HL_9GUT_002

3D structure

PDB id

9GUT (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S mRNA delivery complex (bS1 resolved)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GCUUGC

Length

6 nucleotides

Bulged bases

9GUT|1|A|U|84, 9GUT|1|A|U|85

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9GUT_002 not in the Motif Atlas

Geometric match to HL_8C3A_198

Geometric discrepancy: 0.3585

The information below is about HL_8C3A_198

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_46878.1

Basepair signature

cWW-F

Number of instances in this motif group

30

Unit IDs

9GUT|1|A|G|82
9GUT|1|A|C|83
9GUT|1|A|U|84
9GUT|1|A|U|85
9GUT|1|A|G|86
9GUT|1|A|C|87

Current chains

Chain A

16S ribosomal RNA

Nearby chains