HL_9GR1_095

3D structure

PDB id

9GR1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-TEC complex in delivery state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.17 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

9GR1|1|a|G|2755, 9GR1|1|a|C|2759

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9GR1_095 not in the Motif Atlas

Homologous match to HL_5J7L_199

Geometric discrepancy: 0.0566

The information below is about HL_5J7L_199

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74055.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

9GR1|1|a|C|2749
9GR1|1|a|U|2750
9GR1|1|a|G|2751
9GR1|1|a|A|2752
9GR1|1|a|A|2753
9GR1|1|a|A|2754
9GR1|1|a|G|2755
9GR1|1|a|C|2756
9GR1|1|a|A|2757
9GR1|1|a|U|2758
9GR1|1|a|C|2759
9GR1|1|a|U|2760
9GR1|1|a|A|2761
9GR1|1|a|A|2762
9GR1|1|a|G|2763

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain 3

50S ribosomal protein L36

Chain g

50S ribosomal protein L6

Chain i

50S ribosomal protein L13