HL_9GFT_086
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGUGAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9GFT_086 not in the Motif Atlas
- Homologous match to HL_4WF9_015
- Geometric discrepancy: 0.0948
- The information below is about HL_4WF9_015
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.8
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 352
Unit IDs
9GFT|1|AV|C|462
9GFT|1|AV|G|463
9GFT|1|AV|U|464
9GFT|1|AV|G|465
9GFT|1|AV|A|466
9GFT|1|AV|G|467
Current chains
- Chain AV
- 23S RNA
Nearby chains
- Chain AZ
- Large ribosomal subunit protein uL4
- Chain Ax
- Large ribosomal subunit protein bL34
Coloring options: