HL_9GFT_048

3D structure

PDB id

9GFT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the HrpA-bound E. coli disome, Class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9GFT_048 not in the Motif Atlas

Homologous match to HL_6CZR_081

Geometric discrepancy: 0.1653

The information below is about HL_6CZR_081

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

9GFT|1|AA|C|379
9GFT|1|AA|G|380
9GFT|1|AA|C|381
9GFT|1|AA|A|382
9GFT|1|AA|A|383
9GFT|1|AA|G|384

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AO

Small ribosomal subunit protein bS16