HL_9GHH_092

3D structure

PDB id

9GHH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GCUCAAC

Length

7 nucleotides

Bulged bases

9GHH|1|a|U|627

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9GHH_092 not in the Motif Atlas

Homologous match to HL_4LFB_014

Geometric discrepancy: 0.0997

The information below is about HL_4LFB_014

Detailed Annotation

GNRA-like with tWH

Broad Annotation

GNRA

Motif group

HL_10453.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

9GHH|1|a|G|625
9GHH|1|a|C|626
9GHH|1|a|U|627
9GHH|1|a|C|628
9GHH|1|a|A|629
9GHH|1|a|A|630
9GHH|1|a|C|631

Current chains

Chain a

16S rRNA

Nearby chains

Chain e

30S ribosomal protein S4

Chain q

30S ribosomal protein S16