HL_9GFT_063
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUCCGGC
- Length
- 7 nucleotides
- Bulged bases
- 9GFT|1|AA|C|1136, 9GFT|1|AA|G|1139
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9GFT_063 not in the Motif Atlas
- Homologous match to HL_4LFB_026
- Geometric discrepancy: 0.2951
- The information below is about HL_4LFB_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87954.2
- Basepair signature
- cWW-tSW-F
- Number of instances in this motif group
- 7
Unit IDs
9GFT|1|AA|G|1134
9GFT|1|AA|U|1135
9GFT|1|AA|C|1136
9GFT|1|AA|C|1137
9GFT|1|AA|G|1138
9GFT|1|AA|G|1139
9GFT|1|AA|C|1140
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AI
- Small ribosomal subunit protein uS9
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