | No text annotation | homologous HL_8CRE_212 HL_75293.5 | |
| HL_9G6J_094 | 1/A/1040:1049 | No text annotation | homologous HL_8CRE_213 HL_69139.1 | |
| HL_9G6J_095 | 1/A/1069:1074 | No text annotation | homologous HL_8CRE_214 HL_37824.7 | |
| HL_9G6J_096 | 1/A/1106:1111 | No text annotation | homologous HL_8CRE_215 HL_37824.7 | |
| HL_9G6J_097 | 1/A/1173:1182 | No text annotation | homologous HL_8P9A_215 HL_50779.4 | |
| HL_9G6J_098 | 1/A/1223:1232 | No text annotation | homologous HL_8CRE_217 HL_81538.2 | |
| HL_9G6J_099 | 1/A/1281:1286 | No text annotation | homologous HL_8CRE_218 HL_37824.7 | |
| HL_9G6J_100 | 1/A/1294:1301 | No text annotation | homologous HL_8CRE_219 HL_77436.5 | |
| HL_9G6J_101 | 1/A/1344:1349 | No text annotation | homologous HL_8CRE_220 HL_48417.5 | |
| HL_9G6J_102 | 1/A/1382:1388 | No text annotation | homologous HL_8CRE_221 HL_37369.2 | |
| HL_9G6J_103 | 1/A/1488:1493 | No text annotation | homologous HL_8CRE_222 HL_37824.7 | |
| HL_9G6J_104 | 1/A/1537:1548 | No text annotation | homologous HL_8CRE_223 HL_67079.1 | |
| HL_9G6J_105 | 1/A/1581:1589 | No text annotation | homologous HL_8CRE_224 HL_01609.3 | |
| HL_9G6J_106 | 1/A/1765:1770 | No text annotation | homologous HL_8CRE_225 HL_37824.7 | |
| HL_9G6J_107 | 1/AT/13:23 | tRNA D-loop | homologous HL_5B63_003 HL_20811.4 | |
| HL_9G6J_108 | 1/AT/32:40 | tRNA anticodon loop | homologous HL_6GSK_203 HL_06059.6 | |
| HL_9G6J_109 | 1/AT/54:62 | T-loop with 2 stacked bulged bases | homologous HL_4RDX_003 HL_28252.8 | |
| HL_9G6J_110 | 1/PT/13:23 | tRNA D-loop | homologous HL_5B63_003 HL_20811.4 | |
| HL_9G6J_111 | 1/PT/32:40 | No text annotation | homologous HL_9DFC_104 HL_06059.6 | |
| HL_9G6J_112 | 1/PT/54:62 | T-loop with 2 stacked bulged bases | homologous HL_5AH5_008 HL_28252.8 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_9G6J_002 | 1/1/6:7, 1/4/150:152 | No text annotation | homologous IL_8CRE_002 IL_61258.15 | |
| IL_9G6J_003 | 1/1/12:14, 1/4/144:145 | No text annotation | homologous IL_8CRE_003 IL_89505.4 | |
| IL_9G6J_004 | 1/1/26:27, 1/1/55:57 | No text annotation | homologous IL_8CRE_004 IL_90729.1 | |
| IL_9G6J_005 | 1/1/30:37, 1/1/44:52 | tSH-tHW-tHH-tHS | homologous IL_8CRE_005 IL_84694.2 | |
| IL_9G6J_006 | 1/1/81:88, 1/1/96:102 | 8x7 Sarcin-Ricin; G-bulge | homologous IL_8CRE_006 IL_65594.1 | |
| IL_9G6J_007 | 1/1/122:123, 1/1/143:148 | No text annotation | homologous IL_8CRE_007 IL_92634.2 | |
| IL_9G6J_008 | 1/1/124:126, 1/1/140:142 | Isolated non-canonical cWW pair | homologous IL_8CRE_008 IL_87907.2 | |
| IL_9G6J_009 | 1/1/161:163, 1/1/257:259 | Isolated non-canonical cWW pair | geometric IL_3TD0_006 IL_28037.2 | |
| IL_9G6J_010 | 1/1/163:165, 1/1/256:257 | No text annotation | ||
| IL_9G6J_011 | 1/1/168:169, 1/1/248:253 | No text annotation | homologous IL_8CRE_010 IL_70376.1 | |
| IL_9G6J_012 | 1/1/176:177, 1/1/238:241 | No text annotation | homologous IL_8CRE_011 IL_76709.2 | |
| IL_9G6J_013 | 1/1/177:178, 1/1/236:238 | No text annotation | homologous IL_8CRE_012 IL_90729.1 | |
| IL_9G6J_014 | 1/1/188:190, 1/1/203:204 | No text annotation | homologous IL_8CRE_013 IL_89505.4 | |
| IL_9G6J_015 | 1/1/337:339, 1/4/25:26 | Single bulged A | homologous IL_8P9A_242 IL_31462.6 | |
| IL_9G6J_016 | 1/1/376:379, 1/1/390:403 | No text annotation | geometric IL_8CRE_015 IL_81516.2 | |
| IL_9G6J_017 | 1/1/404:410, 1/4/13:19 | No text annotation | homologous IL_8P9A_244 IL_04021.2 | |
| IL_9G6J_018 | 1/1/439:442, 1/1/487:488 | No text annotation | homologous IL_8CRE_017 IL_51454.3 | |
| IL_9G6J_019 | 1/1/505:507, 1/1/578:579 | Single bulged A | homologous IL_8CRE_019 IL_31462.6 | |
| IL_9G6J_020 | 1/1/508:509, 1/1/575:577 | Single bulged A | homologous IL_8CRE_020 IL_31462.6 | |
| IL_9G6J_021 | 1/1/513:522, 1/1/564:571 | No text annotation | homologous IL_8CRE_021 IL_85879.1 | |
| IL_9G6J_022 | 1/1/527:534, 1/1/551:559 | No text annotation | homologous IL_8CRE_022 IL_43858.1 | |
| IL_9G6J_023 | 1/1/666:668, 1/1/788:790 | Isolated non-canonical cWW pair | homologous IL_8CRE_023 IL_87907.2 | |
| IL_9G6J_024 | 1/1/678:682, 1/1/694:698 | No text annotation | homologous IL_8CRE_024 IL_74367.1 | |
| IL_9G6J_025 | 1/1/723:726, 1/1/737:741 | No text annotation | homologous IL_8P9A_251 IL_23774.1 | |
| IL_9G6J_026 | 1/1/748:749, 1/1/775:777 | Single bulged A | homologous IL_8P9A_252 IL_31462.6 | |
| IL_9G6J_027 | 1/1/751:752, 1/1/771:773 | No text annotation | homologous IL_8CRE_027 IL_89505.4 | |
| IL_9G6J_028 | 1/1/754:759, 1/1/764:769 | No text annotation | homologous IL_8CRE_028 IL_85536.2 | |
| IL_9G6J_029 | 1/1/799:801, 1/1/934:936 | Isolated non-canonical cWW pair | homologous IL_8P9A_255 IL_87907.2 | |
| IL_9G6J_030 | 1/1/801:805, 1/1/927:934 | No text annotation | homologous IL_8P9A_256 IL_54041.2 | |
| IL_9G6J_031 | 1/1/824:825, 1/1/891:893 | Single bulged A | homologous IL_8CRE_031 IL_31462.6 | |
| IL_9G6J_032 | 1/1/829:830, 1/1/855:857 | No text annotation | homologous IL_8CRE_032 IL_00225.13 | |
| IL_9G6J_033 | 1/1/830:834, 1/1/851:855 | Triple sheared | homologous IL_8CRE_033 IL_50730.2 | |
| IL_9G6J_034 | 1/1/865:868, 1/1/884:886 | No text annotation | homologous IL_8CRE_034 IL_51387.2 | |
| IL_9G6J_035 | 1/1/869:871, 1/1/882:883 | Single bulged U | homologous IL_8P9A_260 IL_89505.4 | |
| IL_9G6J_036 | 1/1/903:905, 1/1/915:919 | No text annotation | homologous IL_8CRE_036 IL_06549.2 | |
| IL_9G6J_037 | 1/1/950:952, 1/1/961:963 | Isolated non-canonical cWW pair | homologous IL_8P9A_262 IL_28037.2 | |
| IL_9G6J_038 | 1/1/965:966, 1/1/1107:1109 | Single stack bend | homologous IL_8P9A_263 IL_26793.1 | |
| IL_9G6J_039 | 1/1/973:978, 1/1/1097:1100 | No text annotation | homologous IL_8CRE_039 IL_34737.1 | |
| IL_9G6J_040 | 1/1/979:981, 1/1/1095:1096 | No text annotation | homologous IL_8CRE_040 IL_00225.13 | |
| IL_9G6J_041 | 1/1/987:993, 1/1/1048:1054 | 7x7 Sarcin-Ricin with intercalated A; G-bulge | homologous IL_8P9A_266 IL_29198.2 | |
| IL_9G6J_042 | 1/1/993:994, 1/1/1046:1048 | Minor groove platform | homologous IL_8P9A_267 IL_51454.3 | |
| IL_9G6J_043 | 1/1/995:1000, 1/1/1042:1045 | No text annotation | homologous IL_8P9A_268 IL_26222.2 | |
| IL_9G6J_044 | 1/1/1002:1005, 1/1/1037:1040 | No text annotation | homologous IL_8CRE_044 IL_77658.1 | |
| IL_9G6J_045 | 1/1/1005:1007, 1/1/1035:1037 | Isolated non-canonical cWW pair | homologous IL_8CRE_045 IL_87907.2 | |
| IL_9G6J_046 | 1/1/1010:1013, 1/1/1031:1032 | Multiple bulged bases | geometric IL_4YAZ_008 IL_82107.4 | |
| IL_9G6J_047 | 1/1/1065:1067, 1/1/1083:1085 | Isolated non-canonical cWW pair | homologous IL_8CRE_047 IL_87907.2 | |
| IL_9G6J_048 | 1/1/1070:1072, 1/1/1079:1080 | No text annotation | homologous IL_8CRE_048 IL_00225.13 | |
| IL_9G6J_049 | 1/1/1116:1118, 1/1/1132:1134 | Isolated non-canonical cWW pair | homologous IL_8P9A_274 IL_87907.2 | |
| IL_9G6J_051 | 1/1/1163:1167, 1/1/1324:1328 | UAA/GAN | homologous IL_8CRE_051 IL_38507.2 | |
| IL_9G6J_052 | 1/1/1169:1176, 1/1/1321:1322 | SSU/LSU pseudoknot | homologous IL_8CRE_052 IL_41203.4 | |
| IL_9G6J_053 | 1/1/1176:1178, 1/1/1320:1321 | No text annotation | homologous IL_8CRE_053 IL_89505.4 | |
| IL_9G6J_054 | 1/1/1183:1190, 1/1/1310:1315 | No text annotation | homologous IL_8CRE_054 IL_77278.1 | |
| IL_9G6J_055 | 1/1/1190:1201, 1/1/1295:1310 | No text annotation | homologous IL_8CRE_055 IL_83149.1 | |
| IL_9G6J_056 | 1/1/1203:1205, 1/1/1292:1293 | Single bulged U | homologous IL_8P9A_281 IL_89505.4 | |
| IL_9G6J_057 | 1/1/1339:1342, 1/1/1354:1357 | No text annotation | homologous IL_8CRE_060 IL_77658.1 | |
| IL_9G6J_058 | 1/1/1372:1374, 1/1/1424:1427 | No text annotation | homologous IL_8P9A_285 IL_42997.3 | |
| IL_9G6J_059 | 1/1/1381:1383, 1/1/1416:1417 | Single bulged A | homologous IL_8CRE_062 IL_31462.6 | |
| IL_9G6J_060 | 1/1/1384:1391, 1/1/1411:1415 | Kink-turn | homologous IL_8P9A_287 IL_70923.9 | |
| IL_9G6J_061 | 1/1/1394:1397, 1/1/1406:1408 | No text annotation | homologous IL_8CRE_064 IL_07785.1 | |
| IL_9G6J_062 | 1/1/1440:1446, 1/1/2332:2337 | 7x6 Sarcin-Ricin; G-bulge | homologous IL_8P9A_289 IL_26307.2 | |
| IL_9G6J_063 | 1/1/1496:1501, 1/1/1509:1512 | No text annotation | ||
| IL_9G6J_064 | 1/1/1528:1532, 1/1/1581:1586 | UAA/GAN | homologous IL_8CRE_067 IL_38507.2 | |
| IL_9G6J_065 | 1/1/1556:1558, 1/1/1573:1574 | No text annotation | homologous IL_8CRE_068 IL_89505.4 | |
| IL_9G6J_066 | 1/1/1614:1617, 1/1/1820:1822 | No text annotation | homologous IL_8CRE_069 IL_15698.3 | |
