HL_9GFT_204
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AGUUCAUAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9GFT_204 not in the Motif Atlas
- Homologous match to HL_9DFE_058
- Geometric discrepancy: 0.1898
- The information below is about HL_9DFE_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_52011.1
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
9GFT|1|N|A|2471
9GFT|1|N|G|2472
9GFT|1|N|U|2473
9GFT|1|N|U|2474
9GFT|1|N|C|2475
9GFT|1|N|A|2476
9GFT|1|N|U|2477
9GFT|1|N|A|2478
9GFT|1|N|U|2479
Current chains
- Chain N
- 23S RNA
Nearby chains
- Chain A
- Transfer RNA; tRNA
- Chain T
- Large ribosomal subunit protein uL6
- Chain Z
- 50S ribosomal protein L16
- Chain r
- Large ribosomal subunit protein bL36A
Coloring options: