HL_9GR1_034
3D structure
- PDB id
- 9GR1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-TEC complex in delivery state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.17 Å
Loop
- Sequence
- A(PSU)UGAA(MIA)A(PSU)
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU, MIA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9GR1_034 not in the Motif Atlas
- Homologous match to HL_6ORD_036
- Geometric discrepancy: 0.1694
- The information below is about HL_6ORD_036
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.2
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 47
Unit IDs
9GR1|1|Z|A|31
9GR1|1|Z|PSU|32
9GR1|1|Z|U|33
9GR1|1|Z|G|34
9GR1|1|Z|A|35
9GR1|1|Z|A|36
9GR1|1|Z|MIA|37
9GR1|1|Z|A|38
9GR1|1|Z|PSU|39
Current chains
- Chain Z
- Phe-NH-tRNA(Phe) A-site
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain L
- Small ribosomal subunit protein uS12
- Chain X
- mRNA in ribosome channel
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: