HL_9GFT_167
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UGUUGAAAAA
- Length
- 10 nucleotides
- Bulged bases
- 9GFT|1|N|U|747, 9GFT|1|N|A|751, 9GFT|1|N|A|752
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9GFT_167 not in the Motif Atlas
- Homologous match to HL_7A0S_022
- Geometric discrepancy: 0.1412
- The information below is about HL_7A0S_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_88205.2
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 7
Unit IDs
9GFT|1|N|U|744
9GFT|1|N|G|745
9GFT|1|N|U|746
9GFT|1|N|U|747
9GFT|1|N|G|748
9GFT|1|N|A|749
9GFT|1|N|A|750
9GFT|1|N|A|751
9GFT|1|N|A|752
9GFT|1|N|A|753
Current chains
- Chain N
- 23S RNA
Nearby chains
- Chain Q
- 50S ribosomal protein L3
- Chain f
- Large ribosomal subunit protein uL22
- Chain n
- Large ribosomal subunit protein bL32
- Chain p
- Large ribosomal subunit protein bL34
- Chain s
- VemP nascent chain
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