HL_9GR1_078
3D structure
- PDB id
- 9GR1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-TEC complex in delivery state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.17 Å
Loop
- Sequence
- G(PSU)AAC(3TD)A(PSU)AAC
- Length
- 11 nucleotides
- Bulged bases
- 9GR1|1|a|A|1917
- QA status
- Modified nucleotides: PSU, 3TD
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9GR1_078 not in the Motif Atlas
- Homologous match to HL_9DFE_046
- Geometric discrepancy: 0.2427
- The information below is about HL_9DFE_046
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_82185.1
- Basepair signature
- cWW-F-F-tHW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
9GR1|1|a|G|1914
9GR1|1|a|PSU|1915
9GR1|1|a|A|1916
9GR1|1|a|A|1917
9GR1|1|a|C|1918
9GR1|1|a|3TD|1919
9GR1|1|a|A|1920
9GR1|1|a|PSU|1921
9GR1|1|a|A|1922
9GR1|1|a|A|1923
9GR1|1|a|C|1924
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain X
- mRNA in ribosome channel
- Chain Y
- Transfer RNA; tRNA
- Chain Z
- Transfer RNA; tRNA
Coloring options: