HL_9GHD_061
3D structure
- PDB id
- 9GHD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli 70S ribosome in complex with Staphylococcus aureus FusB-EF-G (FusB-EF-G-70S*)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.41 Å
Loop
- Sequence
- CGUAAUAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9GHD_061 not in the Motif Atlas
- Homologous match to HL_6PRV_002
- Geometric discrepancy: 0.1991
- The information below is about HL_6PRV_002
- Detailed Annotation
- GNRA wlth tandem sheared
- Broad Annotation
- No text annotation
- Motif group
- HL_98423.3
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
9GHD|1|a|C|1092
9GHD|1|a|G|1093
9GHD|1|a|U|1094
9GHD|1|a|A|1095
9GHD|1|a|A|1096
9GHD|1|a|U|1097
9GHD|1|a|A|1098
9GHD|1|a|G|1099
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 3
- 50S ribosomal protein L36
- Chain V
- Far1
- Chain W
- Elongation factor G
- Chain g
- 50S ribosomal protein L6
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