9GFT Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_9GFT_001 | 1/0/12:22 | No text annotation | homologous HL_5J7L_001 HL_89881.5 | |
| HL_9GFT_002 | 1/0/81:88 | No text annotation | ||
| HL_9GFT_003 | 1/0/158:163 | GNRA | homologous HL_5J7L_003 HL_37824.7 | |
| HL_9GFT_004 | 1/0/186:191 | GNRA | homologous HL_5J7L_004 HL_37824.7 | |
| HL_9GFT_005 | 1/0/207:212 | UNCG | homologous HL_5J7L_005 HL_34617.5 | |
| HL_9GFT_006 | 1/0/259:267 | GNRA related | homologous HL_5J7L_006 HL_84299.4 | |
| HL_9GFT_007 | 1/0/296:301 | GNRA | homologous HL_5J7L_007 HL_37824.7 | |
| HL_9GFT_008 | 1/0/320:333 | No text annotation | homologous HL_5J7L_008 HL_81205.3 | |
| HL_9GFT_009 | 1/0/342:347 | UNCG | homologous HL_6CZR_080 NA | |
| HL_9GFT_010 | 1/0/379:384 | GNRA | homologous HL_5J7L_010 HL_37824.7 | |
| HL_9GFT_011 | 1/0/419:424 | UNCG | homologous HL_4LFB_011 HL_34617.5 | |
| HL_9GFT_012 | 1/0/462:470 | GNRA related | homologous HL_5J7L_012 HL_81538.2 | |
| HL_9GFT_013 | 1/0/522:527 | GNRA variation | homologous HL_5J7L_205 HL_37824.7 | |
| HL_9GFT_014 | 1/0/617:623 | No text annotation | homologous HL_5J7L_014 HL_10453.3 | |
| HL_9GFT_015 | 1/0/689:698 | No text annotation | homologous HL_4LFB_015 HL_75293.5 | |
| HL_9GFT_016 | 1/0/726:731 | GNRA | homologous HL_5J7L_016 HL_37824.7 | |
| HL_9GFT_017 | 1/0/786:796 | No text annotation | homologous HL_5J7L_017 HL_75293.5 | |
| HL_9GFT_018 | 1/0/840:846 | No text annotation | ||
| HL_9GFT_019 | 1/0/862:867 | GNRA | homologous HL_5J7L_019 HL_37824.7 | |
| HL_9GFT_020 | 1/0/897:902 | GNRA | homologous HL_4LFB_020 HL_37824.7 | |
| HL_9GFT_021 | 1/0/963:972 | No text annotation | homologous HL_5J7L_021 HL_50779.4 | |
| HL_9GFT_022 | 1/0/1009:1019 | No text annotation | ||
| HL_9GFT_023 | 1/0/1027:1033 | No text annotation | ||
| HL_9GFT_024 | 1/0/1076:1081 | GNRA | homologous HL_5J7L_023 HL_37824.7 | |
| HL_9GFT_025 | 1/0/1089:1096 | T-loop related | homologous HL_5J7L_024 HL_77436.5 | |
| HL_9GFT_026 | 1/0/1134:1140 | No text annotation | homologous HL_4LFB_026 HL_87954.2 | |
| HL_9GFT_027 | 1/0/1165:1171 | GNRA | homologous HL_5J7L_026 HL_93535.1 | |
| HL_9GFT_028 | 1/0/1265:1270 | GNRA | homologous HL_5J7L_027 HL_37824.7 | |
| HL_9GFT_029 | 1/0/1314:1323 | T-loop with 3 stacked bulged bases | homologous HL_5J7L_028 HL_02887.3 | |
| HL_9GFT_030 | 1/0/1356:1366 | No text annotation | homologous HL_4LFB_030 HL_06226.4 | |
| HL_9GFT_031 | 1/0/1449:1454 | UNCG | homologous HL_5J7L_030 HL_34617.5 | |
| HL_9GFT_032 | 1/0/1515:1520 | GNRA | homologous HL_5J7L_031 HL_37824.7 | |
| HL_9GFT_033 | 1/A/13:22 | No text annotation | homologous HL_6PMO_003 NA | |
| HL_9GFT_034 | 1/A/31:39 | tRNA anticodon loop | homologous HL_6GSK_203 HL_06059.5 | |
| HL_9GFT_035 | 1/A/53:61 | T-loop with 2 stacked bulged bases | homologous HL_4YYE_003 HL_28252.6 | |
| HL_9GFT_036 | 1/A3/13:23 | tRNA D-loop | homologous HL_1QF6_001 HL_20811.4 | |
| HL_9GFT_037 | 1/A3/32:40 | tRNA anticodon loop | homologous HL_5IBB_210 HL_06059.5 | |
| HL_9GFT_038 | 1/A3/53:63 | No text annotation | homologous HL_5E81_236 NA | |
| HL_9GFT_039 | 1/AA/12:22 | No text annotation | homologous HL_5J7L_001 HL_89881.5 | |
| HL_9GFT_040 | 1/AA/81:88 | No text annotation | ||
| HL_9GFT_041 | 1/AA/158:163 | GNRA | homologous HL_4LFB_003 HL_37824.7 | |
| HL_9GFT_042 | 1/AA/186:191 | GNRA | homologous HL_5J7L_004 HL_37824.7 | |
| HL_9GFT_043 | 1/AA/207:212 | UNCG | homologous HL_5J7L_005 HL_34617.5 | |
| HL_9GFT_044 | 1/AA/259:267 | GNRA related | homologous HL_5J7L_006 HL_84299.4 | |
| HL_9GFT_045 | 1/AA/296:301 | GNRA | homologous HL_5J7L_007 HL_37824.7 | |
| HL_9GFT_046 | 1/AA/320:333 | No text annotation | homologous HL_5J7L_008 HL_81205.3 | |
| HL_9GFT_047 | 1/AA/342:347 | UNCG | homologous HL_4LFB_009 HL_34617.5 | |
| HL_9GFT_048 | 1/AA/379:384 | GNRA | homologous HL_6CZR_081 NA | |
| HL_9GFT_049 | 1/AA/419:424 | UNCG | homologous HL_4LFB_011 HL_34617.5 | |
| HL_9GFT_050 | 1/AA/462:470 | GNRA related | homologous HL_5J7L_012 HL_81538.2 | |
| HL_9GFT_051 | 1/AA/522:527 | GNRA variation | homologous HL_5J7L_205 HL_37824.7 | |
| HL_9GFT_052 | 1/AA/617:623 | No text annotation | homologous HL_4LFB_014 HL_10453.3 | |
| HL_9GFT_053 | 1/AA/689:698 | No text annotation | homologous HL_4LFB_015 HL_75293.5 | |
| HL_9GFT_054 | 1/AA/726:731 | GNRA | homologous HL_5J7L_016 HL_37824.7 | |
| HL_9GFT_055 | 1/AA/786:796 | No text annotation | homologous HL_5J7L_017 HL_75293.5 | |
| HL_9GFT_056 | 1/AA/840:846 | No text annotation | ||
| HL_9GFT_057 | 1/AA/862:867 | GNRA | homologous HL_4LFB_019 HL_37824.7 | |
| HL_9GFT_058 | 1/AA/897:902 | GNRA | homologous HL_4LFB_020 HL_37824.7 | |
| HL_9GFT_059 | 1/AA/963:972 | No text annotation | homologous HL_4LFB_021 HL_50779.4 | |
| HL_9GFT_060 | 1/AA/1027:1034 | No text annotation | ||
| HL_9GFT_061 | 1/AA/1076:1081 | GNRA | homologous HL_5J7L_023 HL_37824.7 | |
| HL_9GFT_062 | 1/AA/1089:1096 | T-loop related | homologous HL_5J7L_024 HL_77436.5 | |
| HL_9GFT_063 | 1/AA/1134:1140 | No text annotation | homologous HL_4LFB_026 HL_87954.2 | |
| HL_9GFT_064 | 1/AA/1165:1171 | GNRA | homologous HL_5J7L_026 HL_93535.1 | |
| HL_9GFT_065 | 1/AA/1265:1270 | GNRA | homologous HL_4LFB_028 HL_37824.7 | |
| HL_9GFT_066 | 1/AA/1314:1323 | T-loop with 3 stacked bulged bases | homologous HL_4LFB_029 HL_02887.3 | |
| HL_9GFT_067 | 1/AA/1356:1366 | No text annotation | homologous HL_5J7L_029 HL_06226.4 | |
| HL_9GFT_068 | 1/AA/1449:1454 | UNCG | homologous HL_5J7L_030 HL_34617.5 | |
| HL_9GFT_069 | 1/AA/1515:1520 | GNRA | homologous HL_5J7L_031 HL_37824.7 | |
| HL_9GFT_070 | 1/AU/13:22 | tRNA D-loop | homologous HL_1QF6_001 HL_20811.4 | |
| HL_9GFT_071 | 1/AU/31:39 | No text annotation | homologous HL_9DFC_104 HL_06059.5 | |
| HL_9GFT_072 | 1/AU/53:61 | T-loop with 2 stacked bulged bases | homologous HL_3WQY_003 HL_28252.6 | |
| HL_9GFT_073 | 1/AV/59:68 | No text annotation | homologous HL_5J7L_134 HL_35677.3 | |
| HL_9GFT_074 | 1/AV/86:96 | No text annotation | ||
| HL_9GFT_075 | 1/AV/123:128 | No text annotation | homologous HL_5J7L_136 HL_82710.2 | |
| HL_9GFT_076 | 1/AV/137:142 | Mini UNCG | geometric HL_4WF9_037 HL_48778.2 | |
| HL_9GFT_077 | 1/AV/158:168 | No text annotation | homologous HL_5J7L_138 HL_68257.1 | |
| HL_9GFT_078 | 1/AV/194:201 | No text annotation | homologous HL_4WF9_006 HL_30068.2 | |
| HL_9GFT_079 | 1/AV/225:230 | No text annotation | homologous HL_5J7L_140 HL_62934.1 | |
| HL_9GFT_080 | 1/AV/246:252 | No text annotation | homologous HL_4WF9_008 HL_37369.2 | |
| HL_9GFT_081 | 1/AV/305:312 | T-loop with 2 stacked bulged bases | homologous HL_5J7L_142 HL_01609.3 | |
| HL_9GFT_082 | 1/AV/319:323 | No text annotation | homologous HL_9DFE_010 HL_75660.5 | |
| HL_9GFT_083 | 1/AV/327:335 | T-loop with unstacked turn | homologous HL_5J7L_144 HL_27670.2 | |
| HL_9GFT_084 | 1/AV/382:392 | No text annotation | homologous HL_5J7L_145 HL_91503.7 | |
| HL_9GFT_085 | 1/AV/410:417 | Pseudoknot geometry | homologous HL_5J7L_146 HL_30680.3 | |
| HL_9GFT_086 | 1/AV/462:467 | GNRA | homologous HL_4WF9_015 HL_37824.7 | |
| HL_9GFT_087 | 1/AV/487:493 | GNRA | homologous HL_5J7L_148 HL_37824.7 | |
| HL_9GFT_088 | 1/AV/543:550 | No text annotation | homologous HL_5J7L_149 HL_09452.1 | |
| HL_9GFT_089 | 1/AV/566:575 | T-loop with 2 stacked bulged bases | homologous HL_5J7L_150 HL_28252.6 | |
| HL_9GFT_090 | 1/AV/611:617 | No text annotation | homologous HL_5J7L_151 HL_80922.2 | |
| HL_9GFT_091 | 1/AV/629:634 | GNRA | homologous HL_5J7L_152 HL_37824.7 | |
| HL_9GFT_092 | 1/AV/641:647 | No text annotation | homologous HL_5J7L_153 HL_13529.1 | |
| HL_9GFT_093 | 1/AV/712:719 | GNRA wlth tandem sheared | homologous HL_5J7L_154 HL_81538.2 | |
| HL_9GFT_094 | 1/AV/744:753 | No text annotation | homologous HL_7A0S_022 HL_88205.2 | |
| HL_9GFT_095 | 1/AV/779:785 | GNRA related | geometric HL_2NUE_001 HL_53890.2 | |
| HL_9GFT_096 | 1/AV/826:831 | No text annotation | homologous HL_5J7L_157 HL_55195.3 | |
| HL_9GFT_097 | 1/AV/955:962 | GNRA | homologous HL_7A0S_026 HL_37824.7 | |
| HL_9GFT_098 | 1/AV/978:985 | No text annotation | homologous HL_5J7L_160 HL_42998.2 | |
| HL_9GFT_099 | 1/AV/1063:1075 | No text annotation | ||
| HL_9GFT_100 | 1/AV/1092:1099 | GNRA wlth tandem sheared | homologous HL_6PRV_002 HL_81538.2 | |
| HL_9GFT_101 | 1/AV/1172:1177 | No text annotation | geometric HL_8P9A_231 HL_13189.1 | |
| HL_9GFT_102 | 1/AV/1222:1227 | GNRA | homologous HL_7A0S_031 HL_37824.7 | |
| HL_9GFT_103 | 1/AV/1281:1289 | T-loop with 2 stacked bulged bases | homologous HL_5J7L_165 HL_28252.6 | |
| HL_9GFT_104 | 1/AV/1324:1330 | Pseudoknot geometry with 3' bulge | homologous HL_5J7L_166 HL_57176.2 | |
| HL_9GFT_105 | 1/AV/1363:1368 | GNRA | homologous HL_5J7L_167 HL_37824.7 | |
| HL_9GFT_106 | 1/AV/1389:1398 | No text annotation | homologous HL_5J7L_168 HL_81545.2 | |
| HL_9GFT_107 | 1/AV/1451:1459 | Mini UNCG with extended bulge | homologous HL_5J7L_169 HL_22622.1 | |
| HL_9GFT_108 | 1/AV/1492:1498 | Pseudoknot geometry with 3' bulge | homologous HL_5J7L_170 HL_57176.2 | |
| HL_9GFT_109 | 1/AV/1533:1538 | UNCG | homologous HL_5J7L_171 HL_34617.5 | |
| HL_9GFT_110 | 1/AV/1565:1568 | Mini UNCG | homologous HL_5J7L_172 HL_48778.2 | |
| HL_9GFT_111 | 1/AV/1612:1619 | No text annotation | homologous HL_4WF9_038 HL_89567.2 | |
| HL_9GFT_112 | 1/AV/1630:1636 | GNRA | homologous HL_5J7L_174 HL_37824.7 | |
| HL_9GFT_113 | 1/AV/1691:1696 | UNCG | homologous HL_5J7L_175 HL_34617.5 | |
| HL_9GFT_114 | 1/AV/1727:1733 | No text annotation | homologous HL_5J7L_214 HL_08100.1 | |
| HL_9GFT_115 | 1/AV/1752:1756 | No text annotation | homologous HL_5J7L_177 HL_80709.3 | |
| HL_9GFT_116 | 1/AV/1777:1787 | No text annotation | homologous HL_4WF9_043 HL_01962.2 | |
| HL_9GFT_117 | 1/AV/1806:1811 | GNRA related | homologous HL_5J7L_179 HL_04783.2 | |
| HL_9GFT_118 | 1/AV/1868:1873 | GNRA variation | homologous HL_5J7L_180 HL_37824.7 | |
| HL_9GFT_119 | 1/AV/1910:1920 | No text annotation | homologous HL_9DFE_046 HL_25847.2 | |
| HL_9GFT_120 | 1/AV/1949:1957 | No text annotation | homologous HL_5J7L_182 HL_20167.2 | |
| HL_9GFT_121 | 1/AV/2027:2036 | No text annotation | homologous HL_5J7L_183 HL_61996.2 | |
| HL_9GFT_122 | 1/AV/2142:2149 | No text annotation | ||
| HL_9GFT_123 | 1/AV/2209:2215 | No text annotation | homologous HL_5J7L_185 HL_49922.4 | |
| HL_9GFT_124 | 1/AV/2248:2256 | No text annotation | homologous HL_4WF9_049 HL_85367.2 | |
| HL_9GFT_125 | 1/AV/2264:2276 | No text annotation | homologous HL_5J7L_187 HL_91939.2 | |
| HL_9GFT_126 | 1/AV/2303:2313 | No text annotation | homologous HL_9DFE_053 NA | |
| HL_9GFT_127 | 1/AV/2324:2331 | Pseudoknot geometry | homologous HL_5J7L_189 HL_93324.4 | |
| HL_9GFT_128 | 1/AV/2356:2361 | GNRA | homologous HL_5J7L_190 HL_37824.7 | |
| HL_9GFT_129 | 1/AV/2374:2379 | GNRA | homologous HL_4WF9_054 HL_37824.7 | |
| HL_9GFT_130 | 1/AV/2404:2413 | No text annotation | homologous HL_5J7L_192 HL_53454.2 | |
| HL_9GFT_131 | 1/AV/2471:2479 | No text annotation | homologous HL_7A0S_059 HL_32735.2 | |
| HL_9GFT_132 | 1/AV/2528:2535 | No text annotation | homologous HL_9DFE_059 HL_31585.3 | |
| HL_9GFT_133 | 1/AV/2551:2557 | No text annotation | homologous HL_5J7L_195 HL_30068.2 | |
| HL_9GFT_134 | 1/AV/2594:2599 | GNRA | homologous HL_5J7L_196 HL_37824.7 | |
| HL_9GFT_135 | 1/AV/2658:2663 | GNRA | homologous HL_5J7L_197 HL_37824.7 | |
| HL_9GFT_136 | 1/AV/2701:2706 | Ribsomal LSU H95 | homologous HL_5J7L_198 HL_65794.5 | |
| HL_9GFT_137 | 1/AV/2745:2759 | No text annotation | homologous HL_5J7L_199 HL_74055.2 | |
| HL_9GFT_138 | 1/AV/2796:2799 | Mini UNCG | geometric HL_4V88_192 NA | |
| HL_9GFT_139 | 1/AV/2819:2827 | No text annotation | homologous HL_5J7L_201 HL_64690.6 | |
| HL_9GFT_140 | 1/AV/2856:2861 | GNRA | homologous HL_9DFE_066 HL_37824.7 | |
| HL_9GFT_141 | 1/AW/38:44 | No text annotation | homologous HL_8C3A_073 NA | |
| HL_9GFT_142 | 1/AW/86:90 | Mini UNCG | homologous HL_5J7L_204 HL_48778.2 | |
| HL_9GFT_143 | 1/M/12:22 | No text annotation | homologous HL_4JYZ_001 HL_40252.3 | |
| HL_9GFT_144 | 1/M/30:38 | tRNA anticodon loop | homologous HL_6UFG_007 HL_06059.5 | |
| HL_9GFT_145 | 1/M/52:60 | T-loop with 2 stacked bulged bases | homologous HL_7MRL_003 HL_28252.6 | |
| HL_9GFT_146 | 1/N/59:68 | No text annotation | homologous HL_5J7L_134 HL_35677.3 | |
| HL_9GFT_147 | 1/N/87:95 | No text annotation | homologous HL_5J7L_135 HL_80241.1 | |
| HL_9GFT_148 | 1/N/123:128 | No text annotation | homologous HL_5J7L_136 HL_82710.2 | |
| HL_9GFT_149 | 1/N/137:142 | No text annotation | geometric HL_4V88_198 NA | |
| HL_9GFT_150 | 1/N/158:168 | No text annotation | homologous HL_5J7L_138 HL_68257.1 | |
| HL_9GFT_151 | 1/N/194:201 | No text annotation | homologous HL_5J7L_139 HL_30068.2 | |
| HL_9GFT_152 | 1/N/225:230 | No text annotation | homologous HL_5J7L_140 HL_62934.1 | |
| HL_9GFT_153 | 1/N/246:252 | No text annotation | homologous HL_7A0S_008 HL_37369.2 | |
| HL_9GFT_154 | 1/N/305:312 | T-loop with 2 stacked bulged bases | homologous HL_5J7L_142 HL_01609.3 | |
| HL_9GFT_155 | 1/N/319:323 | No text annotation | geometric HL_8VTW_010 NA | |
| HL_9GFT_156 | 1/N/327:335 | T-loop with unstacked turn | homologous HL_5J7L_144 HL_27670.2 | |
| HL_9GFT_157 | 1/N/382:392 | No text annotation | homologous HL_5J7L_145 HL_91503.7 | |
| HL_9GFT_158 | 1/N/410:417 | Pseudoknot geometry | homologous HL_5J7L_146 HL_30680.3 | |
| HL_9GFT_159 | 1/N/462:467 | GNRA | homologous HL_4WF9_015 HL_37824.7 | |
| HL_9GFT_160 | 1/N/487:493 | GNRA | homologous HL_5J7L_148 HL_37824.7 | |
| HL_9GFT_161 | 1/N/543:550 | No text annotation | homologous HL_5J7L_149 HL_09452.1 | |
| HL_9GFT_162 | 1/N/566:575 | T-loop with 2 stacked bulged bases | homologous HL_5J7L_150 HL_28252.6 | |
| HL_9GFT_163 | 1/N/611:617 | No text annotation | homologous HL_5J7L_151 HL_80922.2 | |
| HL_9GFT_164 | 1/N/629:634 | GNRA | homologous HL_5J7L_152 HL_37824.7 | |
| HL_9GFT_165 | 1/N/641:647 | No text annotation | homologous HL_5J7L_153 HL_13529.1 | |
| HL_9GFT_166 | 1/N/712:719 | GNRA wlth tandem sheared | homologous HL_5J7L_154 HL_81538.2 | |
| HL_9GFT_167 | 1/N/744:753 | No text annotation | homologous HL_7A0S_022 HL_88205.2 | |
| HL_9GFT_168 | 1/N/779:785 | No text annotation | homologous HL_7A0S_023 HL_53890.2 | |
| HL_9GFT_169 | 1/N/826:831 | No text annotation | homologous HL_5J7L_157 HL_55195.3 | |
| HL_9GFT_170 | 1/N/955:962 | GNRA | homologous HL_7A0S_026 HL_37824.7 | |
| HL_9GFT_171 | 1/N/978:985 | No text annotation | homologous HL_5J7L_160 HL_42998.2 | |
| HL_9GFT_172 | 1/N/1064:1074 | No text annotation | homologous HL_6PRV_001 HL_19210.3 | |
| HL_9GFT_173 | 1/N/1092:1099 | GNRA wlth tandem sheared | homologous HL_6PRV_002 HL_81538.2 | |
| HL_9GFT_174 | 1/N/1172:1177 | No text annotation | ||
| HL_9GFT_175 | 1/N/1222:1227 | GNRA | homologous HL_5J7L_164 HL_37824.7 | |
| HL_9GFT_176 | 1/N/1281:1289 | T-loop with 2 stacked bulged bases | homologous HL_5J7L_165 HL_28252.6 | |
| HL_9GFT_177 | 1/N/1324:1330 | Pseudoknot geometry with 3' bulge | homologous HL_5J7L_166 HL_57176.2 | |
| HL_9GFT_178 | 1/N/1363:1368 | GNRA | homologous HL_5J7L_167 HL_37824.7 | |
| HL_9GFT_179 | 1/N/1389:1398 | No text annotation | homologous HL_9DFE_034 HL_81545.2 | |
| HL_9GFT_180 | 1/N/1451:1459 | Mini UNCG with extended bulge | homologous HL_5J7L_169 HL_22622.1 | |
| HL_9GFT_181 | 1/N/1492:1498 | Pseudoknot geometry with 3' bulge | homologous HL_5J7L_170 HL_57176.2 | |
| HL_9GFT_182 | 1/N/1533:1538 | UNCG | homologous HL_5J7L_171 HL_34617.5 | |
| HL_9GFT_183 | 1/N/1565:1568 | Mini UNCG | homologous HL_9DFE_037 HL_48778.2 | |
| HL_9GFT_184 | 1/N/1612:1619 | No text annotation | homologous HL_4WF9_038 HL_89567.2 | |
| HL_9GFT_185 | 1/N/1630:1636 | GNRA | homologous HL_5J7L_174 HL_37824.7 | |
| HL_9GFT_186 | 1/N/1691:1696 | UNCG | homologous HL_9DFE_040 HL_34617.5 | |
| HL_9GFT_187 | 1/N/1728:1731 | No text annotation | geometric HL_1GID_008 NA | |
| HL_9GFT_188 | 1/N/1752:1756 | No text annotation | homologous HL_5J7L_177 HL_80709.3 | |
| HL_9GFT_189 | 1/N/1777:1787 | No text annotation | homologous HL_5J7L_178 HL_01962.2 | |
| HL_9GFT_190 | 1/N/1806:1811 | GNRA related | homologous HL_5J7L_179 HL_04783.2 | |
| HL_9GFT_191 | 1/N/1868:1873 | No text annotation | homologous HL_4WF9_045 NA | |
| HL_9GFT_192 | 1/N/1910:1920 | No text annotation | homologous HL_9DFE_046 HL_25847.2 | |
| HL_9GFT_193 | 1/N/1949:1957 | No text annotation | homologous HL_5J7L_182 HL_20167.2 | |
| HL_9GFT_194 | 1/N/2027:2036 | No text annotation | homologous HL_5J7L_183 HL_61996.2 | |
| HL_9GFT_195 | 1/N/2142:2149 | No text annotation | ||
| HL_9GFT_196 | 1/N/2209:2215 | No text annotation | homologous HL_4WF9_048 HL_49922.4 | |
| HL_9GFT_197 | 1/N/2248:2256 | No text annotation | homologous HL_4WF9_049 HL_85367.2 | |
| HL_9GFT_198 | 1/N/2264:2276 | No text annotation | homologous HL_5J7L_187 HL_91939.2 | |
| HL_9GFT_199 | 1/N/2304:2312 | No text annotation | homologous HL_5J7L_219 HL_50860.2 | |
| HL_9GFT_200 | 1/N/2324:2331 | Pseudoknot geometry | homologous HL_5J7L_189 HL_93324.4 | |
| HL_9GFT_201 | 1/N/2356:2361 | GNRA | homologous HL_5J7L_190 HL_37824.7 | |
| HL_9GFT_202 | 1/N/2374:2379 | GNRA | homologous HL_5J7L_191 HL_37824.7 | |
| HL_9GFT_203 | 1/N/2404:2413 | No text annotation | homologous HL_5J7L_192 HL_53454.2 | |
| HL_9GFT_204 | 1/N/2471:2479 | No text annotation | homologous HL_9DFE_058 HL_32735.2 | |
| HL_9GFT_205 | 1/N/2528:2535 | No text annotation | homologous HL_5J7L_194 HL_31585.3 | |
| HL_9GFT_206 | 1/N/2551:2557 | No text annotation | homologous HL_5J7L_195 HL_30068.2 | |
| HL_9GFT_207 | 1/N/2594:2599 | GNRA | homologous HL_7A0S_062 HL_37824.7 | |
| HL_9GFT_208 | 1/N/2658:2663 | GNRA | homologous HL_5J7L_197 HL_37824.7 | |
| HL_9GFT_209 | 1/N/2701:2706 | Ribsomal LSU H95 | homologous HL_5J7L_198 HL_65794.5 | |
| HL_9GFT_210 | 1/N/2745:2759 | No text annotation | homologous HL_4WF9_062 HL_74055.2 | |
| HL_9GFT_211 | 1/N/2796:2799 | No text annotation | geometric HL_5TBW_068 NA | |
| HL_9GFT_212 | 1/N/2819:2827 | No text annotation | homologous HL_5J7L_201 HL_64690.6 | |
| HL_9GFT_213 | 1/N/2856:2861 | GNRA | homologous HL_7A0S_068 HL_37824.7 | |
| HL_9GFT_214 | 1/O/34:48 | No text annotation | geometric HL_1MJI_004 HL_97756.2 | |
