HL_9GFT_082
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAUAC
- Length
- 5 nucleotides
- Bulged bases
- 9GFT|1|AV|U|321, 9GFT|1|AV|A|322
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9GFT_082 not in the Motif Atlas
- Homologous match to HL_9DFE_010
- Geometric discrepancy: 0.1072
- The information below is about HL_9DFE_010
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.5
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 19
Unit IDs
9GFT|1|AV|G|319
9GFT|1|AV|A|320
9GFT|1|AV|U|321
9GFT|1|AV|A|322
9GFT|1|AV|C|323
Current chains
- Chain AV
- 23S RNA
Nearby chains
- Chain AZ
- Large ribosomal subunit protein uL4
- Chain Ap
- Large ribosomal subunit protein uL24
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