HL_9GHG_086
3D structure
- PDB id
- 9GHG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the small subunit of the S. aureus 70S ribosome (FusB-Sa70S:SSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.22 Å
Loop
- Sequence
- AACUGAGACACGGU
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9GHG_086 not in the Motif Atlas
- Homologous match to HL_5J7L_008
- Geometric discrepancy: 0.0562
- The information below is about HL_5J7L_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81205.3
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
9GHG|1|a|A|328
9GHG|1|a|A|329
9GHG|1|a|C|330
9GHG|1|a|U|331
9GHG|1|a|G|332
9GHG|1|a|A|333
9GHG|1|a|G|334
9GHG|1|a|A|335
9GHG|1|a|C|336
9GHG|1|a|A|337
9GHG|1|a|C|338
9GHG|1|a|G|339
9GHG|1|a|G|340
9GHG|1|a|U|341
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain q
- 30S ribosomal protein S16
- Chain u
- 30S ribosomal protein S20
Coloring options: