HL_9GMO_061
3D structure
- PDB id
- 9GMO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.59 Å
Loop
- Sequence
- GUAGACGAC
- Length
- 9 nucleotides
- Bulged bases
- 9GMO|1|A|U|4976
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9GMO_061 not in the Motif Atlas
- Homologous match to HL_8C3A_071
- Geometric discrepancy: 0.0984
- The information below is about HL_8C3A_071
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_64690.4
- Basepair signature
- cWW-cSW-F-F-F-cWW
- Number of instances in this motif group
- 9
Unit IDs
9GMO|1|A|G|4975
9GMO|1|A|U|4976
9GMO|1|A|A|4977
9GMO|1|A|G|4978
9GMO|1|A|A|4979
9GMO|1|A|C|4980
9GMO|1|A|G|4981
9GMO|1|A|A|4982
9GMO|1|A|C|4983
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain E
- 60S ribosomal protein L3
- Chain J
- 60S ribosomal protein L17
Coloring options: