HL_9GMO_015
3D structure
- PDB id
- 9GMO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.59 Å
Loop
- Sequence
- UGAAGG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9GMO_015 not in the Motif Atlas
- Homologous match to HL_8C3A_016
- Geometric discrepancy: 0.0737
- The information below is about HL_8C3A_016
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 360
Unit IDs
9GMO|1|A|U|1389
9GMO|1|A|G|1390
9GMO|1|A|A|1391
9GMO|1|A|A|1392
9GMO|1|A|G|1393
9GMO|1|A|G|1394
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain K
- 60S ribosomal protein L18
- Chain U
- 60S ribosomal protein L27a
- Chain c
- 60S ribosomal protein L36
- Chain r
- 60S ribosomal protein L13
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