RNA 3D Hub //

9H3G Hairpin, Internal, and multi-helix Junction Loop Motifs

Download loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_9H3G_0011/3/51:60No text annotation
HL_17803.2
HL_9H3G_0021/3/72:95No text annotation
HL_9H3G_0031/3/112:118No text annotation
HL_91813.1
HL_9H3G_0041/3/128:135No text annotation
HL_61768.2
HL_9H3G_0051/A/36:43No text annotation
HL_48677.2
HL_9H3G_0061/A/67:72No text annotation
HL_91813.1
HL_9H3G_0071/A/88:94No text annotation
HL_76371.3
HL_9H3G_0081/A/130:134No text annotation
HL_90436.4
HL_9H3G_0091/A/191:198No text annotation
HL_13999.4
HL_9H3G_0101/A/205:209No text annotation
HL_75660.9
HL_9H3G_0111/A/213:221No text annotation
HL_27670.5
HL_9H3G_0121/A/275:284No text annotation
HL_63894.3
HL_9H3G_0131/A/300:309No text annotation
HL_00911.3
HL_9H3G_0141/A/354:359No text annotation
HL_34789.5
HL_9H3G_0151/A/379:384No text annotation
HL_34789.5
HL_9H3G_0161/A/464:469No text annotation
HL_34789.5
HL_9H3G_0171/A/533:543No text annotation
HL_9H3G_0191/A/599:604No text annotation
HL_61337.5
HL_9H3G_0201/A/652:661No text annotation
HL_33597.4
HL_9H3G_0211/A/698:707No text annotation
HL_18470.3
HL_9H3G_0221/A/721:726No text annotation
HL_34789.5
HL_9H3G_0231/A/742:747No text annotation
HL_34789.5
HL_9H3G_0241/A/772:777No text annotation
HL_44506.3
HL_9H3G_0251/A/853:858No text annotation
HL_34789.5
HL_9H3G_0261/A/885:894No text annotation
HL_50204.2
HL_9H3G_0271/A/919:927No text annotation
HL_46211.1
HL_9H3G_0281/A/967:972No text annotation
HL_27530.2
HL_9H3G_0301/A/1086:1093No text annotation
HL_63894.3
HL_9H3G_0311/A/1135:1141No text annotation
HL_34789.5
HL_9H3G_0321/A/1157:1164No text annotation
HL_47171.2
HL_9H3G_0331/A/1357:1367No text annotation
HL_9H3G_0341/A/1412:1417No text annotation
HL_34789.5
HL_9H3G_0351/A/1471:1479No text annotation
HL_33597.4
HL_9H3G_0361/A/1514:1522No text annotation
HL_10322.1
HL_9H3G_0371/A/1553:1558No text annotation
HL_34789.5
HL_9H3G_0381/A/1571:1577No text annotation
HL_46211.1
HL_9H3G_0391/A/1600:1609No text annotation
HL_77449.2
HL_9H3G_0401/A/1634:1639No text annotation
HL_34789.5
HL_9H3G_0411/A/1680:1688No text annotation
HL_22758.2
HL_9H3G_0421/A/1720:1726No text annotation
HL_9H3G_0431/A/1760:1768No text annotation
HL_55735.1
HL_9H3G_0441/A/1794:1798No text annotation
HL_90436.4
HL_9H3G_0451/A/1846:1853No text annotation
HL_28592.3
HL_9H3G_0461/A/1864:1870No text annotation
HL_34789.5
HL_9H3G_0471/A/1925:1930No text annotation
HL_61337.5
HL_9H3G_0481/A/2109:2113No text annotation
HL_16651.2
HL_9H3G_0491/A/2134:2144No text annotation
HL_87681.2
HL_9H3G_0501/A/2163:2168No text annotation
HL_34789.5
HL_9H3G_0511/A/2218:2223No text annotation
HL_34789.5
HL_9H3G_0521/A/2251:2261No text annotation
HL_82185.2
HL_9H3G_0531/A/2290:2298No text annotation
HL_77449.2
HL_9H3G_0541/A/2367:2376No text annotation
HL_78372.2
HL_9H3G_0551/A/2615:2623No text annotation
HL_11974.3
HL_9H3G_0561/A/2632:2644No text annotation
HL_02042.2
HL_9H3G_0571/A/2672:2680No text annotation
HL_02452.2
HL_9H3G_0581/A/2692:2699No text annotation
HL_52651.3
HL_9H3G_0591/A/2723:2731No text annotation
HL_15296.2
HL_9H3G_0601/A/2743:2748No text annotation
HL_34789.5
HL_9H3G_0611/A/2775:2783No text annotation
HL_52651.3
HL_9H3G_0621/A/2839:2847No text annotation
HL_52011.2
HL_9H3G_0631/A/2896:2903No text annotation
HL_46665.3
HL_9H3G_0641/A/2919:2925No text annotation
HL_48677.2
HL_9H3G_0651/A/2962:2967No text annotation
HL_34789.5
HL_9H3G_0661/A/3023:3028No text annotation
HL_34789.5
HL_9H3G_0671/A/3066:3071No text annotation
HL_12125.3
HL_9H3G_0681/A/3108:3122No text annotation
HL_53269.3
HL_9H3G_0691/A/3185:3189No text annotation
HL_61337.5
HL_9H3G_0701/A/3228:3235No text annotation
HL_31089.2
