HL_9GUW_006

3D structure

PDB id

9GUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-TEC (TEC in expressome position) Inactive state 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGUAACGGC

Length

9 nucleotides

Bulged bases

9GUW|1|A|G|266

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9GUW_006 not in the Motif Atlas

Homologous match to HL_5J7L_006

Geometric discrepancy: 0.1099

The information below is about HL_5J7L_006

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_84299.4

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

9GUW|1|A|G|259
9GUW|1|A|G|260
9GUW|1|A|U|261
9GUW|1|A|A|262
9GUW|1|A|A|263
9GUW|1|A|C|264
9GUW|1|A|G|265
9GUW|1|A|G|266
9GUW|1|A|C|267

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain R

30S ribosomal protein S17

Chain U

30S ribosomal protein S20