HL_9GR1_059

3D structure

PDB id

9GR1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-TEC complex in delivery state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.17 Å

Loop

Sequence

CAUCCCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9GR1_059 not in the Motif Atlas

Geometric match to HL_5TBW_075

Geometric discrepancy: 0.3098

The information below is about HL_5TBW_075

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_22523.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

13

Unit IDs

9GR1|1|a|C|887
9GR1|1|a|A|888
9GR1|1|a|U|889
9GR1|1|a|C|890
9GR1|1|a|C|891
9GR1|1|a|C|892
9GR1|1|a|G|893

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain M

Small ribosomal subunit protein uS13