HL_9H3G_0711/A/3290:3298No text annotation
HL_37889.2
HL_9H3G_0721/A/3336:3343No text annotation
HL_36488.2
HL_9H3G_0731/C3/32:45No text annotation
HL_97756.4
HL_9H3G_0741/C3/36:41No text annotation
HL_59381.3
HL_9H3G_0751/C3/86:91GNRA
HL_34789.5
HL_9H3G_0761/W2/13:22tRNA D-loop
homologous
HL_3EPH_001
HL_45175.1
HL_9H3G_0771/W2/31:39tRNA anticodon loop
homologous
HL_9MTS_102
HL_81376.3
HL_9H3G_0781/W2/53:61T-loop with 2 stacked bulged bases
homologous
HL_4YYE_003
HL_33597.4
HL_9H3G_0791/h1/7:17No text annotation
HL_73535.2
HL_9H3G_0801/h1/70:82No text annotation
HL_9H3G_0811/h1/152:158No text annotation
HL_34789.5
HL_9H3G_0831/h1/244:251No text annotation
HL_67772.2
HL_9H3G_0841/h1/332:340No text annotation
HL_87268.3
HL_9H3G_0851/h1/370:375No text annotation
HL_34789.5
HL_9H3G_0861/h1/395:406No text annotation
HL_86432.2
HL_9H3G_0871/h1/416:421No text annotation
HL_61337.5
HL_9H3G_0881/h1/452:458No text annotation
HL_89167.3
HL_9H3G_0891/h1/522:534No text annotation
HL_68749.2
HL_9H3G_0901/h1/571:576No text annotation
HL_93535.3
HL_9H3G_0911/h1/767:775No text annotation
HL_11974.3
HL_9H3G_0921/h1/780:785No text annotation
HL_61337.5
HL_9H3G_0931/h1/901:910No text annotation
HL_38491.3
HL_9H3G_0941/h1/938:943No text annotation
HL_34789.5
HL_9H3G_0951/h1/998:1008No text annotation
HL_38491.3
HL_9H3G_0961/h1/1058:1064No text annotation
HL_34789.5
HL_9H3G_0971/h1/1085:1090No text annotation
HL_34789.5
HL_9H3G_0981/h1/1122:1127No text annotation
HL_34789.5
HL_9H3G_0991/h1/1189:1198No text annotation
HL_97521.2
HL_9H3G_1001/h1/1239:1248No text annotation
HL_98423.4
HL_9H3G_1011/h1/1297:1302No text annotation
HL_34789.5
HL_9H3G_1021/h1/1310:1317No text annotation
HL_63894.3
HL_9H3G_1031/h1/1361:1366No text annotation
HL_33487.2
HL_9H3G_1041/h1/1399:1405No text annotation
HL_34789.5
HL_9H3G_1051/h1/1504:1509No text annotation
HL_34789.5
HL_9H3G_1061/h1/1552:1563No text annotation
HL_50951.2
HL_9H3G_1071/h1/1596:1604No text annotation
HL_25307.1
HL_9H3G_1081/h1/1782:1787No text annotation
HL_34789.5
HL_9H3G_1091/i2/13:22No text annotation
homologous
HL_5HR6_001
HL_78347.5
HL_9H3G_1101/i2/31:39No text annotation
homologous
HL_7U2J_104
HL_81376.3
HL_9H3G_1111/i2/53:61T-loop with 2 stacked bulged bases
homologous
HL_4YYE_003
HL_33597.4

Problematic loops

#loop idProblemSequence
HL_9H3G_018No text annotation
HL_9H3G_029No text annotation
HL_9H3G_082No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_9H3G_0011/3/17:23,
1/A/401:407		No text annotation
IL_22311.2
IL_9H3G_0021/3/29:30,
1/A/334:336		No text annotation
IL_14190.3
IL_9H3G_0031/3/68:69,
1/3/98:100		No text annotation
IL_28408.3
IL_9H3G_0041/3/123:127,
1/3/136:140		No text annotation
IL_87767.3
IL_9H3G_0051/3/150:151,
1/A/11:13		No text annotation
IL_97561.6
IL_9H3G_0061/3/156:158,
1/A/5:6		No text annotation
IL_97561.6
IL_9H3G_0071/3/160:162,
1/A/1:3		No text annotation
IL_01003.5
IL_9H3G_0081/A/25:26,
1/A/54:56		No text annotation
IL_15011.4
IL_9H3G_0091/A/29:36,
1/A/43:51		tSH-tHW-tHH-tHS
IL_93502.2
IL_9H3G_0101/A/80:88,
1/A/94:101		9x8 Sarcin-Ricin; G-bulge
IL_93502.2
IL_9H3G_0111/A/121:122,
1/A/142:147		No text annotation
IL_10396.2
IL_9H3G_0121/A/157:158,
1/A/257:259		No text annotation
IL_28408.3
IL_9H3G_0131/A/162:164,
1/A/252:253		No text annotation
IL_48076.9
IL_9H3G_0141/A/166:168,
1/A/244:250		No text annotation
IL_9H3G_0151/A/174:176,
1/A/234:238		No text annotation
IL_70784.2
IL_9H3G_0161/A/186:188,
1/A/201:202		No text annotation
IL_97561.6
IL_9H3G_0171/A/373:376,
1/A/387:400		No text annotation
IL_44923.2
IL_9H3G_0181/A/430:431,
1/A/636:638		No text annotation
IL_97561.6
IL_9H3G_0191/A/433:436,
1/A/633:634		No text annotation
IL_77710.2
IL_9H3G_0201/A/447:448,
1/A/486:488		No text annotation