| HL_9GFT_215 | 1/O/38:44 | No text annotation | homologous HL_8C3A_073 NA | |
| HL_9GFT_216 | 1/O/86:90 | Mini UNCG | homologous HL_5J7L_204 HL_48778.2 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_9GFT_001 | 1/0/30:32, 1/0/552:553 | Single bulged G | homologous IL_5J7L_001 IL_00225.13 | |
| IL_9GFT_002 | 1/0/44:45, 1/0/396:398 | Single bulged A | homologous IL_5J7L_002 IL_31462.5 | |
| IL_9GFT_003 | 1/0/47:52, 1/0/359:361 | No text annotation | geometric IL_5J7L_003 IL_14177.2 | |
| IL_9GFT_004 | 1/0/54:56, 1/0/356:357 | Minor groove platform | homologous IL_4LFB_004 IL_51454.2 | |
| IL_9GFT_005 | 1/0/63:66, 1/0/103:104 | Multiple bulged bases | homologous IL_6CZR_117 NA | |
| IL_9GFT_006 | 1/0/67:69, 1/0/99:102 | Minor groove platform with extra cWW | homologous IL_5J7L_006 IL_90351.1 | |
| IL_9GFT_007 | 1/0/70:73, 1/0/97:98 | Minor groove platform | homologous IL_5J7L_007 IL_15052.4 | |
| IL_9GFT_008 | 1/0/75:76, 1/0/93:95 | Single bulged G | homologous IL_5J7L_395 IL_00225.13 | |
| IL_9GFT_009 | 1/0/128:131, 1/0/231:233 | Isolated non-canonical cWW pair | homologous IL_5J7L_009 IL_57744.1 | |
| IL_9GFT_010 | 1/0/132:136, 1/0/227:230 | No text annotation | homologous IL_4LFB_008 IL_64231.5 | |
| IL_9GFT_011 | 1/0/144:146, 1/0/176:178 | Isolated cWH basepair | homologous IL_5J7L_011 IL_10167.5 | |
| IL_9GFT_012 | 1/0/147:153, 1/0/168:175 | tWH-tWH-tHW-tHW | homologous IL_5J7L_012 IL_80604.6 | |
| IL_9GFT_013 | 1/0/203:206, 1/0/213:214 | Minor groove platform | geometric IL_3MXH_005 IL_15052.4 | |
| IL_9GFT_014 | 1/0/242:247, 1/0/277:284 | Kink-turn with non-sequential stacking | homologous IL_5J7L_014 IL_46174.3 | |
| IL_9GFT_015 | 1/0/249:252, 1/0/274:275 | No text annotation | homologous IL_6CZR_405 NA | |
| IL_9GFT_016 | 1/0/292:293, 1/0/304:308 | C-loop | homologous IL_4LFB_013 IL_03109.3 | |
| IL_9GFT_017 | 1/0/367:369, 1/0/392:393 | Single bulged U | homologous IL_5J7L_017 IL_89505.4 | |
| IL_9GFT_018 | 1/0/371:375, 1/0/389:390 | C-loop | homologous IL_6CZR_127 NA | |
| IL_9GFT_019 | 1/0/375:376, 1/0/387:389 | Single bulged G | homologous IL_5J7L_019 IL_00225.13 | |
| IL_9GFT_020 | 1/0/409:416, 1/0/427:433 | No text annotation | homologous IL_5J7L_020 IL_28026.3 | |
| IL_9GFT_021 | 1/0/440:442, 1/0/492:497 | No text annotation | ||
| IL_9GFT_022 | 1/0/446:450, 1/0/483:488 | tSH-tHW-tWW | homologous IL_5J7L_022 IL_88269.4 | |
| IL_9GFT_023 | 1/0/450:455, 1/0/477:483 | No text annotation | homologous IL_5J7L_023 IL_70801.1 | |
| IL_9GFT_024 | 1/0/504:511, 1/0/540:541 | SSU/LSU pseudoknot | homologous IL_4LFB_020 IL_41203.4 | |
| IL_9GFT_025 | 1/0/515:521, 1/0/528:536 | Kink-turn related | homologous IL_5J7L_025 IL_54177.4 | |
| IL_9GFT_026 | 1/0/569:575, 1/0/880:881 | No text annotation | homologous IL_5J7L_026 IL_38186.6 | |
| IL_9GFT_027 | 1/0/580:584, 1/0/757:761 | tSH-tHW-tHS | homologous IL_5J7L_027 IL_17136.7 | |
| IL_9GFT_028 | 1/0/594:596, 1/0/644:645 | Major groove platform | homologous IL_5J7L_028 IL_48076.6 | |
| IL_9GFT_029 | 1/0/597:598, 1/0/640:643 | Major groove minor groove platform; mini C-loop | homologous IL_4LFB_025 IL_68140.4 | |
| IL_9GFT_030 | 1/0/605:612, 1/0/628:633 | No text annotation | homologous IL_5J7L_030 IL_78349.3 | |
| IL_9GFT_031 | 1/0/654:655, 1/0/751:754 | Major groove platform; stack outside cWW | geometric IL_4LFB_027 IL_50694.7 | |
| IL_9GFT_032 | 1/0/658:659, 1/0/746:748 | Single stack bend | homologous IL_5J7L_032 IL_26793.1 | |
| IL_9GFT_033 | 1/0/662:666, 1/0/740:743 | Tandem non-canonical cWW pairs | homologous IL_5J7L_033 IL_85033.2 | |
| IL_9GFT_034 | 1/0/673:677, 1/0/713:717 | Triple non-canonical cWW pairs | homologous IL_4LFB_065 IL_49751.4 | |
| IL_9GFT_035 | 1/0/684:689, 1/0/698:706 | No text annotation | ||
| IL_9GFT_036 | 1/0/774:778, 1/0/804:805 | Left turn | homologous IL_5J7L_036 IL_29346.2 | |
| IL_9GFT_037 | 1/0/779:783, 1/0/799:803 | tSH-tHW-tHS | homologous IL_5J7L_037 IL_17136.7 | |
| IL_9GFT_038 | 1/0/887:894, 1/0/905:910 | 8x6 Sarcin-Ricin with inserted Y; G-bulge | homologous IL_5J7L_038 IL_41756.4 | |
| IL_9GFT_039 | 1/0/922:923, 1/0/1393:1395 | Single bulged A | homologous IL_5J7L_039 IL_31462.5 | |
| IL_9GFT_040 | 1/0/925:927, 1/0/1390:1391 | Single bulged G | homologous IL_4LFB_036 IL_00225.13 | |
| IL_9GFT_041 | 1/0/933:935, 1/0/1380:1384 | Minor groove platform | homologous IL_5J7L_041 IL_47078.3 | |
| IL_9GFT_042 | 1/0/953:954, 1/0/1226:1228 | No text annotation | homologous IL_6CZR_150 NA | |
| IL_9GFT_043 | 1/0/993:997, 1/0/1044:1045 | Minor groove platform | geometric IL_5J7L_043 IL_47078.3 | |
| IL_9GFT_044 | 1/0/998:999, 1/0/1041:1043 | Single stack bend | homologous IL_5J7L_044 IL_26793.1 | |
| IL_9GFT_045 | 1/0/1048:1050, 1/0/1208:1209 | Single bulged U | homologous IL_5J7L_046 IL_89505.4 | |
| IL_9GFT_046 | 1/0/1052:1056, 1/0/1204:1206 | Isolated cWS basepair | homologous IL_4LFB_044 IL_76319.5 | |
| IL_9GFT_047 | 1/0/1057:1058, 1/0/1199:1203 | Minor groove platform | homologous IL_4LFB_045 IL_95583.2 | |
| IL_9GFT_048 | 1/0/1060:1061, 1/0/1195:1197 | Single bulged A | homologous IL_5J7L_049 IL_31462.5 | |
| IL_9GFT_049 | 1/0/1061:1063, 1/0/1193:1195 | Isolated non-canonical cWW pair | homologous IL_5J7L_050 IL_28037.2 | |
| IL_9GFT_050 | 1/0/1124:1128, 1/0/1144:1149 | No text annotation | homologous IL_5J7L_051 IL_06691.1 | |
| IL_9GFT_051 | 1/0/1129:1132, 1/0/1142:1143 | Minor groove platform | homologous IL_5J7L_052 IL_15052.4 | |
| IL_9GFT_052 | 1/0/1158:1161, 1/0/1175:1181 | No text annotation | geometric IL_4LFB_050 IL_42032.1 | |
| IL_9GFT_053 | 1/0/1247:1253, 1/0/1284:1290 | No text annotation | homologous IL_5J7L_054 IL_09129.2 | |
| IL_9GFT_054 | 1/0/1255:1258, 1/0/1277:1282 | 180 degree turn | homologous IL_5J7L_055 IL_11344.2 | |
| IL_9GFT_055 | 1/0/1259:1263, 1/0/1272:1276 | Triple sheared | homologous IL_5J7L_056 IL_17948.2 | |
| IL_9GFT_056 | 1/0/1303:1308, 1/0/1329:1334 | No text annotation | homologous IL_5J7L_057 IL_85536.2 | |
| IL_9GFT_057 | 1/0/1399:1401, 1/0/1501:1504 | No text annotation | homologous IL_5J7L_058 IL_61438.4 | |
| IL_9GFT_058 | 1/0/1401:1404, 1/0/1497:1501 | No text annotation | homologous IL_4LFB_068 IL_65718.4 | |
| IL_9GFT_059 | 1/0/1405:1407, 1/0/1494:1496 | Isolated non-canonical cWW pair | homologous IL_5J7L_363 IL_87907.2 | |
| IL_9GFT_060 | 1/0/1407:1409, 1/0/1491:1494 | No text annotation | homologous IL_4LFB_070 IL_31531.3 | |
| IL_9GFT_061 | 1/0/1412:1414, 1/0/1486:1488 | Isolated non-canonical cWW pair | homologous IL_5J7L_061 IL_87907.2 | |
| IL_9GFT_062 | 1/0/1416:1419, 1/0/1481:1484 | Double sheared | homologous IL_5J7L_062 IL_09705.15 | |
| IL_9GFT_063 | 1/0/1430:1435, 1/0/1466:1470 | Triple sheared related | homologous IL_5J7L_063 IL_80231.1 | |
| IL_9GFT_064 | 1/0/1440:1442, 1/0/1460:1461 | Single bulged A | homologous IL_5J7L_064 IL_31462.5 | |
| IL_9GFT_065 | 1/0/1445:1448, 1/0/1455:1457 | No text annotation | homologous IL_5J7L_065 IL_31531.3 | |
| IL_9GFT_068 | 1/A3/51:53, 1/A3/63:65 | No text annotation | ||
| IL_9GFT_069 | 1/AA/30:32, 1/AA/552:553 | Single bulged G | homologous IL_4LFB_001 IL_00225.13 | |
| IL_9GFT_070 | 1/AA/44:45, 1/AA/396:398 | Single bulged A | homologous IL_5J7L_002 IL_31462.5 | |
| IL_9GFT_071 | 1/AA/47:52, 1/AA/359:361 | No text annotation | geometric IL_5J7L_003 IL_14177.2 | |
| IL_9GFT_072 | 1/AA/54:56, 1/AA/356:357 | Minor groove platform | homologous IL_4LFB_004 IL_51454.2 | |
| IL_9GFT_073 | 1/AA/63:66, 1/AA/103:104 | Multiple bulged bases | homologous IL_4LFB_005 IL_82107.4 | |
| IL_9GFT_074 | 1/AA/67:69, 1/AA/99:102 | Minor groove platform with extra cWW | homologous IL_5J7L_006 IL_90351.1 | |
| IL_9GFT_075 | 1/AA/70:73, 1/AA/97:98 | Minor groove platform | homologous IL_5J7L_007 IL_15052.4 | |
| IL_9GFT_076 | 1/AA/75:76, 1/AA/93:95 | Single bulged G | homologous IL_5J7L_395 IL_00225.13 | |
| IL_9GFT_077 | 1/AA/128:131, 1/AA/231:233 | Isolated non-canonical cWW pair | homologous IL_5J7L_009 IL_57744.1 | |
| IL_9GFT_078 | 1/AA/132:136, 1/AA/227:230 | Minor groove platform related | homologous IL_5J7L_010 IL_64231.5 | |
| IL_9GFT_079 | 1/AA/144:146, 1/AA/176:178 | Isolated cWH basepair | homologous IL_5J7L_011 IL_10167.5 | |
| IL_9GFT_080 | 1/AA/147:153, 1/AA/168:175 | tWH-tWH-tHW-tHW | homologous IL_5J7L_012 IL_80604.6 | |
| IL_9GFT_081 | 1/AA/203:206, 1/AA/213:214 | Minor groove platform | geometric IL_3MXH_005 IL_15052.4 | |
| IL_9GFT_082 | 1/AA/242:247, 1/AA/277:284 | Kink-turn with non-sequential stacking | homologous IL_5J7L_014 IL_46174.3 | |
| IL_9GFT_083 | 1/AA/249:252, 1/AA/274:275 | No text annotation | homologous IL_6CZR_405 NA | |
| IL_9GFT_084 | 1/AA/292:293, 1/AA/304:308 | C-loop | homologous IL_4LFB_013 IL_03109.3 | |
| IL_9GFT_085 | 1/AA/367:369, 1/AA/392:393 | Single bulged U | homologous IL_5J7L_017 IL_89505.4 | |
| IL_9GFT_086 | 1/AA/371:375, 1/AA/389:390 | C-loop | homologous IL_5J7L_018 IL_03109.3 | |
| IL_9GFT_087 | 1/AA/375:376, 1/AA/387:389 | Single bulged G | homologous IL_5J7L_019 IL_00225.13 | |
| IL_9GFT_088 | 1/AA/409:416, 1/AA/427:433 | No text annotation | homologous IL_5J7L_020 IL_28026.3 | |
| IL_9GFT_089 | 1/AA/440:442, 1/AA/492:497 | No text annotation | geometric IL_5J7L_021 IL_33323.1 | |
| IL_9GFT_090 | 1/AA/446:450, 1/AA/483:488 | tSH-tHW-tWW | homologous IL_5J7L_022 IL_88269.4 | |
| IL_9GFT_091 | 1/AA/450:455, 1/AA/477:483 | No text annotation | homologous IL_6CZR_406 NA | |
| IL_9GFT_092 | 1/AA/504:511, 1/AA/540:541 | SSU/LSU pseudoknot | homologous IL_4LFB_020 IL_41203.4 | |
| IL_9GFT_093 | 1/AA/515:521, 1/AA/528:536 | Kink-turn related | homologous IL_5J7L_025 IL_54177.4 | |
| IL_9GFT_094 | 1/AA/569:575, 1/AA/880:881 | No text annotation | homologous IL_5J7L_026 IL_38186.6 | |
| IL_9GFT_095 | 1/AA/580:584, 1/AA/757:761 | tSH-tHW-tHS | homologous IL_5J7L_027 IL_17136.7 | |
| IL_9GFT_096 | 1/AA/594:596, 1/AA/644:645 | Major groove platform | homologous IL_5J7L_028 IL_48076.6 | |
| IL_9GFT_097 | 1/AA/597:598, 1/AA/640:643 | Major groove minor groove platform; mini C-loop | homologous IL_4LFB_025 IL_68140.4 | |
| IL_9GFT_098 | 1/AA/605:612, 1/AA/628:633 | No text annotation | homologous IL_5J7L_030 IL_78349.3 | |
| IL_9GFT_099 | 1/AA/654:655, 1/AA/751:754 | Major groove platform; stack outside cWW | geometric IL_1KUQ_001 IL_50694.7 | |
| IL_9GFT_100 | 1/AA/659:660, 1/AA/745:747 | Single stack bend | homologous IL_5J7L_032 IL_26793.1 | |
| IL_9GFT_101 | 1/AA/662:666, 1/AA/740:743 | Tandem non-canonical cWW pairs | homologous IL_5J7L_033 IL_85033.2 | |
| IL_9GFT_102 | 1/AA/673:677, 1/AA/713:717 | Triple non-canonical cWW pairs | homologous IL_4LFB_065 IL_49751.4 | |
| IL_9GFT_103 | 1/AA/684:688, 1/AA/699:706 | Kink-turn | homologous IL_5J7L_035 IL_01488.3 | |
| IL_9GFT_104 | 1/AA/774:778, 1/AA/804:805 | Left turn | homologous IL_4LFB_032 IL_29346.2 | |
| IL_9GFT_105 | 1/AA/779:783, 1/AA/799:803 | tSH-tHW-tHS | homologous IL_5J7L_037 IL_17136.7 | |
| IL_9GFT_106 | 1/AA/887:894, 1/AA/905:910 | 8x6 Sarcin-Ricin with inserted Y; G-bulge | homologous IL_5J7L_038 IL_41756.4 | |
| IL_9GFT_107 | 1/AA/922:923, 1/AA/1393:1395 | Single bulged A | homologous IL_5J7L_039 IL_31462.5 | |
| IL_9GFT_108 | 1/AA/925:927, 1/AA/1390:1391 | Single bulged G | homologous IL_4LFB_036 IL_00225.13 | |
| IL_9GFT_109 | 1/AA/933:935, 1/AA/1380:1384 | Minor groove platform | homologous IL_5J7L_041 IL_47078.3 | |
| IL_9GFT_110 | 1/AA/953:954, 1/AA/1226:1228 | No text annotation | homologous IL_6CZR_150 NA | |
| IL_9GFT_111 | 1/AA/993:997, 1/AA/1044:1045 | Minor groove platform | geometric IL_5J7L_043 IL_47078.3 | |
| IL_9GFT_112 | 1/AA/998:999, 1/AA/1041:1043 | Single stack bend | homologous IL_5J7L_044 IL_26793.1 | |
| IL_9GFT_113 | 1/AA/1002:1027, 1/AA/1034:1038 | No text annotation | ||
| IL_9GFT_114 | 1/AA/1048:1050, 1/AA/1208:1209 | Single bulged U | homologous IL_5J7L_046 IL_89505.4 | |
| IL_9GFT_115 | 1/AA/1052:1056, 1/AA/1204:1206 | No text annotation | homologous IL_6CZR_154 NA | |
| IL_9GFT_116 | 1/AA/1057:1058, 1/AA/1199:1203 | Minor groove platform | homologous IL_4LFB_045 IL_95583.2 | |
| IL_9GFT_117 | 1/AA/1060:1061, 1/AA/1195:1197 | Single bulged A | homologous IL_5J7L_049 IL_31462.5 | |
| IL_9GFT_118 | 1/AA/1061:1063, 1/AA/1193:1195 | Isolated non-canonical cWW pair | homologous IL_4LFB_047 IL_28037.2 | |
| IL_9GFT_119 | 1/AA/1124:1128, 1/AA/1144:1149 | No text annotation | homologous IL_5J7L_051 IL_06691.1 | |
| IL_9GFT_120 | 1/AA/1129:1132, 1/AA/1142:1143 | Minor groove platform | homologous IL_5J7L_052 IL_15052.4 | |
| IL_9GFT_121 | 1/AA/1158:1161, 1/AA/1175:1181 | No text annotation | geometric IL_4LFB_050 IL_42032.1 | |
| IL_9GFT_122 | 1/AA/1247:1253, 1/AA/1284:1290 | No text annotation | homologous IL_5J7L_054 IL_09129.2 | |
| IL_9GFT_123 | 1/AA/1255:1258, 1/AA/1277:1282 | 180 degree turn | homologous IL_5J7L_055 IL_11344.2 | |
| IL_9GFT_124 | 1/AA/1259:1263, 1/AA/1272:1276 | Triple sheared | homologous IL_5J7L_056 IL_17948.2 | |
| IL_9GFT_125 | 1/AA/1303:1308, 1/AA/1329:1334 | No text annotation | homologous IL_5J7L_057 IL_85536.2 | |
| IL_9GFT_126 | 1/AA/1399:1401, 1/AA/1501:1504 | No text annotation | homologous IL_5J7L_058 IL_61438.4 | |
| IL_9GFT_127 | 1/AA/1401:1404, 1/AA/1497:1501 | No text annotation | homologous IL_5J7L_059 IL_65718.4 | |
| IL_9GFT_128 | 1/AA/1405:1407, 1/AA/1494:1496 | Isolated non-canonical cWW pair | homologous IL_5J7L_363 IL_87907.2 | |
| IL_9GFT_129 | 1/AA/1407:1409, 1/AA/1491:1494 | No text annotation | homologous IL_4LFB_070 IL_31531.3 | |
| IL_9GFT_130 | 1/AA/1412:1414, 1/AA/1486:1488 | Isolated non-canonical cWW pair | homologous IL_5J7L_061 IL_87907.2 | |
| IL_9GFT_131 | 1/AA/1416:1419, 1/AA/1481:1484 | Double sheared | homologous IL_6CZR_169 NA | |
| IL_9GFT_132 | 1/AA/1430:1435, 1/AA/1466:1470 | Triple sheared related | homologous IL_5J7L_063 IL_80231.1 | |
| IL_9GFT_133 | 1/AA/1440:1442, 1/AA/1460:1461 | Single bulged A | homologous IL_5J7L_064 IL_31462.5 | |
| IL_9GFT_134 | 1/AA/1445:1448, 1/AA/1455:1457 | No text annotation | homologous IL_5J7L_065 IL_31531.3 | |
| IL_9GFT_135 | 1/AV/24:30, 1/AV/510:516 | Triple sheared with non-canonical cWW | homologous IL_5J7L_245 IL_04021.2 | |
| IL_9GFT_136 | 1/AV/36:37, 1/AV/442:444 | Single bulged A | homologous IL_7A0S_002 IL_31462.5 | |
| IL_9GFT_137 | 1/AV/43:44, 1/AV/434:436 | Minor groove platform | homologous IL_5J7L_247 IL_51454.2 | |
| IL_9GFT_138 | 1/AV/81:85, 1/AV/97:105 | No text annotation | homologous IL_5J7L_248 IL_37015.1 | |
| IL_9GFT_139 | 1/AV/183:184, 1/AV/212:214 | Single stack bend | homologous IL_4WF9_007 IL_90729.1 | |
| IL_9GFT_140 | 1/AV/188:194, 1/AV/201:208 | 8x7 Sarcin-Ricin; G-bulge | homologous IL_5J7L_250 IL_04346.10 | |
| IL_9GFT_141 | 1/AV/239:245, 1/AV/253:258 | 7x6 Sarcin-Ricin; G-bulge | homologous IL_5J7L_251 IL_26307.2 | |
| IL_9GFT_142 | 1/AV/269:271, 1/AV/366:370 | No text annotation | ||
| IL_9GFT_143 | 1/AV/274:281, 1/AV/359:363 | No text annotation | homologous IL_5J7L_253 IL_77870.1 | |
| IL_9GFT_145 | 1/AV/293:295, 1/AV/343:347 | No text annotation | homologous IL_5J7L_254 IL_69440.3 | |
| IL_9GFT_146 | 1/AV/481:484, 1/AV/496:509 | No text annotation | geometric IL_5J7L_255 IL_81516.2 | |
| IL_9GFT_147 | 1/AV/536:539, 1/AV/554:557 | Double sheared | homologous IL_5J7L_256 IL_09705.15 | |
| IL_9GFT_148 | 1/AV/564:566, 1/AV/575:577 | Isolated non-canonical cWW pair | homologous IL_4WF9_017 IL_07785.1 | |
| IL_9GFT_149 | 1/AV/606:610, 1/AV/618:622 | AAA cross-strand stack | homologous IL_5J7L_258 IL_66798.2 | |
| IL_9GFT_150 | 1/AV/672:674, 1/AV/806:808 | Isolated non-canonical cWW pair | homologous IL_5J7L_259 IL_87907.2 | |
| IL_9GFT_151 | 1/AV/674:678, 1/AV/799:806 | tHW-tHW cross-strand stack | homologous IL_5J7L_260 IL_54041.2 | |
| IL_9GFT_152 | 1/AV/697:698, 1/AV/763:765 | Single bulged A | homologous IL_5J7L_261 IL_31462.5 | |
| IL_9GFT_153 | 1/AV/702:703, 1/AV/728:730 | Single bulged G | homologous IL_7A0S_017 IL_00225.13 | |
| IL_9GFT_154 | 1/AV/703:707, 1/AV/724:728 | No text annotation | homologous IL_9DFE_019 IL_50730.2 | |
| IL_9GFT_155 | 1/AV/738:740, 1/AV/757:758 | Major groove platform | homologous IL_5J7L_264 IL_48076.6 | |
| IL_9GFT_156 | 1/AV/775:777, 1/AV/787:791 | Multiple bulged bases | geometric IL_7A0S_021 IL_06549.2 | |
| IL_9GFT_157 | 1/AV/837:838, 1/AV/940:942 | Single stack bend | homologous IL_7A0S_022 IL_90729.1 | |
| IL_9GFT_158 | 1/AV/844:847, 1/AV/933:934 | Other IL | homologous IL_5J7L_267 IL_90729.1 | |
| IL_9GFT_159 | 1/AV/847:848, 1/AV/930:933 | Stack outside cWW | homologous IL_5J7L_268 IL_56987.1 | |
| IL_9GFT_160 | 1/AV/850:851, 1/AV/926:928 | Single stack bend | homologous IL_5J7L_269 IL_26793.1 | |
| IL_9GFT_161 | 1/AV/856:864, 1/AV/912:921 | No text annotation | ||
| IL_9GFT_162 | 1/AV/864:868, 1/AV/909:912 | C-loop | homologous IL_5J7L_272 IL_26222.2 | |
| IL_9GFT_163 | 1/AV/870:872, 1/AV/905:907 | Isolated non-canonical cWW pair | homologous IL_5J7L_273 IL_28037.2 | |
| IL_9GFT_164 | 1/AV/875:879, 1/AV/898:902 | Triple sheared | homologous IL_5J7L_274 IL_17948.2 | |
| IL_9GFT_165 | 1/AV/880:881, 1/AV/895:897 | No text annotation | homologous IL_5J7L_275 NA | |
| IL_9GFT_166 | 1/AV/994:996, 1/AV/1159:1160 | Single bulged C | homologous IL_4WF9_035 IL_61258.15 | |
| IL_9GFT_167 | 1/AV/998:1002, 1/AV/1153:1157 | UAA/GAN | homologous IL_5J7L_277 IL_38507.2 | |
| IL_9GFT_168 | 1/AV/1004:1011, 1/AV/1150:1151 | SSU/LSU pseudoknot | homologous IL_4WF9_037 IL_41203.4 | |
| IL_9GFT_169 | 1/AV/1011:1013, 1/AV/1149:1150 | Single bulged U | homologous IL_5J7L_279 IL_89505.4 | |
| IL_9GFT_170 | 1/AV/1018:1024, 1/AV/1140:1144 | Kink-turn related | homologous IL_4WF9_039 IL_57188.5 | |
| IL_9GFT_171 | 1/AV/1024:1030, 1/AV/1124:1140 | No text annotation | homologous IL_5J7L_281 IL_50715.3 | |
| IL_9GFT_172 | 1/AV/1031:1034, 1/AV/1121:1123 | Isolated non-canonical cWW pair | homologous IL_5J7L_282 IL_57744.1 | |
| IL_9GFT_173 | 1/AV/1038:1041, 1/AV/1114:1117 | Tandem non-canonical cWW pairs | homologous IL_5J7L_283 IL_85033.2 | |
| IL_9GFT_174 | 1/AV/1043:1051, 1/AV/1108:1112 | No text annotation | ||
| IL_9GFT_175 | 1/AV/1059:1062, 1/AV/1076:1079 | No text annotation | homologous IL_5J7L_285 IL_92446.2 | |
| IL_9GFT_176 | 1/AV/1087:1090, 1/AV/1101:1102 | Major groove platform | homologous IL_5J7L_385 IL_48076.6 | |
