HL_9G8M_109
3D structure
- PDB id
- 9G8M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome bound by a SKI2-exosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- AAAUACAAUUUUGAGAGGUUAAUAAAUU
- Length
- 28 nucleotides
- Bulged bases
- 9G8M|1|X|G|38, 9G8M|1|X|U|39, 9G8M|1|X|U|40
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9G8M|1|X|A|21
9G8M|1|X|A|22
9G8M|1|X|A|23
9G8M|1|X|U|24
9G8M|1|X|A|25
9G8M|1|X|C|26
9G8M|1|X|A|27
9G8M|1|X|A|28
9G8M|1|X|U|29
9G8M|1|X|U|30
9G8M|1|X|U|31
9G8M|1|X|U|32
9G8M|1|X|G|33
9G8M|1|X|A|34
9G8M|1|X|G|35
9G8M|1|X|A|36
9G8M|1|X|G|37
9G8M|1|X|G|38
9G8M|1|X|U|39
9G8M|1|X|U|40
9G8M|1|X|A|41
9G8M|1|X|A|42
9G8M|1|X|U|43
9G8M|1|X|A|44
9G8M|1|X|A|45
9G8M|1|X|A|46
9G8M|1|X|U|47
9G8M|1|X|U|48
Current chains
- Chain X
- CrPV-IRES RNA
Nearby chains
- Chain LJ
- 60S ribosomal protein L11
- Chain Lo
- 60S ribosomal protein L36a
Coloring options: