HL_9G6J_076
3D structure
- PDB id
- 9G6J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- CAAUUUAUACAG
- Length
- 12 nucleotides
- Bulged bases
- 9G6J|1|A|U|77
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9G6J_076 not in the Motif Atlas
- Homologous match to HL_8CRE_192
- Geometric discrepancy: 0.236
- The information below is about HL_8CRE_192
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81312.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
9G6J|1|A|C|70
9G6J|1|A|A|71
9G6J|1|A|A|72
9G6J|1|A|U|73
9G6J|1|A|U|74
9G6J|1|A|U|75
9G6J|1|A|A|76
9G6J|1|A|U|77
9G6J|1|A|A|78
9G6J|1|A|C|79
9G6J|1|A|A|80
9G6J|1|A|G|81
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain H
- 40S ribosomal protein S6
Coloring options: