HL_9GUW_017

3D structure

PDB id

9GUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-TEC (TEC in expressome position) Inactive state 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAUUAGAUACC

Length

11 nucleotides

Bulged bases

9GUW|1|A|U|789

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9GUW_017 not in the Motif Atlas

Geometric match to HL_6JXM_002

Geometric discrepancy: 0.328

The information below is about HL_6JXM_002

Detailed Annotation

tRNA anticodon loop

Broad Annotation

tRNA anticodon loop

Motif group

HL_31585.4

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

20

Unit IDs

9GUW|1|A|G|786
9GUW|1|A|A|787
9GUW|1|A|U|788
9GUW|1|A|U|789
9GUW|1|A|A|790
9GUW|1|A|G|791
9GUW|1|A|A|792
9GUW|1|A|U|793
9GUW|1|A|A|794
9GUW|1|A|C|795
9GUW|1|A|C|796

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain L

30S ribosomal protein S11