IL_97561.6
IL_9H3G_0221/A/459:461,
1/A/472:474		No text annotation
IL_01003.5
IL_9H3G_0231/A/497:499,
1/A/627:629		No text annotation
IL_01003.5
IL_9H3G_0241/A/521:527,
1/A/550:555		No text annotation
IL_07936.1
IL_9H3G_0251/A/528:529,
1/A/547:549		No text annotation
IL_97561.6
IL_9H3G_0261/A/596:598,
1/A/605:608		No text annotation
IL_71625.4
IL_9H3G_0271/A/680:682,
1/A/801:803		No text annotation
IL_01003.5
IL_9H3G_0281/A/692:696,
1/A/709:714		No text annotation
IL_69065.2
IL_9H3G_0291/A/736:740,
1/A/749:754		No text annotation
IL_47352.3
IL_9H3G_0301/A/761:762,
1/A/788:790		No text annotation
IL_14190.3
IL_9H3G_0311/A/764:765,
1/A/784:786		No text annotation
IL_97561.6
IL_9H3G_0321/A/766:771,
1/A/778:783		No text annotation
IL_02020.1
IL_9H3G_0331/A/812:814,
1/A/947:949		No text annotation
IL_01003.5
IL_9H3G_0341/A/814:818,
1/A/940:947		No text annotation
IL_73855.2
IL_9H3G_0351/A/837:838,
1/A/904:906		No text annotation
IL_14190.3
IL_9H3G_0361/A/842:847,
1/A/864:870		No text annotation
IL_29495.2
IL_9H3G_0371/A/878:881,
1/A/897:899		No text annotation
IL_36931.3
IL_9H3G_0381/A/882:884,
1/A/895:896		No text annotation
IL_97561.6
IL_9H3G_0391/A/916:918,
1/A/928:932		No text annotation
IL_89509.2
IL_9H3G_0401/A/963:965,
1/A/974:976		No text annotation
IL_71625.4
IL_9H3G_0411/A/978:979,
1/A/1120:1122		No text annotation
IL_15011.4
IL_9H3G_0421/A/986:993,
1/A/1110:1113		No text annotation
IL_56068.1
IL_9H3G_0431/A/994:996,
1/A/1108:1109		No text annotation
IL_28408.3
IL_9H3G_0441/A/1002:1008,
1/A/1062:1068		7x7 Sarcin-Ricin with intercalated A; G-bulge
IL_94128.2
IL_9H3G_0451/A/1008:1009,
1/A/1060:1062		No text annotation
IL_34520.4
IL_9H3G_0461/A/1010:1015,
1/A/1056:1059		No text annotation
IL_16301.2
IL_9H3G_0471/A/1017:1020,
1/A/1051:1054		No text annotation
IL_71194.3
IL_9H3G_0481/A/1020:1022,
1/A/1049:1051		No text annotation
IL_01003.5
IL_9H3G_0491/A/1024:1029,
1/A/1044:1047		No text annotation
IL_74852.2
IL_9H3G_0501/A/1078:1080,
1/A/1098:1100		No text annotation
IL_71625.4
IL_9H3G_0511/A/1084:1086,
1/A/1093:1094		No text annotation
IL_28408.3
IL_9H3G_0521/A/1129:1131,
1/A/1145:1147		No text annotation
IL_01003.5
IL_9H3G_0541/A/1176:1180,
1/A/1338:1342		No text annotation
IL_08938.2
IL_9H3G_0551/A/1182:1189,
1/A/1335:1336		No text annotation
IL_11411.2
IL_9H3G_0561/A/1189:1191,
1/A/1334:1335		No text annotation
IL_97561.6
IL_9H3G_0571/A/1196:1204,
1/A/1324:1329		No text annotation
IL_39054.2
IL_9H3G_0581/A/1204:1215,
1/A/1309:1324		No text annotation
IL_34501.2
IL_9H3G_0591/A/1217:1219,
1/A/1306:1307		No text annotation
IL_97561.6
IL_9H3G_0601/A/1224:1226,
1/A/1299:1301		No text annotation
IL_01003.5
IL_9H3G_0611/A/1386:1388,
1/A/1437:1440		No text annotation
IL_42997.6
IL_9H3G_0621/A/1397:1405,
1/A/1423:1428		No text annotation
IL_9H3G_0631/A/1407:1409,
1/A/1420:1421		No text annotation
IL_14190.3
IL_9H3G_0641/A/1453:1459,
1/A/2352:2357		7x6 Sarcin-Ricin; G-bulge
IL_02666.2
IL_9H3G_0651/A/1501:1504,
1/A/1837:1838		No text annotation
IL_74641.3
IL_9H3G_0661/A/1510:1514,
1/A/1522:1524		No text annotation
IL_03866.1
IL_9H3G_0671/A/1541:1545,
1/A/1586:1591		No text annotation
IL_08938.2
IL_9H3G_0681/A/1546:1547,
1/A/1583:1585		No text annotation
IL_97561.6
IL_9H3G_0691/A/1549:1550,
1/A/1563:1565		No text annotation
IL_97561.6
IL_9H3G_0701/A/1550:1551,
1/A/1560:1563		No text annotation
IL_46637.3
IL_9H3G_0711/A/1619:1621,
1/A/1827:1828		No text annotation
IL_15011.4
IL_9H3G_0721/A/1624:1625,
1/A/1822:1824		No text annotation
IL_97561.6
IL_9H3G_0731/A/1628:1631,
1/A/1813:1819		No text annotation
IL_9H3G_0741/A/1645:1649,
1/A/1808:1812		No text annotation
IL_15190.3
IL_9H3G_0751/A/1661:1663,
1/A/1788:1790		No text annotation
IL_10892.3
IL_9H3G_0761/A/1669:1670,
