HL_9GHG_054
3D structure
- PDB id
- 9GHG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the small subunit of the S. aureus 70S ribosome (FusB-Sa70S:SSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.22 Å
Loop
- Sequence
- GUUGGAAAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9GHG_054 not in the Motif Atlas
- Homologous match to HL_5J7L_219
- Geometric discrepancy: 0.2425
- The information below is about HL_5J7L_219
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50860.2
- Basepair signature
- cWW-F-cWH-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
9GHG|1|A|G|2331
9GHG|1|A|U|2332
9GHG|1|A|U|2333
9GHG|1|A|G|2334
9GHG|1|A|G|2335
9GHG|1|A|A|2336
9GHG|1|A|A|2337
9GHG|1|A|A|2338
9GHG|1|A|U|2339
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain J
- 50S ribosomal protein L5
Coloring options: