HL_9GFT_095
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UGAAAGG
- Length
- 7 nucleotides
- Bulged bases
- 9GFT|1|AV|A|781, 9GFT|1|AV|G|784
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9GFT_095 not in the Motif Atlas
- Geometric match to HL_2NUE_001
- Geometric discrepancy: 0.3965
- The information below is about HL_2NUE_001
- Detailed Annotation
- UNCG variation
- Broad Annotation
- UNCG variation
- Motif group
- HL_53890.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
9GFT|1|AV|U|779
9GFT|1|AV|G|780
9GFT|1|AV|A|781
9GFT|1|AV|A|782
9GFT|1|AV|A|783
9GFT|1|AV|G|784
9GFT|1|AV|G|785
Current chains
- Chain AV
- 23S RNA
Nearby chains
- Chain AX
- Large ribosomal subunit protein uL2
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