1/A/1780:1782		No text annotation
IL_05642.4
IL_9H3G_0771/A/1670:1671,
1/A/1778:1780		No text annotation
IL_15011.4
IL_9H3G_0781/A/1675:1677,
1/A/1691:1693		No text annotation
IL_01003.5
IL_9H3G_0791/A/1694:1698,
1/A/1748:1753		No text annotation
IL_25943.2
IL_9H3G_0801/A/1702:1703,
1/A/1742:1744		No text annotation
IL_05642.4
IL_9H3G_0811/A/1703:1708,
1/A/1738:1742		No text annotation
IL_97112.1
IL_9H3G_0821/A/1712:1718,
1/A/1728:1734		No text annotation
IL_93476.2
IL_9H3G_0831/A/1885:1891,
1/A/2344:2347		No text annotation
IL_89862.2
IL_9H3G_0841/A/1897:1899,
1/A/2336:2338		No text annotation
IL_10432.2
IL_9H3G_0851/A/1900:1903,
1/A/2334:2335		No text annotation
IL_74641.3
IL_9H3G_0861/A/1900:1908,
1/A/2331:2335		No text annotation
IL_80252.2
IL_9H3G_0871/A/1903:1908,
1/A/2331:2334		No text annotation
IL_28217.2
IL_9H3G_0881/A/1920:1925,
1/A/1930:1936		No text annotation
IL_20700.2
IL_9H3G_0891/A/1942:1944,
1/A/2105:2107		No text annotation
IL_01003.5
IL_9H3G_0901/A/1949:1950,
1/A/2097:2100		No text annotation
IL_18824.2
IL_9H3G_0911/A/2127:2128,
1/A/2321:2323		No text annotation
IL_14190.3
IL_9H3G_0921/A/2155:2160,
1/A/2171:2178		No text annotation
IL_14684.2
IL_9H3G_0931/A/2194:2197,
1/A/2243:2244		No text annotation
IL_55206.2
IL_9H3G_0941/A/2198:2199,
1/A/2239:2242		No text annotation
IL_71421.4
IL_9H3G_0951/A/2202:2204,
1/A/2235:2236		No text annotation
IL_97561.6
IL_9H3G_0961/A/2204:2208,
1/A/2233:2235		No text annotation
IL_42776.1
IL_9H3G_0971/A/2209:2215,
1/A/2226:2232		No text annotation
IL_65359.2
IL_9H3G_0981/A/2274:2275,
1/A/2305:2308		No text annotation
IL_24886.3
IL_9H3G_0991/A/2275:2286,
1/A/2302:2305		No text annotation
IL_84014.2
IL_9H3G_1001/A/2389:2392,
1/A/2985:2987		No text annotation
IL_75527.3
IL_9H3G_1011/A/2394:2396,
1/A/2980:2983		No text annotation
IL_80025.2
IL_9H3G_1021/A/2407:2409,
1/A/2810:2811		No text annotation
IL_97561.6
IL_9H3G_1031/A/2410:2411,
1/A/2806:2809		No text annotation
IL_34520.4
IL_9H3G_1041/A/2421:2423,
1/A/2603:2606		No text annotation
IL_87316.3
IL_9H3G_1051/A/2425:2427,
1/A/2599:2601		No text annotation
IL_01003.5
IL_9H3G_1061/A/2442:2446,
1/A/2496:2501		No text annotation
IL_97112.1
IL_9H3G_1091/A/2518:2524,
1/A/2583:2586		No text annotation
IL_52092.2
IL_9H3G_1101/A/2613:2614,
1/A/2624:2626		No text annotation
IL_14190.3
IL_9H3G_1111/A/2627:2629,
1/A/2647:2649		No text annotation
IL_42997.6
IL_9H3G_1121/A/2665:2667,
1/A/2685:2689		No text annotation
IL_14250.2
IL_9H3G_1131/A/2713:2715,
1/A/2739:2740		No text annotation
IL_14190.3
IL_9H3G_1141/A/2717:2720,
1/A/2734:2737		No text annotation
IL_15225.3
IL_9H3G_1151/A/2769:2772,
1/A/2786:2787		No text annotation
IL_15011.4
IL_9H3G_1161/A/2822:2823,
1/A/2864:2866		No text annotation
IL_48076.9
IL_9H3G_1171/A/2823:2825,
1/A/2862:2864		No text annotation
IL_01003.5
IL_9H3G_1181/A/2825:2827,
1/A/2861:2862		No text annotation
IL_46637.3
IL_9H3G_1191/A/2827:2829,
1/A/2857:2861		No text annotation
IL_36931.3
IL_9H3G_1201/A/2834:2838,
1/A/2848:2852		No text annotation
IL_87767.3
IL_9H3G_1211/A/2875:2876,
1/A/2948:2950		No text annotation
IL_46637.3
IL_9H3G_1221/A/2878:2880,
1/A/2942:2946		No text annotation
IL_68118.5
IL_9H3G_1231/A/2880:2881,
1/A/2939:2942		No text annotation
IL_44609.3
IL_9H3G_1241/A/2890:2892,
1/A/2907:2911		No text annotation
IL_09353.2
IL_9H3G_1251/A/2917:2919,
1/A/2925:2927		No text annotation
IL_01003.5
IL_9H3G_1261/A/2959:2960,
1/A/2969:2971		No text annotation
IL_14190.3
IL_9H3G_1271/A/3002:3005,
1/A/3137:3141		No text annotation
IL_58355.3
IL_9H3G_1281/A/3010:3012,
1/A/3038:3040		No text annotation
IL_71625.4
IL_9H3G_1291/A/3016:3023,
1/A/3028:3034		8x7 Sarcin-Ricin; G-bulge
IL_26290.1
IL_9H3G_1301/A/3045:3049,