| IL_9G6J_067 | 1/1/1619:1620, 1/1/1815:1818 | No text annotation | homologous IL_8CRE_070 IL_82107.4 | |
| IL_9G6J_068 | 1/1/1622:1627, 1/1/1807:1813 | No text annotation | ||
| IL_9G6J_069 | 1/1/1641:1645, 1/1/1802:1806 | Triple sheared | homologous IL_8CRE_072 IL_50730.2 | |
| IL_9G6J_070 | 1/1/1657:1659, 1/1/1782:1784 | Isolated non-canonical cWW pair | homologous IL_8CRE_073 IL_87907.2 | |
| IL_9G6J_071 | 1/1/1665:1666, 1/1/1774:1776 | No text annotation | homologous IL_8CRE_074 IL_61258.15 | |
| IL_9G6J_072 | 1/1/1666:1667, 1/1/1772:1774 | Single stack bend | homologous IL_8P9A_298 IL_90729.1 | |
| IL_9G6J_073 | 1/1/1690:1694, 1/1/1743:1748 | No text annotation | homologous IL_8CRE_076 IL_00981.1 | |
| IL_9G6J_074 | 1/1/1698:1703, 1/1/1733:1739 | No text annotation | homologous IL_8CRE_077 IL_23038.1 | |
| IL_9G6J_075 | 1/1/1707:1713, 1/1/1723:1729 | No text annotation | homologous IL_8CRE_078 IL_69543.3 | |
| IL_9G6J_076 | 1/1/1879:1885, 1/1/2324:2327 | No text annotation | homologous IL_8CRE_079 IL_22829.2 | |
| IL_9G6J_077 | 1/1/1891:1893, 1/1/2316:2318 | No text annotation | homologous IL_8CRE_080 IL_67095.2 | |
| IL_9G6J_078 | 1/1/1894:1897, 1/1/2314:2315 | Major groove platform; stack outside cWW | geometric IL_8P9A_304 IL_50694.7 | |
| IL_9G6J_079 | 1/1/1894:1902, 1/1/2311:2315 | No text annotation | geometric IL_8P9A_305 IL_22854.4 | |
| IL_9G6J_080 | 1/1/1897:1902, 1/1/2311:2314 | No text annotation | homologous IL_8CRE_083 IL_76758.2 | |
| IL_9G6J_081 | 1/1/1914:1919, 1/1/1924:1930 | No text annotation | homologous IL_8CRE_084 IL_47346.2 | |
| IL_9G6J_082 | 1/1/1936:1938, 1/1/2084:2086 | Isolated non-canonical cWW pair | homologous IL_8CRE_085 IL_87907.2 | |
| IL_9G6J_083 | 1/1/1943:1944, 1/1/2076:2079 | No text annotation | homologous IL_8CRE_086 IL_73355.1 | |
| IL_9G6J_084 | 1/1/2106:2107, 1/1/2301:2303 | Single bulged A | homologous IL_8CRE_087 IL_31462.6 | |
| IL_9G6J_085 | 1/1/2134:2139, 1/1/2151:2158 | No text annotation | homologous IL_8CRE_088 IL_20047.1 | |
| IL_9G6J_086 | 1/1/2174:2177, 1/1/2223:2224 | Minor groove platform, major groove intercalation | homologous IL_8CRE_089 IL_95583.2 | |
| IL_9G6J_087 | 1/1/2178:2179, 1/1/2219:2222 | No text annotation | homologous IL_8CRE_090 IL_82107.4 | |
| IL_9G6J_088 | 1/1/2182:2184, 1/1/2215:2216 | No text annotation | homologous IL_8CRE_091 IL_26793.1 | |
| IL_9G6J_089 | 1/1/2184:2188, 1/1/2213:2215 | No text annotation | homologous IL_8CRE_092 IL_90351.1 | |
| IL_9G6J_090 | 1/1/2189:2195, 1/1/2206:2212 | No text annotation | homologous IL_8P9A_316 IL_88116.2 | |
| IL_9G6J_091 | 1/1/2254:2255, 1/1/2285:2288 | No text annotation | geometric IL_8CRE_094 IL_22551.4 | |
| IL_9G6J_092 | 1/1/2255:2266, 1/1/2282:2285 | No text annotation | homologous IL_8CRE_095 IL_42218.2 | |
| IL_9G6J_093 | 1/1/2369:2372, 1/1/2958:2960 | No text annotation | homologous IL_8CRE_096 IL_55516.2 | |
| IL_9G6J_094 | 1/1/2374:2376, 1/1/2953:2956 | No text annotation | homologous IL_8CRE_097 IL_83389.2 | |
| IL_9G6J_095 | 1/1/2387:2389, 1/1/2783:2784 | No text annotation | homologous IL_8CRE_098 IL_89505.4 | |
| IL_9G6J_096 | 1/1/2390:2391, 1/1/2779:2782 | No text annotation | homologous IL_8CRE_099 IL_51454.3 | |
| IL_9G6J_097 | 1/1/2401:2403, 1/1/2576:2579 | No text annotation | homologous IL_8CRE_100 IL_85599.2 | |
| IL_9G6J_098 | 1/1/2498:2504, 1/1/2556:2559 | No text annotation | homologous IL_8CRE_106 IL_00555.1 | |
| IL_9G6J_099 | 1/1/2586:2587, 1/1/2597:2599 | No text annotation | homologous IL_8CRE_107 IL_33761.2 | |
| IL_9G6J_100 | 1/1/2638:2640, 1/1/2658:2662 | No text annotation | homologous IL_8P9A_326 IL_61476.2 | |
| IL_9G6J_101 | 1/1/2690:2693, 1/1/2707:2710 | No text annotation | homologous IL_8P9A_327 IL_85033.2 | |
| IL_9G6J_102 | 1/1/2742:2745, 1/1/2759:2760 | No text annotation | homologous IL_8CRE_110 IL_79895.1 | |
| IL_9G6J_103 | 1/1/2795:2798, 1/1/2835:2839 | No text annotation | homologous IL_8CRE_111 IL_68909.1 | |
| IL_9G6J_104 | 1/1/2798:2800, 1/1/2834:2835 | No text annotation | homologous IL_8P9A_331 IL_07039.3 | |
| IL_9G6J_105 | 1/1/2800:2802, 1/1/2830:2834 | No text annotation | homologous IL_8CRE_113 IL_51387.2 | |
| IL_9G6J_106 | 1/1/2807:2811, 1/1/2821:2825 | No text annotation | homologous IL_8P9A_333 IL_17948.2 | |
| IL_9G6J_107 | 1/1/2848:2849, 1/1/2921:2923 | No text annotation | homologous IL_8CRE_115 IL_07039.3 | |
| IL_9G6J_108 | 1/1/2851:2853, 1/1/2915:2919 | No text annotation | homologous IL_8CRE_116 IL_07785.1 | |
| IL_9G6J_109 | 1/1/2853:2854, 1/1/2912:2915 | No text annotation | homologous IL_8CRE_117 IL_42626.2 | |
| IL_9G6J_110 | 1/1/2861:2863, 1/1/2884:2886 | Isolated non-canonical cWW pair | geometric IL_8P9A_337 IL_87907.2 | |
| IL_9G6J_111 | 1/1/2861:2864, 1/1/2881:2886 | No text annotation | geometric IL_8P9A_338 IL_07469.2 | |
| IL_9G6J_112 | 1/1/2863:2864, 1/1/2881:2884 | No text annotation | homologous IL_8P9A_339 IL_02555.1 | |
| IL_9G6J_113 | 1/1/2890:2892, 1/1/2898:2900 | Isolated non-canonical cWW pair | homologous IL_8P9A_340 IL_87907.2 | |
| IL_9G6J_114 | 1/1/2932:2933, 1/1/2942:2944 | Single bulged A | geometric IL_8P9A_288 IL_31462.6 | |
| IL_9G6J_115 | 1/1/2976:2979, 1/1/3111:3116 | Double sheared | homologous IL_8P9A_342 IL_09705.15 | |
| IL_9G6J_116 | 1/1/2984:2986, 1/1/3012:3014 | Isolated non-canonical cWW pair | homologous IL_8CRE_124 IL_28037.2 | |
| IL_9G6J_117 | 1/1/2990:2997, 1/1/3002:3008 | 8x7 Sarcin-Ricin; G-bulge | homologous IL_8CRE_125 IL_04346.10 | |
| IL_9G6J_118 | 1/1/3019:3023, 1/1/3063:3066 | No text annotation | homologous IL_8CRE_126 IL_83150.2 | |
| IL_9G6J_119 | 1/1/3026:3031, 1/1/3056:3060 | No text annotation | homologous IL_8CRE_127 IL_21001.1 | |
| IL_9G6J_120 | 1/1/3035:3036, 1/1/3049:3052 | No text annotation | homologous IL_8CRE_128 IL_42626.2 | |
| IL_9G6J_121 | 1/1/3075:3079, 1/1/3099:3103 | UAA/GAN | homologous IL_8P9A_348 IL_38507.2 | |
| IL_9G6J_122 | 1/1/3134:3136, 1/1/3249:3251 | Isolated non-canonical cWW pair | homologous IL_8CRE_130 IL_87907.2 | |
| IL_9G6J_123 | 1/1/3138:3141, 1/1/3244:3247 | Tandem non-canonical cWW pairs | geometric IL_1JID_002 IL_85033.2 | |
| IL_9G6J_124 | 1/1/3147:3149, 1/1/3175:3176 | Single bulged A | homologous IL_8CRE_131 IL_31462.6 | |
| IL_9G6J_125 | 1/1/3149:3158, 1/1/3169:3175 | No text annotation | homologous IL_8CRE_132 IL_42231.1 | |
| IL_9G6J_126 | 1/1/3190:3194, 1/1/3223:3225 | No text annotation | homologous IL_8CRE_133 IL_82741.2 | |
| IL_9G6J_127 | 1/1/3200:3203, 1/1/3214:3217 | No text annotation | homologous IL_8CRE_134 IL_77658.1 | |
| IL_9G6J_128 | 1/1/3265:3268, 1/1/3276:3279 | No text annotation | homologous IL_8CRE_135 IL_77658.1 | |
| IL_9G6J_129 | 1/1/3283:3285, 1/1/3352:3353 | No text annotation | homologous IL_8CRE_136 IL_89505.4 | |
| IL_9G6J_130 | 1/1/3289:3290, 1/1/3346:3348 | Single bulged U | homologous IL_8P9A_358 IL_89505.4 | |
| IL_9G6J_131 | 1/1/3293:3295, 1/1/3338:3343 | No text annotation | homologous IL_8CRE_138 IL_43622.1 | |
| IL_9G6J_132 | 1/1/3297:3302, 1/1/3332:3336 | No text annotation | homologous IL_8CRE_139 IL_70411.2 | |
| IL_9G6J_133 | 1/1/3305:3307, 1/1/3328:3329 | Single bulged U | homologous IL_8P9A_361 IL_89505.4 | |
| IL_9G6J_134 | 1/1/3307:3310, 1/1/3325:3328 | Double sheared | homologous IL_8CRE_141 IL_09705.15 | |
| IL_9G6J_135 | 1/1/3314:3315, 1/1/3318:3321 | No text annotation | homologous IL_8CRE_142 IL_84476.1 | |
| IL_9G6J_136 | 1/3/15:16, 1/3/63:65 | Single bulged A | homologous IL_8P9A_364 IL_31462.6 | |
| IL_9G6J_137 | 1/3/21:27, 1/3/53:58 | No text annotation | homologous IL_8OI5_135 IL_18487.1 | |
| IL_9G6J_138 | 1/3/28:29, 1/3/49:52 | No text annotation | homologous IL_8OI5_136 IL_15052.4 | |
| IL_9G6J_139 | 1/3/29:30, 1/3/47:49 | No text annotation | homologous IL_8OI5_137 IL_90729.1 | |
| IL_9G6J_140 | 1/3/32:36, 1/3/41:45 | No text annotation | homologous IL_8OI5_138 IL_58103.11 | |
| IL_9G6J_141 | 1/3/72:80, 1/3/100:106 | 8x7 Sarcin-Ricin; G-bulge | homologous IL_8OI5_139 IL_04346.10 | |
| IL_9G6J_142 | 1/3/84:87, 1/3/94:96 | Isolated non-canonical cWW pair | homologous IL_8OI5_140 IL_87907.2 | |
| IL_9G6J_143 | 1/4/64:66, 1/4/93:96 | No text annotation | homologous IL_8P9A_371 IL_07785.1 | |
| IL_9G6J_144 | 1/4/67:68, 1/4/90:92 | No text annotation | homologous IL_8CRE_151 IL_61258.15 | |
| IL_9G6J_145 | 1/A/24:26, 1/A/598:599 | No text annotation | homologous IL_8CRE_390 IL_61258.15 | |
| IL_9G6J_146 | 1/A/35:37, 1/A/469:471 | Isolated non-canonical cWW pair | homologous IL_8CRE_391 IL_87907.2 | |
| IL_9G6J_147 | 1/A/37:41, 1/A/464:469 | No text annotation | homologous IL_8CRE_392 IL_12697.1 | |
| IL_9G6J_148 | 1/A/42:48, 1/A/429:431 | No text annotation | geometric IL_8P9A_376 IL_88082.1 | |
| IL_9G6J_149 | 1/A/50:52, 1/A/426:427 | Minor groove platform | homologous IL_8P9A_377 IL_51454.3 | |
| IL_9G6J_150 | 1/A/58:63, 1/A/87:89 | No text annotation | homologous IL_8CRE_395 IL_61299.4 | |
| IL_9G6J_151 | 1/A/64:69, 1/A/82:86 | No text annotation | homologous IL_8CRE_396 IL_21667.1 | |
| IL_9G6J_152 | 1/A/109:112, 1/A/300:303 | No text annotation | homologous IL_8P9A_380 IL_77658.1 | |
| IL_9G6J_153 | 1/A/113:116, 1/A/298:299 | Multiple bulged bases | homologous IL_8P9A_381 IL_82107.4 | |
| IL_9G6J_154 | 1/A/117:122, 1/A/293:297 | No text annotation | homologous IL_8CRE_399 IL_29223.1 | |
| IL_9G6J_155 | 1/A/141:147, 1/A/163:170 | No text annotation | homologous IL_8CRE_400 IL_80604.6 | |
| IL_9G6J_156 | 1/A/147:150, 1/A/160:163 | No text annotation | homologous IL_8CRE_401 IL_51479.1 | |
| IL_9G6J_157 | 1/A/184:187, 1/A/194:197 | Double sheared | homologous IL_8CRE_402 IL_09705.15 | |
| IL_9G6J_158 | 1/A/202:204, 1/A/257:261 | No text annotation | homologous IL_8CRE_403 IL_51387.2 | |
| IL_9G6J_159 | 1/A/204:206, 1/A/255:257 | Isolated non-canonical cWW pair | homologous IL_8CRE_404 IL_28037.2 | |
| IL_9G6J_160 | 1/A/263:266, 1/A/285:287 | No text annotation | homologous IL_8CRE_405 IL_10167.6 | |
| IL_9G6J_161 | 1/A/268:271, 1/A/281:283 | No text annotation | homologous IL_8CRE_406 IL_15698.3 | |
| IL_9G6J_162 | 1/A/273:274, 1/A/277:279 | No text annotation | homologous IL_8CRE_407 IL_89505.4 | |
| IL_9G6J_163 | 1/A/309:314, 1/A/346:353 | Kink-turn with non-sequential stacking | homologous IL_8CRE_408 IL_46174.3 | |
| IL_9G6J_164 | 1/A/316:321, 1/A/343:344 | No text annotation | homologous IL_8CRE_409 IL_99380.1 | |
| IL_9G6J_165 | 1/A/361:363, 1/A/374:379 | No text annotation | homologous IL_8CRE_410 IL_73789.1 | |
| IL_9G6J_166 | 1/A/387:389, 1/A/404:406 | Isolated cWH basepair | homologous IL_8P9A_394 IL_10167.6 | |
| IL_9G6J_167 | 1/A/409:411, 1/A/418:420 | No text annotation | homologous IL_8CRE_412 IL_42997.3 | |
| IL_9G6J_168 | 1/A/437:439, 1/A/461:462 | Single bulged U | homologous IL_8P9A_396 IL_89505.4 | |
| IL_9G6J_169 | 1/A/441:445, 1/A/458:459 | No text annotation | homologous IL_8CRE_414 IL_03109.3 | |
| IL_9G6J_170 | 1/A/445:446, 1/A/456:458 | Single bulged G | homologous IL_8P9A_398 IL_00225.13 | |
| IL_9G6J_171 | 1/A/515:516, 1/A/531:533 | No text annotation | homologous IL_8CRE_419 IL_51454.3 | |
| IL_9G6J_172 | 1/A/516:518, 1/A/530:531 | Minor groove platform | homologous IL_8P9A_401 IL_51454.3 | |
| IL_9G6J_173 | 1/A/548:555, 1/A/585:586 | SSU/LSU pseudoknot | homologous IL_8P9A_402 IL_41203.4 | |
| IL_9G6J_174 | 1/A/555:557, 1/A/584:585 | Single bulged U | homologous IL_8P9A_403 IL_89505.4 | |
| IL_9G6J_175 | 1/A/560:566, 1/A/573:581 | No text annotation | homologous IL_8CRE_423 IL_54177.4 | |
| IL_9G6J_176 | 1/A/614:620, 1/A/1089:1090 | No text annotation | homologous IL_8CRE_424 IL_38186.6 | |
| IL_9G6J_177 | 1/A/622:624, 1/A/958:960 | Isolated non-canonical cWW pair | homologous IL_8CRE_425 IL_87907.2 | |
| IL_9G6J_178 | 1/A/625:629, 1/A/953:957 | No text annotation | homologous IL_8CRE_426 IL_17136.7 | |
| IL_9G6J_179 | 1/A/731:732, 1/A/786:789 | No text annotation | homologous IL_8CRE_428 IL_68140.4 | |
| IL_9G6J_180 | 1/A/733:735, 1/A/783:785 | Isolated non-canonical cWW pair | homologous IL_8P9A_413 IL_28037.2 | |
| IL_9G6J_181 | 1/A/736:738, 1/A/778:782 | No text annotation | ||
| IL_9G6J_182 | 1/A/738:744, 1/A/775:778 | No text annotation | ||
| IL_9G6J_183 | 1/A/803:806, 1/A/836:837 | No text annotation | homologous IL_8CRE_431 IL_22551.4 | |
| IL_9G6J_184 | 1/A/853:855, 1/A/942:945 | No text annotation | homologous IL_8CRE_432 IL_10167.6 | |
| IL_9G6J_185 | 1/A/856:859, 1/A/938:941 | No text annotation | homologous IL_8CRE_433 IL_85033.2 | |
| IL_9G6J_186 | 1/A/859:863, 1/A/935:938 | No text annotation | homologous IL_8CRE_434 IL_85033.2 | |
| IL_9G6J_187 | 1/A/870:873, 1/A/909:912 | No text annotation | homologous IL_8P9A_421 IL_85033.2 | |
| IL_9G6J_188 | 1/A/878:884, 1/A/895:904 | No text annotation | homologous IL_8CRE_436 IL_89047.1 | |
| IL_9G6J_189 | 1/A/970:975, 1/A/999:1001 | No text annotation | homologous IL_8P9A_423 IL_97273.1 | |
| IL_9G6J_190 | 1/A/975:979, 1/A/995:999 | No text annotation | homologous IL_8CRE_438 IL_17136.7 | |
| IL_9G6J_191 | 1/A/1019:1021, 1/A/1080:1086 | No text annotation | homologous IL_8CRE_439 IL_82706.1 | |
| IL_9G6J_192 | 1/A/1026:1029, 1/A/1059:1062 | No text annotation | homologous IL_8CRE_440 IL_85033.2 | |
| IL_9G6J_193 | 1/A/1035:1039, 1/A/1050:1053 | No text annotation | geometric IL_8UIW_002 IL_77658.1 | |
| IL_9G6J_194 | 1/A/1096:1103, 1/A/1114:1119 | 8x6 Sarcin-Ricin with inserted Y; G-bulge | homologous IL_8CRE_442 IL_41756.4 | |
| IL_9G6J_195 | 1/A/1131:1132, 1/A/1617:1619 | Single bulged A | homologous IL_8CRE_443 IL_31462.6 | |
| IL_9G6J_196 | 1/A/1134:1136, 1/A/1614:1615 | No text annotation | homologous IL_8CRE_444 IL_00225.13 | |
| IL_9G6J_197 | 1/A/1142:1145, 1/A/1604:1608 | C-loop | homologous IL_8CRE_445 IL_63596.11 | |
| IL_9G6J_198 | 1/A/1158:1160, 1/A/1450:1452 | Isolated non-canonical cWW pair | homologous IL_8CRE_446 IL_87907.2 | |
| IL_9G6J_199 | 1/A/1163:1164, 1/A/1445:1447 | Minor groove platform | homologous IL_8P9A_433 IL_51454.3 | |
| IL_9G6J_200 | 1/A/1198:1200, 1/A/1434:1436 | Isolated non-canonical cWW pair | homologous IL_8CRE_448 IL_87907.2 | |
| IL_9G6J_201 | 1/A/1209:1221, 1/A/1234:1244 | No text annotation | ||
| IL_9G6J_202 | 1/A/1253:1255, 1/A/1426:1427 | No text annotation | homologous IL_8CRE_451 IL_89505.4 | |
| IL_9G6J_203 | 1/A/1257:1261, 1/A/1422:1424 | No text annotation | geometric IL_8CRE_452 IL_76319.5 | |
| IL_9G6J_204 | 1/A/1257:1264, 1/A/1415:1424 | No text annotation | geometric IL_8CRE_453 IL_66663.1 | |
| IL_9G6J_205 | 1/A/1261:1264, 1/A/1415:1422 | No text annotation | homologous IL_8CRE_454 IL_49612.1 | |
| IL_9G6J_206 | 1/A/1265:1266, 1/A/1412:1414 | Single bulged A | homologous IL_8CRE_455 IL_31462.6 | |
| IL_9G6J_207 | 1/A/1275:1277, 1/A/1308:1310 | Isolated non-canonical cWW pair | homologous IL_8CRE_456 IL_87907.2 | |
| IL_9G6J_208 | 1/A/1291:1293, 1/A/1302:1303 | Minor groove platform | homologous IL_8P9A_443 IL_51454.3 | |
| IL_9G6J_209 | 1/A/1324:1328, 1/A/1368:1371 | No text annotation | homologous IL_8CRE_458 IL_13404.2 | |
| IL_9G6J_210 | 1/A/1330:1333, 1/A/1363:1366 | No text annotation | homologous IL_8CRE_481 IL_78800.1 | |
| IL_9G6J_211 | 1/A/1336:1337, 1/A/1358:1360 | No text annotation | geometric IL_8CRE_098 IL_89505.4 | |
| IL_9G6J_212 | 1/A/1337:1338, 1/A/1355:1358 | Multiple bulged bases | geometric IL_7OS0_002 IL_82107.4 | |
| IL_9G6J_213 | 1/A/1375:1377, 1/A/1393:1398 | No text annotation | geometric IL_8CRE_461 IL_94684.1 | |
| IL_9G6J_214 | 1/A/1466:1473, 1/A/1506:1514 | No text annotation | homologous IL_8CRE_462 IL_91698.1 | |
| IL_9G6J_215 | 1/A/1474:1481, 1/A/1500:1505 | No text annotation | homologous IL_8CRE_463 IL_22564.1 | |
| IL_9G6J_216 | 1/A/1483:1485, 1/A/1496:1498 | No text annotation | homologous IL_8CRE_464 IL_07785.1 | |
| IL_9G6J_217 | 1/A/1527:1532, 1/A/1553:1558 | No text annotation | homologous IL_8CRE_465 IL_85536.2 | |
| IL_9G6J_218 | 1/A/1623:1625, 1/A/1751:1754 | No text annotation | homologous IL_8P9A_452 IL_61438.4 | |
| IL_9G6J_219 | 1/A/1625:1628, 1/A/1747:1751 | No text annotation | homologous IL_8P9A_453 IL_65718.4 | |
| IL_9G6J_220 | 1/A/1629:1631, 1/A/1744:1746 | Isolated non-canonical cWW pair | homologous IL_8CRE_468 IL_87907.2 | |
| IL_9G6J_221 | 1/A/1631:1634, 1/A/1740:1744 | No text annotation | homologous IL_8CRE_469 IL_11399.2 | |
| IL_9G6J_222 | 1/A/1637:1639, 1/A/1735:1737 | Isolated non-canonical cWW pair | homologous IL_8CRE_470 IL_87907.2 | |
| IL_9G6J_223 | 1/A/1640:1643, 1/A/1731:1734 | Double sheared | homologous IL_8P9A_457 IL_09705.15 | |
| IL_9G6J_224 | 1/A/1643:1645, 1/A/1730:1731 | Single bulged U | homologous IL_8P9A_458 IL_89505.4 | |
| IL_9G6J_225 | 1/A/1652:1654, 1/A/1721:1723 | No text annotation | homologous IL_8CRE_473 IL_07785.1 | |
| IL_9G6J_226 | 1/A/1656:1659, 1/A/1716:1719 | Double sheared | homologous IL_8CRE_474 IL_09705.15 | |
| IL_9G6J_227 | 1/A/1662:1665, 1/A/1710:1713 | No text annotation | homologous IL_8CRE_475 IL_77658.1 | |
| IL_9G6J_228 | 1/A/1665:1669, 1/A/1706:1710 | Triple sheared | homologous IL_8CRE_476 IL_50730.2 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_9G6J_001 | No text annotation | ||
| IL_9G6J_050 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_9G6J_001 | 1/1/112:122, 1/1/148:157, 1/1/263:267 | No text annotation | homologous J3_8CRE_001 J3_19664.1 | |
| J3_9G6J_002 | 1/1/112:123, 1/1/143:157, 1/1/263:267 | No text annotation | ||
| J3_9G6J_003 | 1/1/184:188, 1/1/204:213, 1/1/225:230 | No text annotation | homologous J3_8CRE_003 J3_75408.1 | |
| J3_9G6J_004 | 1/1/340:356, 1/1/363:368, 1/4/21:24 | No text annotation | homologous J3_8P9A_045 J3_30040.2 | |
| J3_9G6J_005 | 1/1/369:376, 1/1/403:404, 1/4/19:20 | No text annotation | geometric J3_8P9A_046 J3_60031.2 | |
| J3_9G6J_006 | 1/1/369:379, 1/1/390:404, 1/4/19:20 | No text annotation | homologous J3_8CRE_006 J3_92134.2 | |
| J3_9G6J_007 | 1/1/436:439, 1/1/488:490, 1/1/616:621 | No text annotation | homologous J3_8CRE_007 J3_28315.1 | |
| J3_9G6J_008 | 1/1/497:498, 1/1/586:595, 1/1/604:609 | No text annotation | homologous J3_8CRE_008 J3_83726.1 | |
| J3_9G6J_009 | 1/1/810:816, 1/1/901:903, 1/1/919:922 | No text annotation | homologous J3_8CRE_009 J3_64189.2 | |
| J3_9G6J_010 | 1/1/825:827, 1/1/859:863, 1/1/888:891 | No text annotation | homologous J3_8CRE_010 J3_44724.7 | |
| J3_9G6J_011 | 1/1/982:983, 1/1/1058:1062, 1/1/1088:1094 | No text annotation | homologous J3_8CRE_011 J3_09667.1 | |
| J3_9G6J_012 | 1/1/1475:1481, 1/1/1853:1855, 1/1/1867:1870 | No text annotation | homologous J3_8P9A_053 J3_19545.2 | |
| J3_9G6J_013 | 1/1/1484:1487, 1/1/1833:1839, 1/1/1848:1850 | No text annotation | homologous J3_8CRE_014 J3_19545.2 | |
| J3_9G6J_014 | 1/1/1522:1527, 1/1/1587:1591, 1/1/1608:1609 | No text annotation | homologous J3_8P9A_055 J3_31965.2 | |
| J3_9G6J_015 | 1/1/1533:1538, 1/1/1547:1556, 1/1/1574:1580 | No text annotation | homologous J3_8CRE_016 J3_65403.1 | |
| J3_9G6J_016 | 1/1/1627:1628, 1/1/1637:1641, 1/1/1806:1807 | No text annotation | homologous J3_8CRE_017 J3_75962.2 | |
| J3_9G6J_017 | 1/1/1650:1654, 1/1/1787:1788, 1/1/1792:1797 | No text annotation | homologous J3_8CRE_018 J3_12393.2 | |
| J3_9G6J_018 | 1/1/2410:2413, 1/1/2490:2494, 1/1/2563:2569 | No text annotation | ||
| J3_9G6J_019 | 1/1/2507:2510, 1/1/2525:2540, 1/1/2550:2553 | No text annotation | homologous J3_8CRE_020 J3_28639.1 | |
| J3_9G6J_020 | 1/1/2623:2625, 1/1/2726:2737, 1/1/2765:2770 | No text annotation | homologous J3_8CRE_021 J3_20992.1 | |
| J3_9G6J_021 | 1/1/2636:2638, 1/1/2662:2664, 1/1/2673:2678 | No text annotation | homologous J3_8P9A_062 J3_61124.2 | |
| J3_9G6J_022 | 1/1/2858:2861, 1/1/2886:2888, 1/1/2902:2908 | No text annotation | homologous J3_8P9A_063 J3_62630.1 | |
| J3_9G6J_023 | 1/1/3141:3146, 1/1/3177:3185, 1/1/3230:3244 | No text annotation | ||
| J3_9G6J_024 | 1/1/3263:3264, 1/1/3280:3283, 1/1/3353:3355 | No text annotation | homologous J3_8CRE_025 J3_99595.1 | |
| J3_9G6J_025 | 1/3/9:14, 1/3/66:67, 1/3/111:112 | No text annotation | homologous J3_8P9A_066 J3_12003.2 | |
| J3_9G6J_026 | 1/4/44:45, 1/4/58:64, 1/4/96:100 | No text annotation | homologous J3_8CRE_027 J3_35667.2 | |
| J3_9G6J_027 | 1/A/41:42, 1/A/431:437, 1/A/462:464 | No text annotation | geometric J3_8CRE_071 J3_67856.4 | |
| J3_9G6J_028 | 1/A/41:48, 1/A/429:437, 1/A/462:464 | No text annotation | homologous J3_8P9A_069 J3_46317.4 | |
| J3_9G6J_029 | 1/A/631:633, 1/A/846:851, 1/A/947:951 | No text annotation | homologous J3_8CRE_074 J3_17385.4 | |
| J3_9G6J_030 | 1/A/745:748, 1/A/758:760, 1/A/769:774 | No text annotation | homologous J3_8CRE_075 J3_97642.1 | |
| J3_9G6J_031 | 1/A/866:870, 1/A/912:921, 1/A/928:932 | No text annotation | homologous J3_8CRE_076 J3_83592.1 | |
| J3_9G6J_032 | 1/A/1022:1024, 1/A/1064:1068, 1/A/1075:1079 | No text annotation | homologous J3_8P9A_075 J3_94999.1 | |
| J3_9G6J_033 | 1/A/1146:1149, 1/A/1568:1574, 1/A/1596:1603 | No text annotation | homologous J3_8CRE_078 J3_25303.4 | |
| J3_9G6J_034 | 1/A/1153:1156, 1/A/1454:1456, 1/A/1561:1564 | No text annotation | homologous J3_8CRE_079 J3_52655.4 | |
| J3_9G6J_035 | 1/A/1165:1172, 1/A/1183:1194, 1/A/1440:1444 | No text annotation | homologous J3_8CRE_080 J3_83516.4 | |
| J3_9G6J_036 | 1/A/1200:1205, 1/A/1248:1252, 1/A/1428:1434 | No text annotation | homologous J3_8CRE_081 J3_87797.1 | |
| J3_9G6J_037 | 1/A/1267:1273, 1/A/1312:1317, 1/A/1405:1411 | No text annotation | homologous J3_8CRE_082 J3_04315.1 | |
| J3_9G6J_038 | 1/A/1277:1279, 1/A/1288:1291, 1/A/1303:1308 | No text annotation | ||
| J3_9G6J_039 | 1/A/1321:1323, 1/A/1372:1375, 1/A/1398:1401 | No text annotation | geometric J3_8CRE_084 J3_82365.4 | |
| J3_9G6J_040 | 1/A/1321:1323, 1/A/1372:1377, 1/A/1393:1401 | No text annotation | homologous J3_8CRE_085 J3_88233.1 | |
| J3_9G6J_041 | 1/A/1456:1460, 1/A/1520:1527, 1/A/1558:1561 | No text annotation | homologous J3_8CRE_086 J3_37047.6 | |
| J4_9G6J_001 | 1/1/111:112, 1/1/267:272, 1/1/293:299, 1/1/316:319 | No text annotation | homologous J4_8CRE_001 J4_45801.6 | |
| J4_9G6J_002 | 1/1/184:188, 1/1/204:207, 1/1/211:213, 1/1/225:230 | No text annotation | homologous J4_8CRE_002 J4_12410.1 | |
| J4_9G6J_003 | 1/1/1447:1453, 1/1/1471:1472, 1/1/1873:1876, 1/1/2330:2331 | No text annotation | homologous J4_8CRE_003 J4_87855.1 | |
| J4_9G6J_004 | 1/1/1488:1492, 1/1/1516:1521, 1/1/1610:1611, 1/1/1825:1832 | No text annotation | homologous J4_8CRE_004 J4_69051.6 | |
| J4_9G6J_005 | 1/1/1670:1671, 1/1/1689:1690, 1/1/1748:1749, 1/1/1768:1769 | No text annotation | homologous J4_8P9A_016 J4_24280.2 | |
| J4_9G6J_006 | 1/1/2108:2112, 1/1/2124:2128, 1/1/2164:2168, 1/1/2295:2300 | No text annotation | homologous J4_8CRE_006 J4_07509.2 | |
| J4_9G6J_007 | 1/1/2170:2172, 1/1/2226:2227, 1/1/2245:2254, 1/1/2288:2293 | No text annotation | homologous J4_8CRE_007 J4_63658.1 | |
| J4_9G6J_008 | 1/1/2626:2630, 1/1/2684:2688, 1/1/2712:2714, 1/1/2723:2725 | No text annotation | homologous J4_8CRE_008 J4_04930.6 | |
| J4_9G6J_009 | 1/1/2982:2984, 1/1/3014:3015, 1/1/3070:3072, 1/1/3106:3108 | No text annotation | homologous J4_8CRE_009 J4_65356.1 | |
| J4_9G6J_010 | 1/A/99:107, 1/A/305:307, 1/A/355:359, 1/A/381:382 | No text annotation | homologous J4_8CRE_021 J4_15241.1 | |
| J4_9G6J_011 | 1/A/620:622, 1/A/960:965, 1/A/1006:1017, 1/A/1088:1089 | No text annotation | homologous J4_8CRE_022 J4_61885.6 | |
| J4_9G6J_012 | 1/AT/7:10, 1/AT/26:28, 1/AT/44:50, 1/AT/66:67 | tRNA junction | homologous J4_1IL2_001 J4_70449.28 | |
| J4_9G6J_013 | 1/PT/7:10, 1/PT/26:28, 1/PT/44:50, 1/PT/66:67 | No text annotation | homologous J4_6CFJ_015 J4_70449.28 | |
| J5_9G6J_001 | 1/1/19:21, 1/4/35:42, 1/4/102:107, 1/4/115:116, 1/4/137:139 | No text annotation | homologous J5_8CRE_001 J5_01737.2 | |
| J5_9G6J_002 | 1/1/656:661, 1/1/795:798, 1/1/937:940, 1/1/1371:1372, 1/1/1427:1433 | No text annotation | homologous J5_8P9A_011 J5_63811.1 | |
| J5_9G6J_003 | 1/1/673:676, 1/1/700:704, 1/1/711:719, 1/1/745:747, 1/1/778:783 | No text annotation | homologous J5_8P9A_012 J5_23272.1 | |
| J5_9G6J_004 | 1/1/1902:1910, 1/1/1934:1935, 1/1/2087:2088, 1/1/2092:2100, 1/1/2309:2311 | No text annotation | homologous J5_8CRE_004 J5_62523.6 | |
| J5_9G6J_005 | 1/1/2377:2384, 1/1/2787:2795, 1/1/2839:2848, 1/1/2923:2929, 1/1/2947:2952 | No text annotation | ||
| J5_9G6J_006 | 1/1/2394:2397, 1/1/2583:2586, 1/1/2599:2600, 1/1/2622:2623, 1/1/2770:2776 | No text annotation | homologous J5_8P9A_015 J5_08912.1 | |
| J5_9G6J_007 | 1/A/31:35, 1/A/471:477, 1/A/507:514, 1/A/534:544, 1/A/590:593 | No text annotation | ||
| J5_9G6J_008 | 1/A/54:57, 1/A/90:97, 1/A/384:386, 1/A/407:409, 1/A/420:424 | No text annotation | homologous J5_8CRE_020 J5_59910.6 | |
| J5_9G6J_009 | 1/A/634:639, 1/A/691:696, 1/A/725:729, 1/A/791:801, 1/A/839:845 | No text annotation | ||
| J6_9G6J_001 | 1/1/21:26, 1/1/57:67, 1/1/74:78, 1/1/105:109, 1/1/321:331, 1/4/32:35 | No text annotation | ||
| J6_9G6J_002 | 1/1/2394:2397, 1/1/2583:2586, 1/1/2599:2600, 1/1/2622:2625, 1/1/2726:2737, 1/1/2765:2776 | No text annotation | ||
| J7_9G6J_001 | 1/1/945:950, 1/1/963:964, 1/1/1110:1113, 1/1/1137:1142, 1/1/1153:1157, 1/1/1334:1335, 1/1/1361:1366 | No text annotation |
Problematic loops
No problematic loops
Coloring options: