HL_9GJ6_006
3D structure
- PDB id
- 9GJ6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 80S ribosome in complex with NatA in proximal and distal position
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.91 Å
Loop
- Sequence
- GUUCAGAUCC
- Length
- 10 nucleotides
- Bulged bases
- 9GJ6|1|1|U|2530, 9GJ6|1|1|C|2531
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9GJ6_006 not in the Motif Atlas
- Homologous match to HL_8GLP_038
- Geometric discrepancy: 0.1378
- The information below is about HL_8GLP_038
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_77449.4
- Basepair signature
- cWW-tWH-F-F-F-F
- Number of instances in this motif group
- 18
Unit IDs
9GJ6|1|1|G|2523
9GJ6|1|1|U|2524
9GJ6|1|1|U|2525
9GJ6|1|1|C|2526
9GJ6|1|1|A|2527
9GJ6|1|1|G|2528
9GJ6|1|1|A|2529
9GJ6|1|1|U|2530
9GJ6|1|1|C|2531
9GJ6|1|1|C|2532
Current chains
- Chain 1
- 28S rRNA
Nearby chains
- Chain LR
- 60S ribosomal protein L19
- Chain LX
- 60S ribosomal protein L23a
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