1/A/3089:3092		No text annotation
IL_06671.2
IL_9H3G_1311/A/3052:3057,
1/A/3082:3086		No text annotation
IL_98200.2
IL_9H3G_1321/A/3061:3062,
1/A/3075:3078		No text annotation
IL_44609.3
IL_9H3G_1331/A/3101:3105,
1/A/3125:3129		No text annotation
IL_08938.2
IL_9H3G_1341/A/3160:3162,
1/A/3269:3271		No text annotation
IL_01003.5
IL_9H3G_1351/A/3170:3172,
1/A/3199:3200		No text annotation
IL_14190.3
IL_9H3G_1361/A/3173:3181,
1/A/3193:3198		No text annotation
IL_28855.2
IL_9H3G_1371/A/3182:3184,
1/A/3190:3192		No text annotation
IL_01003.5
IL_9H3G_1381/A/3213:3219,
1/A/3244:3247		No text annotation
IL_89862.2
IL_9H3G_1391/A/3221:3225,
1/A/3238:3242		No text annotation
IL_71154.4
IL_9H3G_1401/A/3287:3290,
1/A/3298:3301		No text annotation
IL_71194.3
IL_9H3G_1411/A/3305:3307,
1/A/3375:3376		No text annotation
IL_05642.4
IL_9H3G_1421/A/3311:3312,
1/A/3368:3371		No text annotation
IL_24264.2
IL_9H3G_1431/A/3315:3317,
1/A/3360:3365		No text annotation
IL_00086.2
IL_9H3G_1441/A/3319:3324,
1/A/3354:3358		No text annotation
IL_48489.2
IL_9H3G_1451/A/3327:3329,
1/A/3350:3351		No text annotation
IL_05642.4
IL_9H3G_1461/A/3329:3332,
1/A/3347:3350		No text annotation
IL_58355.3
IL_9H3G_1471/C3/15:16,
1/C3/62:64		Single bulged U
IL_97561.6
IL_9H3G_1481/C3/20:27,
1/C3/52:58		No text annotation
IL_01750.1
IL_9H3G_1491/C3/28:29,
1/C3/48:51		Major groove minor groove platform; mini C-loop
IL_73108.3
IL_9H3G_1501/C3/32:36,
1/C3/41:45		Symmetric double minor groove platform
IL_58103.13
IL_9H3G_1511/C3/70:78,
1/C3/98:105		No text annotation
IL_9H3G_1521/C3/79:81,
1/C3/95:97		Isolated non-canonical cWW pair
IL_71625.4
IL_9H3G_1531/C3/83:85,
1/C3/92:93		Single bulged U
IL_97561.6
IL_9H3G_1541/W2/4:6,
1/W2/67:69		No text annotation
homologous
IL_7VNV_001
NA
IL_9H3G_1551/h1/24:26,
1/h1/602:603		No text annotation
IL_05642.4
IL_9H3G_1561/h1/35:37,
1/h1/473:475		No text annotation
IL_01003.5
IL_9H3G_1571/h1/37:41,
1/h1/468:473		No text annotation
IL_12697.2
IL_9H3G_1581/h1/42:48,
1/h1/433:435		No text annotation
IL_88082.3
IL_9H3G_1591/h1/50:52,
1/h1/430:431		No text annotation
IL_34520.4
IL_9H3G_1601/h1/58:63,
1/h1/88:90		No text annotation
IL_61299.7
IL_9H3G_1611/h1/64:69,
1/h1/83:87		No text annotation
IL_21667.3
IL_9H3G_1621/h1/110:113,
1/h1/304:307		No text annotation
IL_71194.3
IL_9H3G_1631/h1/114:117,
1/h1/302:303		No text annotation
IL_71421.4
IL_9H3G_1641/h1/118:123,
1/h1/297:301		No text annotation
IL_31545.2
IL_9H3G_1651/h1/141:147,
1/h1/163:170		No text annotation
IL_24485.2
IL_9H3G_1661/h1/147:150,
1/h1/160:163		No text annotation
IL_37443.1
IL_9H3G_1681/h1/201:202,
1/h1/262:264		No text annotation
IL_14190.3
IL_9H3G_1691/h1/202:203,
1/h1/260:262		No text annotation
IL_05642.4
IL_9H3G_1701/h1/203:205,
1/h1/258:260		No text annotation
IL_71625.4
IL_9H3G_1711/h1/266:268,
1/h1/290:291		No text annotation
IL_14190.3
IL_9H3G_1721/h1/271:274,
1/h1/285:287		No text annotation
IL_15698.6
IL_9H3G_1731/h1/313:318,
1/h1/350:357		No text annotation
IL_46174.5
IL_9H3G_1741/h1/320:325,
1/h1/347:348		No text annotation
IL_01372.2
IL_9H3G_1751/h1/365:367,
1/h1/378:383		No text annotation
IL_93336.2
IL_9H3G_1761/h1/391:393,
1/h1/408:410		No text annotation
IL_10892.3
IL_9H3G_1771/h1/413:415,
1/h1/422:424		No text annotation
IL_42997.6
IL_9H3G_1781/h1/441:443,
1/h1/465:466		No text annotation
IL_97561.6
IL_9H3G_1791/h1/445:449,
1/h1/462:463		No text annotation
IL_26900.2
IL_9H3G_1801/h1/449:450,
1/h1/460:462		No text annotation
IL_28408.3
IL_9H3G_1811/h1/483:484,
1/h1/507:509		No text annotation
IL_14190.3
IL_9H3G_1821/h1/516:518,
1/h1/538:545		No text annotation
IL_02511.2
IL_9H3G_1831/h1/519:520,
1/h1/535:537		No text annotation
IL_34520.4
IL_9H3G_1841/h1/520:522,
1/h1/534:535		No text annotation
