HL_9G6J_072
3D structure
- PDB id
- 9G6J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- AUGAAUUGCAGAUAUUCGUGAAU
- Length
- 23 nucleotides
- Bulged bases
- 9G6J|1|4|U|80, 9G6J|1|4|C|84, 9G6J|1|4|U|86
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9G6J|1|4|A|68
9G6J|1|4|U|69
9G6J|1|4|G|70
9G6J|1|4|A|71
9G6J|1|4|A|72
9G6J|1|4|U|73
9G6J|1|4|U|74
9G6J|1|4|G|75
9G6J|1|4|C|76
9G6J|1|4|A|77
9G6J|1|4|G|78
9G6J|1|4|A|79
9G6J|1|4|U|80
9G6J|1|4|A|81
9G6J|1|4|U|82
9G6J|1|4|U|83
9G6J|1|4|C|84
9G6J|1|4|G|85
9G6J|1|4|U|86
9G6J|1|4|G|87
9G6J|1|4|A|88
9G6J|1|4|A|89
9G6J|1|4|U|90
Current chains
- Chain 4
- 5.8S rRNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain 9
- Ribosomal 60S subunit protein L26B
- Chain AI
- Ribosomal 60S subunit protein L35A
- Chain AK
- Ribosomal protein L37
- Chain AM
- 60S ribosomal protein L39
Coloring options: