HL_9GJ6_005

3D structure

PDB id

9GJ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome in complex with NatA in proximal and distal position

Experimental method

ELECTRON MICROSCOPY

Resolution

3.91 Å

Loop

Sequence

ACGAGAACU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GJ6|1|1|A|2376
9GJ6|1|1|C|2377
9GJ6|1|1|G|2378
9GJ6|1|1|A|2379
9GJ6|1|1|G|2380
9GJ6|1|1|A|2381
9GJ6|1|1|A|2382
9GJ6|1|1|C|2383
9GJ6|1|1|U|2384

Current chains

Chain 1

28S rRNA

Nearby chains

Chain D

N-alpha-acetyltransferase 15, NatA auxiliary subunit

Chain LR

60S ribosomal protein L19

Chain Ld

60S ribosomal protein L31