| IL_9GFT_177 | 1/AV/1196:1198, 1/AV/1247:1250 | Isolated cWS basepair | homologous IL_4WF9_044 IL_42997.3 | |
| IL_9GFT_178 | 1/AV/1202:1206, 1/AV/1240:1243 | No text annotation | homologous IL_5J7L_287 IL_91920.1 | |
| IL_9GFT_179 | 1/AV/1208:1215, 1/AV/1234:1238 | Kink-turn | homologous IL_5J7L_288 IL_70923.9 | |
| IL_9GFT_180 | 1/AV/1262:1269, 1/AV/2011:2017 | 8x7 Sarcin-Ricin; G-bulge | homologous IL_5J7L_289 IL_04346.10 | |
| IL_9GFT_181 | 1/AV/1310:1313, 1/AV/1603:1604 | Major groove platform; stack outside cWW | geometric IL_4V9F_008 IL_50694.7 | |
| IL_9GFT_182 | 1/AV/1319:1323, 1/AV/1331:1333 | C-loop | homologous IL_5J7L_291 IL_63596.11 | |
| IL_9GFT_183 | 1/AV/1351:1355, 1/AV/1376:1380 | UAA/GAN | homologous IL_5J7L_292 IL_89021.2 | |
| IL_9GFT_184 | 1/AV/1357:1361, 1/AV/1370:1374 | tSH-tHW-tHS | homologous IL_5J7L_293 IL_17136.7 | |
| IL_9GFT_185 | 1/AV/1415:1416, 1/AV/1582:1587 | No text annotation | homologous IL_5J7L_294 IL_87211.1 | |
| IL_9GFT_186 | 1/AV/1417:1421, 1/AV/1577:1581 | UAA/GAN | homologous IL_5J7L_295 IL_38507.2 | |
| IL_9GFT_187 | 1/AV/1432:1435, 1/AV/1557:1561 | Tandem non-canonical cWW pairs | homologous IL_5J7L_296 IL_58112.2 | |
| IL_9GFT_188 | 1/AV/1437:1440, 1/AV/1551:1555 | tSH-tHW | homologous IL_5J7L_297 IL_99646.2 | |
| IL_9GFT_189 | 1/AV/1450:1451, 1/AV/1459:1461 | Single bulged U | homologous IL_5J7L_298 IL_89505.4 | |
| IL_9GFT_190 | 1/AV/1468:1471, 1/AV/1520:1524 | No text annotation | homologous IL_5J7L_299 IL_68574.4 | |
| IL_9GFT_191 | 1/AV/1474:1478, 1/AV/1513:1517 | tSH-tHW-tHS | homologous IL_5J7L_300 IL_38862.4 | |
| IL_9GFT_192 | 1/AV/1481:1482, 1/AV/1507:1510 | 180 degree turn | homologous IL_5J7L_301 IL_00881.1 | |
| IL_9GFT_193 | 1/AV/1489:1491, 1/AV/1499:1500 | Single bulged A | homologous IL_5J7L_302 IL_31462.5 | |
| IL_9GFT_194 | 1/AV/1526:1529, 1/AV/1542:1546 | UAA/GAN variation | homologous IL_5J7L_303 IL_23774.1 | |
| IL_9GFT_195 | 1/AV/1651:1656, 1/AV/2004:2006 | No text annotation | homologous IL_5J7L_304 IL_12566.4 | |
| IL_9GFT_196 | 1/AV/1663:1665, 1/AV/1995:1997 | Isolated tWW turn | homologous IL_4WF9_063 IL_67095.2 | |
| IL_9GFT_197 | 1/AV/1666:1669, 1/AV/1993:1994 | Major groove platform; stack outside cWW | geometric IL_8C3A_082 NA | |
| IL_9GFT_198 | 1/AV/1666:1674, 1/AV/1990:1994 | No text annotation | geometric IL_4WF9_117 IL_22854.4 | |
| IL_9GFT_199 | 1/AV/1669:1674, 1/AV/1990:1993 | Intercalated tWH | homologous IL_4WF9_065 IL_76758.2 | |
| IL_9GFT_200 | 1/AV/1686:1691, 1/AV/1696:1702 | tSH-tSH-tHH-tHS | homologous IL_5J7L_308 IL_47346.2 | |
| IL_9GFT_201 | 1/AV/1712:1718, 1/AV/1742:1746 | 6x5 Sarcin-Ricin; G-bulge | homologous IL_5J7L_309 IL_88269.4 | |
| IL_9GFT_202 | 1/AV/1720:1724, 1/AV/1736:1740 | Triple sheared | homologous IL_5J7L_310 IL_50730.2 | |
| IL_9GFT_203 | 1/AV/1770:1771, 1/AV/1980:1982 | Single bulged A | homologous IL_5J7L_312 IL_31462.5 | |
| IL_9GFT_204 | 1/AV/1798:1804, 1/AV/1813:1821 | Kink-turn related | homologous IL_5J7L_313 IL_17069.5 | |
| IL_9GFT_205 | 1/AV/1837:1840, 1/AV/1902:1903 | Minor groove platform, major groove intercalation | homologous IL_5J7L_314 IL_95583.2 | |
| IL_9GFT_206 | 1/AV/1841:1842, 1/AV/1898:1901 | Major groove intercalation | homologous IL_5J7L_315 IL_82107.4 | |
| IL_9GFT_207 | 1/AV/1846:1849, 1/AV/1893:1894 | Major groove minor groove platform; mini C-loop | homologous IL_5J7L_316 IL_68140.4 | |
| IL_9GFT_208 | 1/AV/1851:1860, 1/AV/1882:1891 | No text annotation | homologous IL_5J7L_387 IL_61249.1 | |
| IL_9GFT_209 | 1/AV/1864:1867, 1/AV/1874:1878 | UAA/GAN variation | homologous IL_5J7L_317 IL_77691.5 | |
| IL_9GFT_210 | 1/AV/1933:1934, 1/AV/1964:1967 | No text annotation | geometric IL_8VTW_075 NA | |
| IL_9GFT_211 | 1/AV/1934:1945, 1/AV/1961:1964 | No text annotation | homologous IL_7A0S_072 IL_04332.3 | |
| IL_9GFT_212 | 1/AV/2050:2052, 1/AV/2617:2618 | Major groove platform | homologous IL_5J7L_320 IL_48076.6 | |
| IL_9GFT_213 | 1/AV/2054:2056, 1/AV/2612:2615 | No text annotation | homologous IL_5J7L_321 IL_83389.2 | |
| IL_9GFT_214 | 1/AV/2067:2069, 1/AV/2442:2443 | Single bulged U | homologous IL_7A0S_075 IL_89505.4 | |
| IL_9GFT_215 | 1/AV/2070:2071, 1/AV/2438:2441 | Minor groove platform | homologous IL_4WF9_081 IL_51454.2 | |
| IL_9GFT_216 | 1/AV/2081:2083, 1/AV/2236:2239 | Isolated tHS basepair with bulges | homologous IL_5J7L_325 IL_85599.2 | |
| IL_9GFT_217 | 1/AV/2085:2087, 1/AV/2232:2234 | Isolated non-canonical cWW pair | homologous IL_5J7L_326 IL_28037.2 | |
| IL_9GFT_219 | 1/AV/2103:2106, 1/AV/2184:2186 | No text annotation | ||
| IL_9GFT_220 | 1/AV/2106:2107, 1/AV/2182:2184 | No text annotation | ||
| IL_9GFT_221 | 1/AV/2108:2120, 1/AV/2178:2181 | No text annotation | ||
| IL_9GFT_222 | 1/AV/2124:2127, 1/AV/2161:2174 | No text annotation | ||
| IL_9GFT_223 | 1/AV/2129:2138, 1/AV/2153:2159 | No text annotation | ||
| IL_9GFT_224 | 1/AV/2202:2204, 1/AV/2220:2221 | Single bulged U | homologous IL_5J7L_331 IL_89505.4 | |
| IL_9GFT_225 | 1/AV/2350:2353, 1/AV/2364:2367 | Double sheared | homologous IL_4WF9_087 IL_09705.15 | |
| IL_9GFT_226 | 1/AV/2401:2403, 1/AV/2414:2415 | No text annotation | ||
| IL_9GFT_227 | 1/AV/2453:2454, 1/AV/2498:2500 | Single stack bend | homologous IL_4WF9_089 IL_26793.1 | |
| IL_9GFT_228 | 1/AV/2454:2455, 1/AV/2496:2498 | Major groove platform | homologous IL_4WF9_090 IL_48076.6 | |
| IL_9GFT_229 | 1/AV/2457:2459, 1/AV/2493:2494 | Major groove platform | homologous IL_7A0S_085 IL_48076.6 | |
| IL_9GFT_230 | 1/AV/2459:2461, 1/AV/2489:2493 | Major groove minor groove platform with extra cWW | homologous IL_4WF9_092 IL_51387.2 | |
| IL_9GFT_231 | 1/AV/2466:2470, 1/AV/2480:2484 | Triple sheared | homologous IL_5J7L_338 IL_17948.2 | |
| IL_9GFT_232 | 1/AV/2507:2508, 1/AV/2580:2582 | Major groove platform | homologous IL_4WF9_094 IL_07039.3 | |
| IL_9GFT_233 | 1/AV/2510:2512, 1/AV/2574:2578 | Isolated non-canonical cWW with bulges | homologous IL_5J7L_340 IL_07785.1 | |
| IL_9GFT_234 | 1/AV/2512:2513, 1/AV/2571:2574 | No text annotation | homologous IL_5J7L_341 IL_42626.2 | |
| IL_9GFT_235 | 1/AV/2522:2523, 1/AV/2540:2543 | Major groove platform with intercalation | homologous IL_7A0S_091 IL_02555.1 | |
| IL_9GFT_236 | 1/AV/2591:2592, 1/AV/2601:2603 | Single bulged A | homologous IL_5J7L_344 IL_31462.5 | |
| IL_9GFT_237 | 1/AV/2636:2640, 1/AV/2774:2782 | tSH-tHS-tHW | homologous IL_5J7L_345 IL_04638.3 | |
| IL_9GFT_238 | 1/AV/2652:2658, 1/AV/2663:2668 | Sarcin-Ricin target in LSU H95; G-bulge | homologous IL_5J7L_346 IL_16458.4 | |
| IL_9GFT_239 | 1/AV/2680:2684, 1/AV/2725:2727 | C-loop | homologous IL_5J7L_347 IL_63596.11 | |
| IL_9GFT_240 | 1/AV/2687:2691, 1/AV/2718:2722 | No text annotation | homologous IL_5J7L_348 IL_23774.1 | |
| IL_9GFT_241 | 1/AV/2695:2696, 1/AV/2711:2714 | Multiple bulged bases | homologous IL_5J7L_349 IL_42626.2 | |
| IL_9GFT_242 | 1/AV/2737:2742, 1/AV/2762:2767 | UAA/GAN with extra cWW | homologous IL_7A0S_098 IL_49767.8 | |
| IL_9GFT_243 | 1/AV/2795:2796, 1/AV/2799:2801 | Single bulged A | geometric IL_8VTW_018 NA | |
| IL_9GFT_244 | 1/AV/2806:2811, 1/AV/2889:2892 | No text annotation | homologous IL_5J7L_351 IL_29471.1 | |
| IL_9GFT_245 | 1/AV/2838:2839, 1/AV/2878:2880 | Major groove intercalation | homologous IL_4WF9_106 IL_66635.5 | |
| IL_9GFT_246 | 1/AV/2843:2846, 1/AV/2870:2874 | Multiple bulged bases with non-canonical cWW | homologous IL_5J7L_353 IL_64231.5 | |
| IL_9GFT_247 | 1/AV/2847:2852, 1/AV/2865:2869 | tHS double platform | homologous IL_5J7L_354 IL_70411.2 | |
| IL_9GFT_248 | 1/AW/17:18, 1/AW/65:67 | Major groove intercalation | homologous IL_5J7L_355 IL_31462.5 | |
| IL_9GFT_249 | 1/AW/23:28, 1/AW/56:60 | No text annotation | homologous IL_9DFE_111 IL_18472.4 | |
| IL_9GFT_250 | 1/AW/30:31, 1/AW/51:54 | Major groove minor groove platform; mini C-loop | homologous IL_5J7L_357 IL_68140.4 | |
| IL_9GFT_251 | 1/AW/34:38, 1/AW/44:48 | Symmetric double minor groove platform | homologous IL_5J7L_358 IL_58103.11 | |
| IL_9GFT_252 | 1/AW/71:79, 1/AW/97:105 | Bacterial 5S Loop E | homologous IL_5J7L_359 IL_56455.6 | |
| IL_9GFT_253 | 1/N/24:30, 1/N/510:516 | Triple sheared with non-canonical cWW | homologous IL_5J7L_245 IL_04021.2 | |
| IL_9GFT_254 | 1/N/36:37, 1/N/442:444 | Single bulged A | homologous IL_9DFE_002 IL_31462.5 | |
| IL_9GFT_255 | 1/N/43:44, 1/N/434:436 | Minor groove platform | homologous IL_5J7L_247 IL_51454.2 | |
| IL_9GFT_256 | 1/N/81:85, 1/N/97:105 | No text annotation | homologous IL_5J7L_248 IL_37015.1 | |
| IL_9GFT_257 | 1/N/183:184, 1/N/212:214 | Single stack bend | homologous IL_7A0S_005 IL_90729.1 | |
| IL_9GFT_258 | 1/N/188:194, 1/N/201:208 | 8x7 Sarcin-Ricin; G-bulge | homologous IL_5J7L_250 IL_04346.10 | |
| IL_9GFT_259 | 1/N/239:245, 1/N/253:258 | 7x6 Sarcin-Ricin; G-bulge | homologous IL_5J7L_251 IL_26307.2 | |
| IL_9GFT_260 | 1/N/269:271, 1/N/366:370 | No text annotation | homologous IL_5J7L_252 IL_47972.1 | |
| IL_9GFT_261 | 1/N/274:281, 1/N/359:363 | No text annotation | homologous IL_5J7L_253 IL_77870.1 | |
| IL_9GFT_262 | 1/N/293:295, 1/N/343:347 | No text annotation | homologous IL_5J7L_254 IL_69440.3 | |