IL_34520.4
IL_9H3G_1851/h1/552:559,
1/h1/589:590		No text annotation
IL_11411.2
IL_9H3G_1861/h1/559:561,
1/h1/588:589		No text annotation
IL_97561.6
IL_9H3G_1871/h1/564:570,
1/h1/577:585		No text annotation
IL_52042.2
IL_9H3G_1881/h1/616:618,
1/h1/1106:1108		No text annotation
IL_01003.5
IL_9H3G_1891/h1/618:624,
1/h1/1105:1106		No text annotation
IL_20847.2
IL_9H3G_1901/h1/626:628,
1/h1/974:976		No text annotation
IL_01003.5
IL_9H3G_1911/h1/629:633,
1/h1/969:973		No text annotation
IL_05821.2
IL_9H3G_1921/h1/749:750,
1/h1/805:808		No text annotation
IL_73108.3
IL_9H3G_1931/h1/751:753,
1/h1/802:804		No text annotation
IL_71625.4
IL_9H3G_1941/h1/754:762,
1/h1/794:801		No text annotation
IL_59049.3
IL_9H3G_1971/h1/866:867,
1/h1/963:966		No text annotation
IL_74641.3
IL_9H3G_1981/h1/869:871,
1/h1/958:961		No text annotation
IL_01003.5
IL_9H3G_1991/h1/872:875,
1/h1/954:957		No text annotation
IL_15225.3
IL_9H3G_2001/h1/875:879,
1/h1/951:954		No text annotation
IL_15225.3
IL_9H3G_2011/h1/886:889,
1/h1/925:928		No text annotation
IL_15225.3
IL_9H3G_2021/h1/896:900,
1/h1/911:918		No text annotation
IL_71972.2
IL_9H3G_2031/h1/986:991,
1/h1/1015:1017		No text annotation
IL_31359.2
IL_9H3G_2041/h1/991:995,
1/h1/1011:1015		No text annotation
IL_05821.2
IL_9H3G_2051/h1/1035:1037,
1/h1/1096:1102		No text annotation
IL_82706.3
IL_9H3G_2061/h1/1042:1045,
1/h1/1075:1078		No text annotation
IL_15225.3
IL_9H3G_2071/h1/1052:1054,
1/h1/1067:1068		No text annotation
IL_15011.4
IL_9H3G_2081/h1/1056:1058,
1/h1/1064:1065		No text annotation
IL_28408.3
IL_9H3G_2091/h1/1112:1119,
1/h1/1130:1135		8x6 Sarcin-Ricin with inserted Y; G-bulge
IL_84044.2
IL_9H3G_2101/h1/1147:1148,
1/h1/1632:1634		No text annotation
IL_14190.3
IL_9H3G_2111/h1/1150:1152,
1/h1/1629:1630		No text annotation
IL_28408.3
IL_9H3G_2121/h1/1158:1161,
1/h1/1619:1623		No text annotation
IL_63596.13
IL_9H3G_2131/h1/1174:1176,
1/h1/1467:1469		No text annotation
IL_01003.5
IL_9H3G_2141/h1/1179:1180,
1/h1/1462:1464		No text annotation
IL_34520.4
IL_9H3G_2151/h1/1214:1216,
1/h1/1451:1453		No text annotation
IL_01003.5
IL_9H3G_2161/h1/1225:1234,
1/h1/1253:1260		No text annotation
IL_06668.1
IL_9H3G_2171/h1/1235:1237,
1/h1/1250:1252		No text annotation
IL_38565.3
IL_9H3G_2181/h1/1269:1271,
1/h1/1443:1444		No text annotation
IL_97561.6
IL_9H3G_2191/h1/1273:1277,
1/h1/1439:1441		No text annotation
IL_82453.2
IL_9H3G_2201/h1/1273:1279,
1/h1/1433:1441		No text annotation
IL_99893.2
IL_9H3G_2211/h1/1277:1279,
1/h1/1433:1439		No text annotation
IL_09439.1
IL_9H3G_2221/h1/1281:1282,
1/h1/1429:1431		No text annotation
IL_14190.3
IL_9H3G_2231/h1/1291:1293,
1/h1/1324:1326		No text annotation
IL_10892.3
IL_9H3G_2241/h1/1307:1309,
1/h1/1318:1319		No text annotation
IL_34520.4
IL_9H3G_2251/h1/1340:1343,
1/h1/1386:1388		No text annotation
IL_01003.5
IL_9H3G_2261/h1/1346:1349,
1/h1/1380:1383		No text annotation
IL_78800.3
IL_9H3G_2271/h1/1352:1354,
1/h1/1373:1377		No text annotation
IL_01003.5
IL_9H3G_2281/h1/1392:1395,
1/h1/1409:1415		No text annotation
IL_32376.2
IL_9H3G_2291/h1/1480:1482,
1/h1/1530:1532		No text annotation
IL_71625.4
IL_9H3G_2301/h1/1482:1490,
1/h1/1522:1530		No text annotation
IL_9H3G_2311/h1/1499:1501,
1/h1/1512:1514		No text annotation
IL_71625.4
IL_9H3G_2321/h1/1542:1547,
1/h1/1568:1573		No text annotation
IL_57885.3
IL_9H3G_2331/h1/1638:1640,
1/h1/1768:1771		No text annotation
IL_18228.2
IL_9H3G_2341/h1/1640:1643,
1/h1/1764:1768		No text annotation
IL_25873.3
IL_9H3G_2351/h1/1644:1646,
1/h1/1761:1763		No text annotation
IL_01003.5
IL_9H3G_2361/h1/1646:1648,
1/h1/1758:1761		No text annotation
IL_29925.3
IL_9H3G_2371/h1/1652:1654,
1/h1/1752:1754		No text annotation
IL_01003.5
IL_9H3G_2381/h1/1655:1658,
1/h1/1748:1751		No text annotation
IL_58355.3
IL_9H3G_2391/h1/1658:1660,
1/h1/1747:1748		No text annotation
IL_97561.6
IL_9H3G_2401/h1/1666:1669,
1/h1/1738:1741		No text annotation
IL_71194.3
IL_9H3G_2411/h1/1671:1674,
1/h1/1733:1736		No text annotation
IL_58355.3
IL_9H3G_2421/h1/1677:1680,
1/h1/1727:1730		No text annotation
IL_71194.3
IL_9H3G_2431/h1/1680:1684,
1/h1/1723:1727		No text annotation
IL_15190.3
IL_9H3G_2441/i2/4:6,
1/i2/67:69		No text annotation
homologous
IL_7VNV_001
NA

Problematic loops

#loop idProblemSequence
IL_9H3G_021No text annotation
IL_9H3G_053No text annotation
IL_9H3G_107No text annotation
IL_9H3G_108No text annotation
IL_9H3G_167No text annotation
IL_9H3G_195No text annotation
IL_9H3G_196No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_9H3G_0011/3/23:24,
1/A/366:373,
1/A/400:401		No text annotation
J3_68715.2
J3_9H3G_0021/3/23:24,
1/A/366:376,
1/A/387:401		No text annotation
J3_17917.2
J3_9H3G_0031/3/25:28,
1/A/337:353,
1/A/360:365		No text annotation
J3_07616.2
J3_9H3G_0041/3/48:49,
1/3/62:68,
1/3/100:104		No text annotation
J3_01004.2
J3_9H3G_0051/A/111:121,
1/A/147:156,
1/A/260:264		No text annotation
J3_69230.2
J3_9H3G_0061/A/111:122,
1/A/142:156,
1/A/260:264		No text annotation
J3_98114.2
J3_9H3G_0071/A/181:186,
1/A/202:211,
1/A/223:229		No text annotation
J3_9H3G_0081/A/433:440,
1/A/495:497,
1/A/629:634		No text annotation
J3_9H3G_0091/A/436:440,
1/A/495:497,
1/A/629:633		No text annotation
J3_9H3G_0101/A/505:507,
1/A/569:579,
1/A/616:621		No text annotation
J3_9H3G_0111/A/585:586,
1/A/595:596,
1/A/608:610		No text annotation
J3_9H3G_0121/A/823:829,
1/A/914:916,
1/A/932:935		No text annotation
J3_46658.2
J3_9H3G_0131/A/838:840,
1/A/872:876,
1/A/901:904		No text annotation
J3_69816.2
J3_9H3G_0141/A/997:998,
1/A/1072:1076,
1/A/1102:1107		No text annotation
J3_84137.2
J3_9H3G_0151/A/1488:1494,
1/A/1859:1861,
1/A/1873:1876		No text annotation
J3_05025.2
J3_9H3G_0161/A/1497:1500,
1/A/1839:1845,
1/A/1854:1856		No text annotation
J3_76012.2
J3_9H3G_0171/A/1535:1540,
1/A/1592:1596,
1/A/1613:1614		No text annotation
J3_94309.2
J3_9H3G_0181/A/1547:1549,
1/A/1565:1569,
1/A/1579:1583		No text annotation
J3_9H3G_0191/A/1631:1632,
1/A/1641:1645,
1/A/1812:1813		No text annotation
J3_05348.2
J3_9H3G_0201/A/1654:1658,
1/A/1793:1794,
1/A/1798:1803		No text annotation
J3_08594.2
J3_9H3G_0211/A/2429:2433,
1/A/2510:2514,
1/A/2590:2597		No text annotation
J3_9H3G_0221/A/2650:2652,
1/A/2753:2764,
1/A/2792:2797		No text annotation
J3_04772.2
J3_9H3G_0231/A/2663:2665,
1/A/2689:2691,
1/A/2700:2705		No text annotation
J3_05327.2
J3_9H3G_0241/A/2885:2888,
1/A/2913:2915,
1/A/2929:2935		No text annotation
J3_44047.2
J3_9H3G_0251/A/3163:3170,
1/A/3200:3211,
1/A/3249:3268		No text annotation
J3_9H3G_0261/A/3285:3287,
1/A/3301:3305,
1/A/3376:3379		No text annotation
J3_40896.1
J3_9H3G_0271/C3/9:14,
1/C3/65:66,
1/C3/109:110		No text annotation
J3_26985.2
J3_9H3G_0281/h1/41:42,
1/h1/435:441,
1/h1/466:468		No text annotation
J3_58657.2
J3_9H3G_0291/h1/41:48,
1/h1/433:441,
1/h1/466:468		No text annotation
J3_63856.2
J3_9H3G_0301/h1/635:637,
1/h1/862:866,
1/h1/966:967		No text annotation
J3_01633.2
J3_9H3G_0311/h1/635:637,
1/h1/862:867,
1/h1/963:967		No text annotation
J3_17385.6
J3_9H3G_0321/h1/763:766,
1/h1/776:778,
1/h1/787:793		No text annotation
J3_97642.3
J3_9H3G_0331/h1/882:885,
1/h1/929:937,
1/h1/944:948		No text annotation
J3_23895.2
J3_9H3G_0341/h1/1038:1040,
1/h1/1080:1084,
1/h1/1091:1095		No text annotation
J3_9H3G_0351/h1/1162:1165,
1/h1/1583:1589,
1/h1/1611:1618		No text annotation
J3_85722.2
J3_9H3G_0361/h1/1169:1172,
1/h1/1471:1473,
1/h1/1576:1579		No text annotation
J3_44359.2
J3_9H3G_0371/h1/1181:1188,
1/h1/1199:1210,
1/h1/1457:1461		No text annotation
J3_88451.2
J3_9H3G_0381/h1/1216:1221,
1/h1/1264:1268,
1/h1/1445:1451		No text annotation
J3_87797.3
J3_9H3G_0391/h1/1284:1289,
1/h1/1328:1333,
1/h1/1422:1427		No text annotation
J3_17077.2
J3_9H3G_0401/h1/1294:1295,
1/h1/1304:1307,
1/h1/1319:1323		No text annotation
J3_76043.5
J3_9H3G_0411/h1/1337:1339,
1/h1/1389:1392,
1/h1/1415:1418		No text annotation
J3_82365.6
J3_9H3G_0421/h1/1337:1339,
1/h1/1389:1395,
1/h1/1409:1418		No text annotation
J3_40706.2
J3_9H3G_0431/h1/1473:1477,
1/h1/1535:1542,
1/h1/1573:1576		No text annotation
J3_03192.2
J4_9H3G_0011/A/110:111,
1/A/264:269,
1/A/290:296,
1/A/313:316		No text annotation
J4_94698.2
J4_9H3G_0021/A/181:186,
1/A/202:205,
1/A/209:211,
1/A/223:229		No text annotation
J4_9H3G_0031/A/1460:1466,
1/A/1484:1485,
1/A/1879:1882,
1/A/2350:2351		No text annotation
J4_34212.2
J4_9H3G_0041/A/1501:1505,
1/A/1529:1534,
1/A/1615:1616,
1/A/1831:1838		No text annotation
J4_77353.2
J4_9H3G_0051/A/1504:1505,
1/A/1529:1534,
1/A/1615:1616,
1/A/1831:1837		No text annotation
J4_48150.2
J4_9H3G_0061/A/1674:1675,
1/A/1693:1694,
1/A/1753:1754,
1/A/1774:1775		No text annotation
J4_75575.2
J4_9H3G_0071/A/2129:2133,
1/A/2145:2149,
1/A/2184:2188,
1/A/2315:2320		No text annotation
J4_78485.2
J4_9H3G_0081/A/2190:2192,
1/A/2246:2247,
1/A/2265:2274,
1/A/2308:2313		No text annotation
J4_42306.2
J4_9H3G_0091/A/2653:2657,
1/A/2711:2713,
1/A/2740:2741,
1/A/2750:2752		No text annotation
J4_9H3G_0101/A/2653:2657,
1/A/2711:2715,
1/A/2739:2741,
1/A/2750:2752		No text annotation
J4_59590.2
J4_9H3G_0111/A/3008:3010,
1/A/3040:3041,
1/A/3096:3098,
1/A/3132:3134		No text annotation
J4_37757.2
J4_9H3G_0121/W2/7:10,
1/W2/25:27,
1/W2/43:49,
1/W2/65:66		tRNA junction
homologous
J4_5AXM_001
J4_95067.1
J4_9H3G_0131/h1/100:108,
1/h1/309:311,
1/h1/359:363,
1/h1/385:386		No text annotation
J4_15241.3
J4_9H3G_0141/h1/624:626,
1/h1/976:981,
1/h1/1022:1033,
1/h1/1104:1105		No text annotation
J4_14595.2
J4_9H3G_0151/i2/7:10,
1/i2/25:27,
1/i2/43:49,
1/i2/65:66		tRNA junction
homologous
J4_6UFH_001
J4_95067.1
J5_9H3G_0011/3/39:46,
1/3/106:111,
1/3/119:120,
1/3/143:145,
1/A/18:20		No text annotation
J5_27223.2
J5_9H3G_0021/A/670:675,
1/A/808:811,
1/A/950:953,
1/A/1385:1386,
1/A/1440:1446		No text annotation
J5_08384.2
J5_9H3G_0031/A/687:690,
1/A/716:720,
1/A/727:732,
1/A/758:760,
1/A/791:796		No text annotation
J5_9H3G_0041/A/1908:1916,
1/A/1940:1941,
1/A/2108:2109,
1/A/2113:2121,
1/A/2329:2331		No text annotation
J5_99177.2
J5_9H3G_0051/A/2397:2404,
1/A/2814:2822,
1/A/2866:2875,
1/A/2950:2956,
1/A/2974:2979		No text annotation
J5_83685.1
J5_9H3G_0061/A/2414:2417,
1/A/2610:2613,
1/A/2626:2627,
1/A/2649:2650,
1/A/2797:2803		No text annotation
J5_96125.2
J5_9H3G_0071/h1/31:35,
1/h1/475:481,
1/h1/511:516,
1/h1/545:548,
1/h1/594:597		No text annotation
J5_04786.2
J5_9H3G_0081/h1/31:35,
1/h1/475:481,
1/h1/511:518,
1/h1/538:548,
1/h1/594:597		No text annotation
J5_02492.3
J5_9H3G_0091/h1/54:57,
1/h1/91:98,
1/h1/388:390,
1/h1/411:413,
1/h1/424:428		No text annotation
J5_58574.2
J5_9H3G_0101/h1/127:140,
1/h1/171:182,
1/h1/198:201,
1/h1/264:266,
1/h1/291:293		No text annotation
J5_9H3G_0111/h1/127:140,
1/h1/171:182,
1/h1/198:201,
1/h1/264:268,
1/h1/290:293		No text annotation
J6_9H3G_0011/3/36:39,
1/A/20:25,
1/A/56:66,
1/A/73:77,
1/A/104:108,
1/A/318:328		No text annotation
J6_18219.2
J6_9H3G_0021/A/2414:2417,
1/A/2610:2613,
1/A/2626:2627,
1/A/2649:2652,
1/A/2753:2764,
1/A/2792:2803		No text annotation
J6_84807.2
J7_9H3G_0011/A/958:963,
1/A/976:977,
1/A/1123:1126,
1/A/1150:1155,
1/A/1166:1170,
1/A/1348:1349,
1/A/1375:1380		No text annotation
J7_60081.2

Problematic loops

No problematic loops


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