HL_9GFT_076

3D structure

PDB id

9GFT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the HrpA-bound E. coli disome, Class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UUUCGA

Length

6 nucleotides

Bulged bases

9GFT|1|AV|U|138, 9GFT|1|AV|U|139, 9GFT|1|AV|G|141

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9GFT_076 not in the Motif Atlas

Geometric match to HL_4WF9_037

Geometric discrepancy: 0.356

The information below is about HL_4WF9_037

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

9GFT|1|AV|U|137
9GFT|1|AV|U|138
9GFT|1|AV|U|139
9GFT|1|AV|C|140
9GFT|1|AV|G|141
9GFT|1|AV|A|142

Current chains

Chain AV

23S RNA

Nearby chains

Chain Ao

Large ribosomal subunit protein uL23