HL_9GUV_034

3D structure

PDB id

9GUV (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S mRNA delivery complex (closed-head)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

G(OMC)UCAUAAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9GUV_034 not in the Motif Atlas

Homologous match to HL_1U0B_002

Geometric discrepancy: 0.2242

The information below is about HL_1U0B_002

Detailed Annotation

tRNA anticodon loop

Broad Annotation

Anticodon loop

Motif group

HL_81376.2

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

42

Unit IDs

9GUV|1|W|G|32
9GUV|1|W|OMC|33
9GUV|1|W|U|34
9GUV|1|W|C|35
9GUV|1|W|A|36
9GUV|1|W|U|37
9GUV|1|W|A|38
9GUV|1|W|A|39
9GUV|1|W|C|40

Current chains

Chain W

tRNA(fmet) P-site

Nearby chains

Chain C

30S ribosomal protein S2