HL_9H3G_009

3D structure

PDB id

9H3G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

1.82 Å

Loop

Sequence

CUGGAAAG

Length

8 nucleotides

Bulged bases

9H3G|1|A|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13999.4

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

24

Unit IDs

9H3G|1|A|C|191
9H3G|1|A|U|192
9H3G|1|A|G|193
9H3G|1|A|G|194
9H3G|1|A|A|195
9H3G|1|A|A|196
9H3G|1|A|A|197
9H3G|1|A|G|198

Current chains

Chain A

Ribosomal RNA 25S

Nearby chains

Chain AV

Large ribosomal subunit protein eL32z

Chain BO

Large ribosomal subunit protein uL24z

Chain BT

Large ribosomal subunit protein uL4z