HL_9H3G_017

3D structure

PDB id

9H3G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

1.82 Å

Loop

Sequence

CUUUUGAUACG

Length

11 nucleotides

Bulged bases

9H3G|1|A|G|538

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3G|1|A|C|533
9H3G|1|A|U|534
9H3G|1|A|U|535
9H3G|1|A|U|536
9H3G|1|A|U|537
9H3G|1|A|G|538
9H3G|1|A|A|539
9H3G|1|A|U|540
9H3G|1|A|A|541
9H3G|1|A|C|542
9H3G|1|A|G|543

Current chains

Chain A

Ribosomal RNA 25S

Nearby chains

Chain AH

Large ribosomal subunit protein eL14y

Chain AL

Ribosomal protein L18ae/LX family protein