| IL_9GFT_263 | 1/N/481:484, 1/N/496:509 | No text annotation | geometric IL_5J7L_255 IL_81516.2 | |
| IL_9GFT_264 | 1/N/536:539, 1/N/554:557 | Double sheared | homologous IL_5J7L_256 IL_09705.15 | |
| IL_9GFT_265 | 1/N/564:566, 1/N/575:577 | Isolated non-canonical cWW pair | homologous IL_4WF9_017 IL_07785.1 | |
| IL_9GFT_266 | 1/N/606:610, 1/N/618:622 | AAA cross-strand stack | homologous IL_5J7L_258 IL_66798.2 | |
| IL_9GFT_267 | 1/N/672:674, 1/N/806:808 | Isolated non-canonical cWW pair | homologous IL_5J7L_259 IL_87907.2 | |
| IL_9GFT_268 | 1/N/674:678, 1/N/799:806 | tHW-tHW cross-strand stack | homologous IL_5J7L_260 IL_54041.2 | |
| IL_9GFT_269 | 1/N/697:698, 1/N/763:765 | Single bulged A | homologous IL_5J7L_261 IL_31462.5 | |
| IL_9GFT_270 | 1/N/702:703, 1/N/728:730 | Single bulged G | homologous IL_5J7L_262 IL_00225.13 | |
| IL_9GFT_271 | 1/N/703:707, 1/N/724:728 | No text annotation | homologous IL_9DFE_019 IL_50730.2 | |
| IL_9GFT_272 | 1/N/738:740, 1/N/757:758 | Major groove platform | homologous IL_5J7L_264 IL_48076.6 | |
| IL_9GFT_273 | 1/N/775:777, 1/N/787:791 | Multiple bulged bases | geometric IL_7A0S_021 IL_06549.2 | |
| IL_9GFT_274 | 1/N/844:847, 1/N/933:934 | Other IL | geometric IL_5J7L_267 IL_90729.1 | |
| IL_9GFT_275 | 1/N/844:848, 1/N/930:934 | No text annotation | homologous IL_5J7L_399 IL_96236.1 | |
| IL_9GFT_276 | 1/N/847:848, 1/N/930:933 | Stack outside cWW | homologous IL_5J7L_268 IL_56987.1 | |
| IL_9GFT_277 | 1/N/850:851, 1/N/926:928 | Single stack bend | homologous IL_5J7L_269 IL_26793.1 | |
| IL_9GFT_278 | 1/N/856:862, 1/N/915:921 | 7x7 Sarcin-Ricin with intercalated A; G-bulge | homologous IL_5J7L_270 IL_29198.2 | |
| IL_9GFT_279 | 1/N/862:863, 1/N/913:915 | Single bulged G | homologous IL_5J7L_271 IL_00225.13 | |
| IL_9GFT_280 | 1/N/864:868, 1/N/909:912 | C-loop | homologous IL_5J7L_272 IL_26222.2 | |
| IL_9GFT_281 | 1/N/870:872, 1/N/905:907 | Isolated non-canonical cWW pair | homologous IL_5J7L_273 IL_28037.2 | |
| IL_9GFT_282 | 1/N/875:879, 1/N/898:902 | Triple sheared | homologous IL_5J7L_274 IL_17948.2 | |
| IL_9GFT_283 | 1/N/880:881, 1/N/895:897 | No text annotation | ||
| IL_9GFT_284 | 1/N/994:996, 1/N/1159:1160 | Single bulged C | homologous IL_5J7L_276 IL_61258.15 | |
| IL_9GFT_285 | 1/N/998:1002, 1/N/1153:1157 | UAA/GAN | homologous IL_7A0S_033 IL_38507.2 | |
| IL_9GFT_286 | 1/N/1004:1011, 1/N/1150:1151 | SSU/LSU pseudoknot | homologous IL_4WF9_037 IL_41203.4 | |
| IL_9GFT_287 | 1/N/1011:1013, 1/N/1149:1150 | Single bulged U | homologous IL_4WF9_038 IL_89505.4 | |
| IL_9GFT_288 | 1/N/1018:1024, 1/N/1140:1144 | Kink-turn related | homologous IL_4WF9_039 IL_57188.5 | |
| IL_9GFT_289 | 1/N/1024:1030, 1/N/1124:1140 | No text annotation | homologous IL_5J7L_281 IL_50715.3 | |
| IL_9GFT_290 | 1/N/1031:1034, 1/N/1121:1123 | Isolated non-canonical cWW pair | homologous IL_5J7L_282 IL_57744.1 | |
| IL_9GFT_291 | 1/N/1038:1041, 1/N/1114:1117 | Tandem non-canonical cWW pairs | homologous IL_5J7L_283 IL_85033.2 | |
| IL_9GFT_292 | 1/N/1043:1051, 1/N/1108:1112 | Kink-turn | homologous IL_5J7L_284 IL_99692.2 | |
| IL_9GFT_293 | 1/N/1059:1062, 1/N/1076:1079 | No text annotation | homologous IL_6PRV_001 IL_92446.2 | |
| IL_9GFT_294 | 1/N/1196:1198, 1/N/1247:1250 | Isolated cWS basepair | homologous IL_4WF9_044 IL_42997.3 | |
| IL_9GFT_295 | 1/N/1202:1206, 1/N/1240:1243 | No text annotation | homologous IL_5J7L_287 IL_91920.1 | |
| IL_9GFT_296 | 1/N/1208:1215, 1/N/1234:1238 | Kink-turn | homologous IL_5J7L_288 IL_70923.9 | |
| IL_9GFT_297 | 1/N/1262:1269, 1/N/2011:2017 | 8x7 Sarcin-Ricin; G-bulge | homologous IL_5J7L_289 IL_04346.10 | |
| IL_9GFT_298 | 1/N/1310:1313, 1/N/1603:1604 | Major groove platform; stack outside cWW | geometric IL_4WF9_049 IL_50694.7 | |
| IL_9GFT_299 | 1/N/1319:1323, 1/N/1331:1333 | C-loop | homologous IL_5J7L_291 IL_63596.11 | |
| IL_9GFT_300 | 1/N/1351:1355, 1/N/1376:1380 | UAA/GAN | homologous IL_5J7L_292 IL_89021.2 | |
| IL_9GFT_301 | 1/N/1357:1361, 1/N/1370:1374 | tSH-tHW-tHS | homologous IL_5J7L_293 IL_17136.7 | |
| IL_9GFT_302 | 1/N/1415:1416, 1/N/1582:1587 | No text annotation | homologous IL_5J7L_294 IL_87211.1 | |
| IL_9GFT_303 | 1/N/1417:1421, 1/N/1577:1581 | UAA/GAN | homologous IL_5J7L_295 IL_38507.2 | |
| IL_9GFT_304 | 1/N/1432:1435, 1/N/1557:1561 | Tandem non-canonical cWW pairs | homologous IL_5J7L_296 IL_58112.2 | |
| IL_9GFT_305 | 1/N/1437:1440, 1/N/1551:1555 | tSH-tHW | homologous IL_5J7L_297 IL_99646.2 | |
| IL_9GFT_306 | 1/N/1450:1451, 1/N/1459:1461 | Single bulged U | homologous IL_5J7L_298 IL_89505.4 | |
| IL_9GFT_307 | 1/N/1468:1471, 1/N/1520:1524 | No text annotation | homologous IL_5J7L_299 IL_68574.4 | |
| IL_9GFT_308 | 1/N/1474:1478, 1/N/1513:1517 | tSH-tHW-tHS | homologous IL_5J7L_300 IL_38862.4 | |
| IL_9GFT_309 | 1/N/1481:1482, 1/N/1507:1510 | 180 degree turn | homologous IL_5J7L_301 IL_00881.1 | |
| IL_9GFT_310 | 1/N/1489:1491, 1/N/1499:1500 | Single bulged A | homologous IL_5J7L_302 IL_31462.5 | |
| IL_9GFT_311 | 1/N/1526:1529, 1/N/1542:1546 | UAA/GAN variation | homologous IL_5J7L_303 IL_23774.1 | |
| IL_9GFT_312 | 1/N/1651:1656, 1/N/2004:2006 | No text annotation | homologous IL_5J7L_304 IL_12566.4 | |
| IL_9GFT_313 | 1/N/1663:1665, 1/N/1995:1997 | Isolated tWW turn | homologous IL_5J7L_305 IL_67095.2 | |
| IL_9GFT_314 | 1/N/1666:1669, 1/N/1993:1994 | Major groove platform; stack outside cWW | geometric IL_8C3A_082 NA | |
| IL_9GFT_315 | 1/N/1666:1674, 1/N/1990:1994 | No text annotation | geometric IL_4WF9_117 IL_22854.4 | |
| IL_9GFT_316 | 1/N/1669:1674, 1/N/1990:1993 | Intercalated tWH | homologous IL_4WF9_065 IL_76758.2 | |
| IL_9GFT_317 | 1/N/1686:1691, 1/N/1696:1702 | tSH-tSH-tHH-tHS | homologous IL_5J7L_308 IL_47346.2 | |
| IL_9GFT_318 | 1/N/1712:1718, 1/N/1742:1746 | 6x5 Sarcin-Ricin; G-bulge | homologous IL_5J7L_309 IL_88269.4 | |
| IL_9GFT_319 | 1/N/1720:1724, 1/N/1736:1740 | Triple sheared | homologous IL_5J7L_310 IL_50730.2 | |
| IL_9GFT_320 | 1/N/1727:1728, 1/N/1731:1733 | Single bulged C | homologous IL_5J7L_311 IL_61258.15 | |
| IL_9GFT_321 | 1/N/1770:1771, 1/N/1980:1982 | Single bulged A | homologous IL_4WF9_068 IL_31462.5 | |
| IL_9GFT_322 | 1/N/1798:1804, 1/N/1813:1821 | Kink-turn related | homologous IL_5J7L_313 IL_17069.5 | |
| IL_9GFT_323 | 1/N/1837:1840, 1/N/1902:1903 | Minor groove platform, major groove intercalation | homologous IL_5J7L_314 IL_95583.2 | |
| IL_9GFT_324 | 1/N/1841:1842, 1/N/1898:1901 | Major groove intercalation | homologous IL_5J7L_315 IL_82107.4 | |
| IL_9GFT_325 | 1/N/1846:1849, 1/N/1893:1894 | Major groove minor groove platform; mini C-loop | homologous IL_5J7L_316 IL_68140.4 | |
| IL_9GFT_326 | 1/N/1851:1860, 1/N/1882:1891 | No text annotation | homologous IL_5J7L_387 IL_61249.1 | |
| IL_9GFT_327 | 1/N/1864:1867, 1/N/1874:1878 | UAA/GAN variation | homologous IL_5J7L_317 IL_77691.5 | |
| IL_9GFT_328 | 1/N/1933:1934, 1/N/1964:1967 | No text annotation | geometric IL_8VTW_075 NA | |
| IL_9GFT_329 | 1/N/1934:1945, 1/N/1961:1964 | No text annotation | homologous IL_7A0S_072 IL_04332.3 | |
| IL_9GFT_330 | 1/N/2050:2052, 1/N/2617:2618 | Major groove platform | homologous IL_9DFE_078 IL_48076.6 | |
| IL_9GFT_331 | 1/N/2054:2056, 1/N/2612:2615 | No text annotation | homologous IL_4WF9_079 IL_83389.2 | |
| IL_9GFT_332 | 1/N/2067:2069, 1/N/2442:2443 | Single bulged U | homologous IL_5J7L_388 IL_89505.4 | |
| IL_9GFT_333 | 1/N/2070:2071, 1/N/2438:2441 | Minor groove platform | homologous IL_4WF9_081 IL_51454.2 | |
| IL_9GFT_334 | 1/N/2081:2083, 1/N/2236:2239 | Isolated tHS basepair with bulges | homologous IL_5J7L_325 IL_85599.2 | |
| IL_9GFT_335 | 1/N/2085:2087, 1/N/2232:2234 | Isolated non-canonical cWW pair | homologous IL_5J7L_326 IL_28037.2 | |
| IL_9GFT_336 | 1/N/2103:2105, 1/N/2184:2186 | Isolated non-canonical cWW pair | geometric IL_4LFB_010 IL_87907.2 | |
| IL_9GFT_337 | 1/N/2106:2120, 1/N/2178:2183 | No text annotation | ||
| IL_9GFT_338 | 1/N/2121:2127, 1/N/2161:2177 | No text annotation | ||
| IL_9GFT_339 | 1/N/2128:2136, 1/N/2155:2160 | No text annotation | ||
| IL_9GFT_340 | 1/N/2202:2204, 1/N/2220:2221 | Single bulged U | homologous IL_5J7L_331 IL_89505.4 | |
| IL_9GFT_341 | 1/N/2350:2353, 1/N/2364:2367 | Double sheared | homologous IL_4WF9_087 IL_09705.15 | |
| IL_9GFT_342 | 1/N/2401:2403, 1/N/2414:2415 | No text annotation | ||
| IL_9GFT_343 | 1/N/2453:2454, 1/N/2498:2500 | Single stack bend | homologous IL_4WF9_089 IL_26793.1 | |
| IL_9GFT_344 | 1/N/2454:2455, 1/N/2496:2498 | Major groove platform | homologous IL_4WF9_090 IL_48076.6 | |
| IL_9GFT_345 | 1/N/2457:2459, 1/N/2493:2494 | Major groove platform | homologous IL_9DFE_093 IL_48076.6 | |
| IL_9GFT_346 | 1/N/2459:2461, 1/N/2489:2493 | No text annotation | homologous IL_9DFE_094 IL_51387.2 | |
| IL_9GFT_347 | 1/N/2466:2470, 1/N/2480:2484 | Triple sheared | homologous IL_5J7L_338 IL_17948.2 | |
| IL_9GFT_348 | 1/N/2507:2508, 1/N/2580:2582 | Major groove platform | homologous IL_7A0S_088 IL_07039.3 | |
| IL_9GFT_349 | 1/N/2510:2512, 1/N/2574:2578 | Isolated non-canonical cWW with bulges | homologous IL_5J7L_340 IL_07785.1 | |
| IL_9GFT_350 | 1/N/2512:2513, 1/N/2571:2574 | No text annotation | homologous IL_5J7L_341 IL_42626.2 | |
| IL_9GFT_351 | 1/N/2522:2523, 1/N/2540:2543 | Major groove platform with intercalation | homologous IL_5J7L_342 IL_02555.1 | |
| IL_9GFT_352 | 1/N/2591:2592, 1/N/2601:2603 | Single bulged A | homologous IL_5J7L_344 IL_31462.5 | |
| IL_9GFT_353 | 1/N/2636:2640, 1/N/2774:2782 | tSH-tHS-tHW | homologous IL_5J7L_345 IL_04638.3 | |
| IL_9GFT_354 | 1/N/2652:2658, 1/N/2663:2668 | Sarcin-Ricin target in LSU H95; G-bulge | homologous IL_5J7L_346 IL_16458.4 | |
| IL_9GFT_355 | 1/N/2680:2684, 1/N/2725:2727 | C-loop | homologous IL_5J7L_347 IL_63596.11 | |
| IL_9GFT_356 | 1/N/2687:2691, 1/N/2718:2722 | No text annotation | homologous IL_5J7L_348 IL_23774.1 | |
| IL_9GFT_357 | 1/N/2695:2696, 1/N/2711:2714 | Multiple bulged bases | homologous IL_5J7L_349 IL_42626.2 | |
| IL_9GFT_358 | 1/N/2737:2742, 1/N/2762:2767 | UAA/GAN with extra cWW | homologous IL_5J7L_350 IL_49767.8 | |
| IL_9GFT_359 | 1/N/2795:2796, 1/N/2799:2801 | Single bulged A | geometric IL_4WF9_022 IL_31462.5 | |
| IL_9GFT_360 | 1/N/2806:2811, 1/N/2889:2892 | No text annotation | homologous IL_5J7L_351 IL_29471.1 | |
| IL_9GFT_361 | 1/N/2838:2839, 1/N/2878:2880 | Major groove intercalation | homologous IL_5J7L_352 IL_66635.5 | |
| IL_9GFT_362 | 1/N/2843:2846, 1/N/2870:2874 | Multiple bulged bases with non-canonical cWW | homologous IL_5J7L_353 IL_64231.5 | |
| IL_9GFT_363 | 1/N/2847:2852, 1/N/2865:2869 | tHS double platform | homologous IL_5J7L_354 IL_70411.2 | |
| IL_9GFT_364 | 1/O/17:18, 1/O/65:67 | Major groove intercalation | homologous IL_5J7L_355 IL_31462.5 | |
| IL_9GFT_365 | 1/O/23:28, 1/O/56:60 | No text annotation | homologous IL_5J7L_356 IL_18472.4 | |
| IL_9GFT_366 | 1/O/30:31, 1/O/51:54 | Major groove minor groove platform; mini C-loop | homologous IL_5J7L_357 IL_68140.4 | |
| IL_9GFT_367 | 1/O/34:38, 1/O/44:48 | Symmetric double minor groove platform | homologous IL_5J7L_358 IL_58103.11 | |
| IL_9GFT_368 | 1/O/71:79, 1/O/97:105 | Bacterial 5S Loop E | homologous IL_5J7L_359 IL_56455.6 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_9GFT_066 | No text annotation | ||
| IL_9GFT_067 | Self complementary | ||
| IL_9GFT_144 | No text annotation | ||
| IL_9GFT_218 | Isolated non-canonical cWW pair |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_9GFT_001 | 1/0/46:47, 1/0/361:367, 1/0/393:395 | No text annotation | geometric J3_5J7L_001 J3_67856.4 | |
| J3_9GFT_002 | 1/0/46:52, 1/0/359:367, 1/0/393:395 | No text annotation | homologous J3_5J7L_050 J3_46317.4 | |
| J3_9GFT_003 | 1/0/586:588, 1/0/651:654, 1/0/754:755 | No text annotation | geometric J3_1KUQ_001 J3_56052.5 | |
| J3_9GFT_004 | 1/0/586:588, 1/0/651:655, 1/0/751:755 | No text annotation | homologous J3_5J7L_051 J3_17385.4 | |
| J3_9GFT_005 | 1/0/672:673, 1/0/717:725, 1/0/732:734 | No text annotation | homologous J3_5J7L_003 J3_11934.4 | |
| J3_9GFT_006 | 1/0/826:829, 1/0/857:861, 1/0/868:874 | No text annotation | homologous J3_5J7L_004 J3_85054.4 | |
| J3_9GFT_007 | 1/0/936:939, 1/0/1344:1350, 1/0/1372:1379 | No text annotation | homologous J3_5J7L_052 J3_25303.4 | |
| J3_9GFT_008 | 1/0/943:946, 1/0/1235:1237, 1/0/1337:1340 | No text annotation | homologous J3_5J7L_005 J3_52655.4 | |
| J3_9GFT_009 | 1/0/955:962, 1/0/973:984, 1/0/1221:1225 | No text annotation | homologous J3_5J7L_006 J3_83516.4 | |
| J3_9GFT_010 | 1/0/990:993, 1/0/1045:1047, 1/0/1210:1215 | No text annotation | homologous J3_5J7L_007 J3_82572.1 | |
| J3_9GFT_011 | 1/0/990:997, 1/0/1044:1047, 1/0/1210:1215 | No text annotation | homologous J3_5J7L_053 J3_76475.2 | |
| J3_9GFT_012 | 1/0/1003:1007, 1/0/1021:1027, 1/0/1033:1037 | No text annotation | ||
| J3_9GFT_013 | 1/0/1063:1068, 1/0/1107:1113, 1/0/1187:1193 | No text annotation | homologous J3_5J7L_008 J3_08394.3 | |
| J3_9GFT_014 | 1/0/1073:1074, 1/0/1083:1086, 1/0/1099:1102 | No text annotation | homologous J3_4LFB_017 J3_79369.1 | |
| J3_9GFT_015 | 1/0/1116:1118, 1/0/1155:1158, 1/0/1181:1184 | No text annotation | geometric J3_5J7L_010 J3_82365.4 | |
| J3_9GFT_016 | 1/0/1116:1118, 1/0/1155:1161, 1/0/1175:1184 | No text annotation | homologous J3_4LFB_018 J3_17791.2 | |
| J3_9GFT_017 | 1/0/1237:1241, 1/0/1296:1303, 1/0/1334:1337 | No text annotation | homologous J3_5J7L_011 J3_37047.6 | |
| J3_9GFT_018 | 1/AA/46:47, 1/AA/361:367, 1/AA/393:395 | No text annotation | geometric J3_5J7L_001 J3_67856.4 | |
| J3_9GFT_019 | 1/AA/46:52, 1/AA/359:367, 1/AA/393:395 | No text annotation | homologous J3_5J7L_050 J3_46317.4 | |
| J3_9GFT_020 | 1/AA/586:588, 1/AA/651:654, 1/AA/754:755 | No text annotation | geometric J3_1KUQ_001 J3_56052.5 | |
| J3_9GFT_021 | 1/AA/586:588, 1/AA/651:655, 1/AA/751:755 | No text annotation | homologous J3_4LFB_015 J3_17385.4 | |
| J3_9GFT_022 | 1/AA/672:673, 1/AA/717:725, 1/AA/732:734 | No text annotation | homologous J3_5J7L_003 J3_11934.4 | |
| J3_9GFT_023 | 1/AA/826:829, 1/AA/857:861, 1/AA/868:874 | No text annotation | homologous J3_5J7L_004 J3_85054.4 | |
| J3_9GFT_024 | 1/AA/936:939, 1/AA/1344:1350, 1/AA/1372:1379 | No text annotation | homologous J3_4LFB_002 J3_25303.4 | |
| J3_9GFT_025 | 1/AA/943:946, 1/AA/1235:1237, 1/AA/1337:1340 | No text annotation | homologous J3_5J7L_005 J3_52655.4 | |
| J3_9GFT_026 | 1/AA/955:962, 1/AA/973:984, 1/AA/1221:1225 | No text annotation | homologous J3_5J7L_006 J3_83516.4 | |
| J3_9GFT_027 | 1/AA/990:993, 1/AA/1045:1047, 1/AA/1210:1215 | No text annotation | homologous J3_4LFB_005 J3_82572.1 | |
| J3_9GFT_028 | 1/AA/990:997, 1/AA/1044:1047, 1/AA/1210:1215 | No text annotation | homologous J3_4LFB_016 J3_76475.2 | |
| J3_9GFT_029 | 1/AA/1063:1068, 1/AA/1107:1113, 1/AA/1187:1193 | No text annotation | homologous J3_5J7L_008 J3_08394.3 | |
| J3_9GFT_030 | 1/AA/1073:1074, 1/AA/1083:1086, 1/AA/1099:1102 | No text annotation | homologous J3_4LFB_017 J3_79369.1 | |
| J3_9GFT_031 | 1/AA/1116:1118, 1/AA/1155:1158, 1/AA/1181:1184 | No text annotation | geometric J3_5J7L_010 J3_82365.4 | |
| J3_9GFT_032 | 1/AA/1116:1118, 1/AA/1155:1161, 1/AA/1175:1184 | No text annotation | homologous J3_4LFB_018 J3_17791.2 | |
| J3_9GFT_033 | 1/AA/1237:1241, 1/AA/1296:1303, 1/AA/1334:1337 | No text annotation | homologous J3_4LFB_009 J3_37047.6 | |
| J3_9GFT_034 | 1/AV/30:31, 1/AV/474:481, 1/AV/509:510 | No text annotation | geometric J3_5J7L_036 J3_60031.2 | |
| J3_9GFT_035 | 1/AV/30:31, 1/AV/474:484, 1/AV/496:510 | No text annotation | homologous J3_5J7L_066 J3_92134.2 | |
| J3_9GFT_036 | 1/AV/32:35, 1/AV/445:461, 1/AV/468:473 | No text annotation | homologous J3_5J7L_067 J3_30040.2 | |
| J3_9GFT_037 | 1/AV/56:57, 1/AV/70:76, 1/AV/110:114 | No text annotation | homologous J3_5J7L_037 J3_35667.2 | |
| J3_9GFT_038 | 1/AV/683:689, 1/AV/773:775, 1/AV/791:794 | No text annotation | homologous J3_5J7L_038 J3_64189.2 | |
| J3_9GFT_039 | 1/AV/698:700, 1/AV/732:736, 1/AV/760:763 | No text annotation | homologous J3_4WF9_003 J3_44724.7 | |
| J3_9GFT_040 | 1/AV/1054:1057, 1/AV/1081:1087, 1/AV/1102:1105 | No text annotation | ||
| J3_9GFT_041 | 1/AV/1298:1303, 1/AV/1625:1627, 1/AV/1639:1642 | No text annotation | homologous J3_5J7L_041 J3_32852.6 | |
| J3_9GFT_042 | 1/AV/1306:1309, 1/AV/1605:1611, 1/AV/1620:1622 | No text annotation | homologous J3_7A0S_007 J3_71677.1 | |
| J3_9GFT_043 | 1/AV/1344:1349, 1/AV/1382:1385, 1/AV/1402:1403 | No text annotation | homologous J3_5J7L_043 J3_92705.1 | |
| J3_9GFT_044 | 1/AV/1424:1429, 1/AV/1564:1565, 1/AV/1568:1574 | No text annotation | homologous J3_5J7L_069 J3_34864.2 | |
| J3_9GFT_045 | 1/AV/2091:2093, 1/AV/2196:2200, 1/AV/2223:2228 | Kink-turn in J3 | homologous J3_5J7L_044 J3_89368.5 | |
| J3_9GFT_046 | 1/AV/2282:2284, 1/AV/2384:2395, 1/AV/2421:2427 | No text annotation | homologous J3_5J7L_070 J3_20992.1 | |
| J3_9GFT_047 | 1/AV/2295:2299, 1/AV/2317:2323, 1/AV/2332:2337 | No text annotation | homologous J3_5J7L_071 J3_44961.1 | |
| J3_9GFT_048 | 1/AV/2517:2520, 1/AV/2545:2547, 1/AV/2561:2567 | No text annotation | homologous J3_5J7L_046 J3_32601.5 | |
| J3_9GFT_049 | 1/AV/2789:2791, 1/AV/2805:2806, 1/AV/2892:2894 | No text annotation | homologous J3_5J7L_047 J3_30104.1 | |
| J3_9GFT_050 | 1/AV/2812:2815, 1/AV/2831:2836, 1/AV/2882:2888 | No text annotation | homologous J3_5J7L_048 J3_64069.1 | |
| J3_9GFT_051 | 1/AW/10:16, 1/AW/68:70, 1/AW/106:110 | No text annotation | homologous J3_5J7L_049 J3_89095.1 | |
| J3_9GFT_052 | 1/N/30:31, 1/N/474:481, 1/N/509:510 | No text annotation | geometric J3_5J7L_036 J3_60031.2 | |
| J3_9GFT_053 | 1/N/30:31, 1/N/474:484, 1/N/496:510 | No text annotation | homologous J3_9DFE_002 J3_92134.2 | |
| J3_9GFT_054 | 1/N/32:35, 1/N/445:461, 1/N/468:473 | No text annotation | homologous J3_5J7L_067 J3_30040.2 | |
| J3_9GFT_055 | 1/N/56:57, 1/N/70:76, 1/N/110:114 | No text annotation | homologous J3_5J7L_037 J3_35667.2 | |
| J3_9GFT_056 | 1/N/297:301, 1/N/316:325, 1/N/337:341 | No text annotation | homologous J3_5J7L_068 J3_46299.2 | |
| J3_9GFT_057 | 1/N/683:689, 1/N/773:775, 1/N/791:794 | No text annotation | homologous J3_5J7L_038 J3_64189.2 | |
| J3_9GFT_058 | 1/N/698:700, 1/N/732:736, 1/N/760:763 | No text annotation | homologous J3_5J7L_039 J3_44724.7 | |
| J3_9GFT_059 | 1/N/1055:1057, 1/N/1081:1090, 1/N/1101:1104 | No text annotation | ||
| J3_9GFT_060 | 1/N/1298:1303, 1/N/1625:1627, 1/N/1639:1642 | No text annotation | homologous J3_5J7L_041 J3_32852.6 | |
| J3_9GFT_061 | 1/N/1306:1309, 1/N/1605:1611, 1/N/1620:1622 | No text annotation | homologous J3_7A0S_007 J3_71677.1 | |
| J3_9GFT_062 | 1/N/1344:1349, 1/N/1382:1385, 1/N/1402:1403 | No text annotation | homologous J3_5J7L_043 J3_92705.1 | |
| J3_9GFT_063 | 1/N/1424:1429, 1/N/1564:1565, 1/N/1568:1574 | No text annotation | homologous J3_5J7L_069 J3_34864.2 | |
| J3_9GFT_064 | 1/N/2091:2093, 1/N/2196:2200, 1/N/2223:2228 | Kink-turn in J3 | homologous J3_5J7L_044 J3_89368.5 | |
| J3_9GFT_065 | 1/N/2282:2284, 1/N/2384:2395, 1/N/2421:2427 | No text annotation | homologous J3_5J7L_070 J3_20992.1 | |
| J3_9GFT_066 | 1/N/2295:2299, 1/N/2317:2323, 1/N/2332:2337 | No text annotation | ||
| J3_9GFT_067 | 1/N/2517:2520, 1/N/2545:2547, 1/N/2561:2567 | No text annotation | homologous J3_5J7L_046 J3_32601.5 | |
| J3_9GFT_068 | 1/N/2789:2791, 1/N/2805:2806, 1/N/2892:2894 | No text annotation | homologous J3_5J7L_047 J3_30104.1 | |
| J3_9GFT_069 | 1/N/2812:2815, 1/N/2831:2836, 1/N/2882:2888 | No text annotation | homologous J3_5J7L_048 J3_64069.1 | |
| J3_9GFT_070 | 1/O/10:16, 1/O/68:70, 1/O/106:110 | No text annotation | homologous J3_5J7L_049 J3_89095.1 | |
| J4_9GFT_001 | 1/0/115:122, 1/0/239:240, 1/0/286:289, 1/0/311:312 | No text annotation | homologous J4_5J7L_001 J4_35578.3 | |
| J4_9GFT_002 | 1/0/142:144, 1/0/178:184, 1/0/193:198, 1/0/219:221 | No text annotation | homologous J4_5J7L_002 J4_01665.1 | |
| J4_9GFT_003 | 1/0/575:577, 1/0/764:769, 1/0/810:821, 1/0/879:880 | No text annotation | homologous J4_5J7L_003 J4_61885.6 | |
| J4_9GFT_004 | 1/A/7:10, 1/A/25:27, 1/A/43:49, 1/A/65:66 | tRNA junction | homologous J4_3WFS_001 J4_36296.3 | |
| J4_9GFT_005 | 1/A3/7:10, 1/A3/26:28, 1/A3/44:50, 1/A3/66:67 | No text annotation | homologous J4_7MRL_001 J4_70449.27 | |
| J4_9GFT_006 | 1/AA/115:122, 1/AA/239:240, 1/AA/286:289, 1/AA/311:312 | No text annotation | homologous J4_5J7L_001 J4_35578.3 | |
| J4_9GFT_007 | 1/AA/142:144, 1/AA/178:184, 1/AA/193:198, 1/AA/219:221 | No text annotation | homologous J4_5J7L_002 J4_01665.1 | |
| J4_9GFT_008 | 1/AA/575:577, 1/AA/764:769, 1/AA/810:821, 1/AA/879:880 | No text annotation | homologous J4_5J7L_003 J4_61885.6 | |
| J4_9GFT_009 | 1/AU/7:10, 1/AU/25:27, 1/AU/43:49, 1/AU/65:66 | No text annotation | homologous J4_7MRL_001 J4_70449.27 | |
| J4_9GFT_010 | 1/AV/268:269, 1/AV/370:375, 1/AV/399:406, 1/AV/421:424 | No text annotation | homologous J4_5J7L_018 J4_45801.6 | |
| J4_9GFT_011 | 1/AV/297:302, 1/AV/315:319, 1/AV/323:325, 1/AV/337:341 | No text annotation | ||
| J4_9GFT_012 | 1/AV/601:604, 1/AV/624:628, 1/AV/635:638, 1/AV/650:656 | No text annotation | homologous J4_5J7L_020 J4_60168.1 | |
| J4_9GFT_013 | 1/AV/1270:1276, 1/AV/1294:1295, 1/AV/1645:1648, 1/AV/2009:2010 | No text annotation | homologous J4_5J7L_021 J4_64571.5 | |
| J4_9GFT_014 | 1/AV/1310:1314, 1/AV/1338:1343, 1/AV/1404:1405, 1/AV/1597:1604 | No text annotation | homologous J4_5J7L_022 J4_69051.6 | |
| J4_9GFT_015 | 1/AV/1313:1314, 1/AV/1338:1343, 1/AV/1404:1405, 1/AV/1597:1603 | No text annotation | homologous J4_5J7L_023 J4_10313.5 | |
| J4_9GFT_016 | 1/AV/1444:1445, 1/AV/1466:1467, 1/AV/1525:1526, 1/AV/1546:1547 | No text annotation | homologous J4_5J7L_024 J4_24280.2 | |
| J4_9GFT_017 | 1/AV/1772:1776, 1/AV/1788:1792, 1/AV/1827:1830, 1/AV/1975:1979 | No text annotation | homologous J4_5J7L_025 J4_61477.5 | |
| J4_9GFT_018 | 1/AV/1833:1835, 1/AV/1905:1906, 1/AV/1924:1933, 1/AV/1967:1972 | No text annotation | homologous J4_9DFE_008 J4_93343.1 | |
| J4_9GFT_019 | 1/AV/2285:2289, 1/AV/2343:2347, 1/AV/2370:2372, 1/AV/2381:2383 | No text annotation | homologous J4_5J7L_027 J4_04930.6 | |
| J4_9GFT_020 | 1/AV/2643:2646, 1/AV/2674:2676, 1/AV/2731:2735, 1/AV/2769:2771 | No text annotation | homologous J4_5J7L_028 J4_77044.4 | |
| J4_9GFT_021 | 1/M/7:10, 1/M/24:26, 1/M/42:48, 1/M/64:65 | tRNA junction | homologous J4_1IL2_001 J4_70449.27 | |
| J4_9GFT_022 | 1/N/268:269, 1/N/370:375, 1/N/399:406, 1/N/421:424 | No text annotation | homologous J4_5J7L_018 J4_45801.6 | |
| J4_9GFT_023 | 1/N/297:301, 1/N/316:319, 1/N/323:325, 1/N/337:341 | No text annotation | homologous J4_5J7L_019 J4_71729.5 | |
| J4_9GFT_024 | 1/N/601:604, 1/N/624:628, 1/N/635:638, 1/N/650:656 | No text annotation | homologous J4_5J7L_020 J4_60168.1 | |
| J4_9GFT_025 | 1/N/1270:1276, 1/N/1294:1295, 1/N/1645:1648, 1/N/2009:2010 | No text annotation | homologous J4_5J7L_021 J4_64571.5 | |
| J4_9GFT_026 | 1/N/1310:1314, 1/N/1338:1343, 1/N/1404:1405, 1/N/1597:1604 | No text annotation | homologous J4_5J7L_022 J4_69051.6 | |
| J4_9GFT_027 | 1/N/1313:1314, 1/N/1338:1343, 1/N/1404:1405, 1/N/1597:1603 | No text annotation | homologous J4_5J7L_023 J4_10313.5 | |
| J4_9GFT_028 | 1/N/1444:1445, 1/N/1466:1467, 1/N/1525:1526, 1/N/1546:1547 | No text annotation | homologous J4_5J7L_024 J4_24280.2 | |
| J4_9GFT_029 | 1/N/1772:1776, 1/N/1788:1792, 1/N/1827:1830, 1/N/1975:1979 | No text annotation | homologous J4_5J7L_025 J4_61477.5 | |
| J4_9GFT_030 | 1/N/1833:1835, 1/N/1905:1906, 1/N/1924:1933, 1/N/1967:1972 | No text annotation | homologous J4_9DFE_008 J4_93343.1 | |
| J4_9GFT_031 | 1/N/2285:2289, 1/N/2343:2347, 1/N/2370:2372, 1/N/2381:2383 | No text annotation | homologous J4_9DFE_009 J4_04930.6 | |
| J4_9GFT_032 | 1/N/2643:2646, 1/N/2674:2676, 1/N/2731:2735, 1/N/2769:2771 | No text annotation | homologous J4_5J7L_028 J4_77044.4 | |
| J5_9GFT_001 | 1/0/36:39, 1/0/403:407, 1/0/435:440, 1/0/497:500, 1/0/545:548 | No text annotation | homologous J5_5J7L_001 J5_92941.1 | |
| J5_9GFT_002 | 1/0/58:61, 1/0/106:113, 1/0/314:316, 1/0/337:339, 1/0/350:354 | No text annotation | homologous J5_5J7L_003 J5_59910.6 | |
| J5_9GFT_003 | 1/AA/36:39, 1/AA/403:406, 1/AA/436:440, 1/AA/497:500, 1/AA/545:548 | No text annotation | homologous J5_5J7L_001 J5_92941.1 | |
| J5_9GFT_004 | 1/AA/36:39, 1/AA/403:406, 1/AA/436:442, 1/AA/492:500, 1/AA/545:548 | No text annotation | homologous J5_5J7L_002 J5_67416.1 | |
| J5_9GFT_005 | 1/AA/58:61, 1/AA/106:113, 1/AA/314:316, 1/AA/337:339, 1/AA/350:354 | No text annotation | homologous J5_5J7L_003 J5_59910.6 | |
| J5_9GFT_006 | 1/AV/47:54, 1/AV/116:121, 1/AV/130:131, 1/AV/148:150, 1/AV/176:178 | No text annotation | homologous J5_5J7L_013 J5_01737.2 | |
| J5_9GFT_007 | 1/AV/531:533, 1/AV/560:564, 1/AV/577:579, 1/AV/1261:1262, 1/AV/2017:2018 | No text annotation | homologous J5_5J7L_014 J5_43153.5 | |
| J5_9GFT_008 | 1/AV/584:589, 1/AV/668:671, 1/AV/809:812, 1/AV/1195:1196, 1/AV/1250:1256 | No text annotation | homologous J5_5J7L_015 J5_74302.5 | |
| J5_9GFT_009 | 1/AV/1674:1682, 1/AV/1706:1707, 1/AV/1751:1752, 1/AV/1756:1764, 1/AV/1988:1990 | No text annotation | homologous J5_5J7L_016 J5_62523.6 | |
| J5_9GFT_010 | 1/AV/2057:2064, 1/AV/2446:2453, 1/AV/2500:2507, 1/AV/2582:2588, 1/AV/2606:2611 | No text annotation | ||
| J5_9GFT_011 | 1/AV/2074:2077, 1/AV/2243:2246, 1/AV/2258:2259, 1/AV/2281:2282, 1/AV/2427:2435 | No text annotation | homologous J5_4WF9_007 J5_39529.1 | |
| J5_9GFT_012 | 1/N/47:54, 1/N/116:121, 1/N/130:131, 1/N/148:150, 1/N/176:178 | No text annotation | homologous J5_5J7L_013 J5_01737.2 | |
| J5_9GFT_013 | 1/N/531:533, 1/N/560:564, 1/N/577:579, 1/N/1261:1262, 1/N/2017:2018 | No text annotation | homologous J5_5J7L_014 J5_43153.5 | |
| J5_9GFT_014 | 1/N/584:589, 1/N/668:671, 1/N/809:812, 1/N/1195:1196, 1/N/1250:1256 | No text annotation | homologous J5_5J7L_015 J5_74302.5 | |
| J5_9GFT_015 | 1/N/1674:1682, 1/N/1706:1707, 1/N/1751:1752, 1/N/1756:1764, 1/N/1988:1990 | No text annotation | homologous J5_5J7L_016 J5_62523.6 | |
| J5_9GFT_016 | 1/N/2057:2064, 1/N/2446:2453, 1/N/2500:2506, 1/N/2583:2588, 1/N/2606:2611 | No text annotation | ||
| J5_9GFT_017 | 1/N/2074:2077, 1/N/2243:2246, 1/N/2258:2259, 1/N/2281:2282, 1/N/2427:2435 | No text annotation | homologous J5_4WF9_007 J5_39529.1 | |
| J6_9GFT_001 | 1/AV/45:46, 1/AV/179:183, 1/AV/214:224, 1/AV/231:235, 1/AV/262:266, 1/AV/426:433 | No text annotation | ||
| J6_9GFT_002 | 1/N/45:46, 1/N/179:183, 1/N/214:224, 1/N/231:235, 1/N/262:266, 1/N/426:433 | No text annotation | ||
| J6_9GFT_003 | 1/N/2074:2077, 1/N/2243:2246, 1/N/2258:2259, 1/N/2281:2284, 1/N/2384:2395, 1/N/2421:2435 | No text annotation | ||
| J7_9GFT_001 | 1/AV/8:15, 1/AV/525:531, 1/AV/2018:2023, 1/AV/2040:2043, 1/AV/2625:2630, 1/AV/2788:2789, 1/AV/2894:2895 | No text annotation | ||
| J7_9GFT_002 | 1/AV/817:822, 1/AV/835:837, 1/AV/942:946, 1/AV/971:976, 1/AV/987:991, 1/AV/1163:1164, 1/AV/1185:1190 | No text annotation | ||
| J7_9GFT_003 | 1/N/8:15, 1/N/525:531, 1/N/2018:2023, 1/N/2040:2043, 1/N/2625:2630, 1/N/2788:2789, 1/N/2894:2895 | No text annotation | ||
| J7_9GFT_004 | 1/N/817:822, 1/N/835:838, 1/N/940:946, 1/N/971:976, 1/N/987:991, 1/N/1163:1164, 1/N/1185:1190 | No text annotation |
Problematic loops
No problematic loops
Coloring options: